RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 ATAD3CQ5T2N8 411 aa2.54□□□□□ -2
SNHG1-202ENST00000535689 WDR25Q64LD2 544 aaPredicted RBP2.54□□□□□ -2
SNHG1-202ENST00000535689 DMKNQ6E0U4 476 aaPredicted RBP2.54□□□□□ -2
SNHG1-202ENST00000535689 Q6ZR54 194 aa2.54□□□□□ -2
SNHG1-202ENST00000535689 LANCL3Q6ZV70 420 aa2.54□□□□□ -2
SNHG1-202ENST00000535689 LUZP2Q86TE4 346 aa2.54□□□□□ -2
SNHG1-202ENST00000535689 LINC00523Q86TU6 105 aa2.54□□□□□ -2
SNHG1-202ENST00000535689 LRRC6Q86X45 466 aa2.54□□□□□ -2
SNHG1-202ENST00000535689 C2orf73Q8N5S3 287 aaPredicted RBP2.54□□□□□ -2
SNHG1-202ENST00000535689 CLDN19Q8N6F1 224 aa2.54□□□□□ -2
SNHG1-202ENST00000535689 ARL6IP6Q8N6S5 226 aa2.54□□□□□ -2
SNHG1-202ENST00000535689 LINC01555Q8NAE3 123 aa2.54□□□□□ -2
SNHG1-202ENST00000535689 OR9A1PQ8NGU1 263 aa2.54□□□□□ -2
SNHG1-202ENST00000535689 OR9A4Q8NGU2 314 aa2.54□□□□□ -2
SNHG1-202ENST00000535689 OR4Q3Q8NH05 313 aa2.54□□□□□ -2
SNHG1-202ENST00000535689 SLC22A8Q8TCC7 542 aa2.54□□□□□ -2
SNHG1-202ENST00000535689 ANKRD49Q8WVL7 239 aa2.54□□□□□ -2
SNHG1-202ENST00000535689 C16orf45Q96MC5 204 aaPredicted RBP2.54□□□□□ -2
SNHG1-202ENST00000535689 WFIKKN1Q96NZ8 548 aa2.54□□□□□ -2
SNHG1-202ENST00000535689 OR2A5Q96R48 311 aa2.54□□□□□ -2
SNHG1-202ENST00000535689 PEBP4Q96S96 227 aa2.54□□□□□ -2
SNHG1-202ENST00000535689 NPAS2Q99743 824 aa2.54□□□□□ -2
SNHG1-202ENST00000535689 SIRPDQ9H106 197 aa2.54□□□□□ -2
SNHG1-202ENST00000535689 OPN3Q9H1Y3 402 aaPredicted RBP2.54□□□□□ -2
SNHG1-202ENST00000535689 HSD3B7Q9H2F3 369 aa2.54□□□□□ -2
SNHG1-202ENST00000535689 ALG9Q9H6U8 611 aa2.54□□□□□ -2
SNHG1-202ENST00000535689 NLE1Q9NVX2 485 aaPredicted RBP2.54□□□□□ -2
SNHG1-202ENST00000535689 RDH8Q9NYR8 311 aa2.54□□□□□ -2
SNHG1-202ENST00000535689 C6orf203Q9P0P8 240 aaPredicted RBP2.54□□□□□ -2
SNHG1-202ENST00000535689 ARMCX1Q9P291 453 aa2.54□□□□□ -2
SNHG1-202ENST00000535689 ARL5AQ9Y689 179 aa2.54□□□□□ -2
SNHG1-202ENST00000535689 MAD1L1Q9Y6D9 718 aa2.54□□□□□ -2
SNHG1-202ENST00000535689 MEGF8Q7Z7M0 2845 aa2.54□□□□□ -2
SNHG1-202ENST00000535689 TRBV11-1A0A0K0K1C0 115 aa2.53□□□□□ -2
SNHG1-202ENST00000535689 A0A0U1RRA0 63 aa2.53□□□□□ -2
SNHG1-202ENST00000535689 TMEM89A2RUT3 159 aa2.53□□□□□ -2
SNHG1-202ENST00000535689 FBLL1A6NHQ2 334 aaKnown RBP2.53□□□□□ -2
SNHG1-202ENST00000535689 AP3B1O00203 1094 aa2.53□□□□□ -2
SNHG1-202ENST00000535689 NDUFS8O00217 210 aa2.53□□□□□ -2
SNHG1-202ENST00000535689 CBR3O75828 277 aa2.53□□□□□ -2
SNHG1-202ENST00000535689 OR2J2O76002 312 aa2.53□□□□□ -2
SNHG1-202ENST00000535689 C1orf105O95561 183 aa2.53□□□□□ -2
SNHG1-202ENST00000535689 IFNA16P05015 189 aa2.53□□□□□ -2
SNHG1-202ENST00000535689 MELTFP08582 738 aa2.53□□□□□ -2
SNHG1-202ENST00000535689 ANXA4P09525 319 aaPredicted RBP2.53□□□□□ -2
SNHG1-202ENST00000535689 SDC1P18827 310 aa2.53□□□□□ -2
SNHG1-202ENST00000535689 USF1P22415 310 aaPredicted RBP2.53□□□□□ -2
SNHG1-202ENST00000535689 PEBP1P30086 187 aaKnown RBP2.53□□□□□ -2
SNHG1-202ENST00000535689 UGT2B10P36537 528 aa2.53□□□□□ -2
SNHG1-202ENST00000535689 ARHGDIBP52566 201 aa2.53□□□□□ -2
SNHG1-202ENST00000535689 SLC25A1P53007 311 aa2.53□□□□□ -2
SNHG1-202ENST00000535689 HTD2P86397 168 aa2.53□□□□□ -2
SNHG1-202ENST00000535689 CHRNB3Q05901 458 aa2.53□□□□□ -2
SNHG1-202ENST00000535689 KLHL30Q0D2K2 578 aa2.53□□□□□ -2
SNHG1-202ENST00000535689 CYLC2Q14093 348 aaPredicted RBP2.53□□□□□ -2
SNHG1-202ENST00000535689 CAPRIN1Q14444 709 aaKnown RBP2.53□□□□□ -2
SNHG1-202ENST00000535689 BCL2A1Q16548 175 aa2.53□□□□□ -2
SNHG1-202ENST00000535689 Q1RN00 199 aa2.53□□□□□ -2
SNHG1-202ENST00000535689 C17orf58Q2M2W7 97 aa2.53□□□□□ -2
SNHG1-202ENST00000535689 ZNF658BQ4V348 819 aaPredicted RBP2.53□□□□□ -2
SNHG1-202ENST00000535689 EIPR1Q53HC9 387 aa2.53□□□□□ -2
SNHG1-202ENST00000535689 PIGGQ5H8A4 983 aa2.53□□□□□ -2
SNHG1-202ENST00000535689 FAM120AOSQ5T036 256 aa2.53□□□□□ -2
SNHG1-202ENST00000535689 LEMD1Q68G75 181 aa2.53□□□□□ -2
SNHG1-202ENST00000535689 PTRHD1Q6GMV3 140 aaKnown RBP2.53□□□□□ -2
SNHG1-202ENST00000535689 H2AFVQ71UI9 128 aa2.53□□□□□ -2
SNHG1-202ENST00000535689 IFNEQ86WN2 208 aa2.53□□□□□ -2
SNHG1-202ENST00000535689 PIANPQ8IYJ0 282 aa2.53□□□□□ -2
SNHG1-202ENST00000535689 LRRC25Q8N386 305 aaPredicted RBP2.53□□□□□ -2
SNHG1-202ENST00000535689 ZSCAN4Q8NAM6 433 aaPredicted RBP2.53□□□□□ -2
SNHG1-202ENST00000535689 APCDD1LQ8NCL9 501 aa2.53□□□□□ -2
SNHG1-202ENST00000535689 NFAM1Q8NET5 270 aaPredicted RBP2.53□□□□□ -2
SNHG1-202ENST00000535689 IPMKQ8NFU5 416 aa2.53□□□□□ -2
SNHG1-202ENST00000535689 RFESDQ8TAC1 157 aa2.53□□□□□ -2
SNHG1-202ENST00000535689 PAQR8Q8TEZ7 354 aa2.53□□□□□ -2
SNHG1-202ENST00000535689 PEX13Q92968 403 aa2.53□□□□□ -2
SNHG1-202ENST00000535689 MCHR2Q969V1 340 aa2.53□□□□□ -2
SNHG1-202ENST00000535689 TM4SF19Q96DZ7 209 aa2.53□□□□□ -2
SNHG1-202ENST00000535689 C11orf24Q96F05 449 aaPredicted RBP2.53□□□□□ -2
SNHG1-202ENST00000535689 SDSLQ96GA7 329 aa2.53□□□□□ -2
SNHG1-202ENST00000535689 CAPZA3Q96KX2 299 aa2.53□□□□□ -2
SNHG1-202ENST00000535689 SAMD8Q96LT4 415 aa2.53□□□□□ -2
SNHG1-202ENST00000535689 TBCDQ9BTW9 1192 aa2.53□□□□□ -2
SNHG1-202ENST00000535689 CCDC28BQ9BUN5 200 aa2.53□□□□□ -2
SNHG1-202ENST00000535689 FAM96AQ9H5X1 160 aa2.53□□□□□ -2
SNHG1-202ENST00000535689 EML4Q9HC35 981 aaKnown RBP2.53□□□□□ -2
SNHG1-202ENST00000535689 MYOZ1Q9NP98 299 aaPredicted RBP2.53□□□□□ -2
SNHG1-202ENST00000535689 NANSQ9NR45 359 aa2.53□□□□□ -2
SNHG1-202ENST00000535689 PNO1Q9NRX1 252 aaKnown RBP2.53□□□□□ -2
SNHG1-202ENST00000535689 FARSBQ9NSD9 589 aaKnown RBP2.53□□□□□ -2
SNHG1-202ENST00000535689 TAS2R3Q9NYW6 316 aa2.53□□□□□ -2
SNHG1-202ENST00000535689 EHFQ9NZC4 300 aa2.53□□□□□ -2
SNHG1-202ENST00000535689 ACTR3BQ9P1U1 418 aa2.53□□□□□ -2
SNHG1-202ENST00000535689 UVRAGQ9P2Y5 699 aa2.53□□□□□ -2
SNHG1-202ENST00000535689 ABCD2Q9UBJ2 740 aa2.53□□□□□ -2
SNHG1-202ENST00000535689 PCYOX1Q9UHG3 505 aa2.53□□□□□ -2
SNHG1-202ENST00000535689 RSPH14Q9UHP6 348 aa2.53□□□□□ -2
SNHG1-202ENST00000535689 ANAPC7Q9UJX3 599 aa2.53□□□□□ -2
SNHG1-202ENST00000535689 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.53□□□□□ -2
SNHG1-202ENST00000535689 EXOSC1Q9Y3B2 195 aaKnown RBP2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms