RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 UBAP1Q9NZ09 502 aa9.38□□□□□ -0.91
CLSTN3-206ENST00000535668 OR5V1Q9UGF6 321 aa9.38□□□□□ -0.91
CLSTN3-206ENST00000535668 SIGLEC7Q9Y286 467 aa9.38□□□□□ -0.91
CLSTN3-206ENST00000535668 ELOVL7A1L3X0 281 aa9.37□□□□□ -0.91
CLSTN3-206ENST00000535668 ISPDA4D126 451 aa9.37□□□□□ -0.91
CLSTN3-206ENST00000535668 CDC42EP2O14613 210 aa9.37□□□□□ -0.91
CLSTN3-206ENST00000535668 TNFRSF13BO14836 293 aaPredicted RBP9.37□□□□□ -0.91
CLSTN3-206ENST00000535668 DOK2O60496 412 aa9.37□□□□□ -0.91
CLSTN3-206ENST00000535668 IFNW1P05000 195 aa9.37□□□□□ -0.91
CLSTN3-206ENST00000535668 LIPFP07098 398 aa9.37□□□□□ -0.91
CLSTN3-206ENST00000535668 TNFRSF1BP20333 461 aa9.37□□□□□ -0.91
CLSTN3-206ENST00000535668 FUT4P22083 530 aa9.37□□□□□ -0.91
CLSTN3-206ENST00000535668 SDHAP31040 664 aa9.37□□□□□ -0.91
CLSTN3-206ENST00000535668 SRP9P49458 86 aaKnown RBP9.37□□□□□ -0.91
CLSTN3-206ENST00000535668 NPY4RP50391 375 aa9.37□□□□□ -0.91
CLSTN3-206ENST00000535668 RAD23AP54725 363 aa9.37□□□□□ -0.91
CLSTN3-206ENST00000535668 COX10Q12887 443 aa9.37□□□□□ -0.91
CLSTN3-206ENST00000535668 MAPRE2Q15555 327 aa9.37□□□□□ -0.91
CLSTN3-206ENST00000535668 CCDC92Q53HC0 331 aaPredicted RBP9.37□□□□□ -0.91
CLSTN3-206ENST00000535668 C8orf82Q6P1X6 216 aaPredicted RBP9.37□□□□□ -0.91
CLSTN3-206ENST00000535668 BTNL3Q6UXE8 466 aa9.37□□□□□ -0.91
CLSTN3-206ENST00000535668 ZNF841Q6ZN19 808 aa9.37□□□□□ -0.91
CLSTN3-206ENST00000535668 TSEN54Q7Z6J9 526 aaKnown RBP9.37□□□□□ -0.91
CLSTN3-206ENST00000535668 ARPINQ7Z6K5 226 aa9.37□□□□□ -0.91
CLSTN3-206ENST00000535668 KLBQ86Z14 1044 aa9.37□□□□□ -0.91
CLSTN3-206ENST00000535668 MICU2Q8IYU8 434 aa9.37□□□□□ -0.91
CLSTN3-206ENST00000535668 PARP8Q8N3A8 854 aa9.37□□□□□ -0.91
CLSTN3-206ENST00000535668 OR2T12Q8NG77 320 aa9.37□□□□□ -0.91
CLSTN3-206ENST00000535668 OR2Z1Q8NG97 314 aa9.37□□□□□ -0.91
CLSTN3-206ENST00000535668 ITLN1Q8WWA0 313 aa9.37□□□□□ -0.91
CLSTN3-206ENST00000535668 C22orf15Q8WYQ4 148 aa9.37□□□□□ -0.91
CLSTN3-206ENST00000535668 NEIL1Q96FI4 390 aaPredicted RBP9.37□□□□□ -0.91
CLSTN3-206ENST00000535668 PLEKHA8Q96JA3 519 aa9.37□□□□□ -0.91
CLSTN3-206ENST00000535668 MEGF10Q96KG7 1140 aa9.37□□□□□ -0.91
CLSTN3-206ENST00000535668 SSBP3Q9BWW4 388 aaPredicted RBP9.37□□□□□ -0.91
CLSTN3-206ENST00000535668 C1QTNF5Q9BXJ0 243 aa9.37□□□□□ -0.91
CLSTN3-206ENST00000535668 HDHD2Q9H0R4 259 aa9.37□□□□□ -0.91
CLSTN3-206ENST00000535668 POFUT1Q9H488 388 aa9.37□□□□□ -0.91
CLSTN3-206ENST00000535668 SAR1AQ9NR31 198 aa9.37□□□□□ -0.91
CLSTN3-206ENST00000535668 GID8Q9NWU2 228 aa9.37□□□□□ -0.91
CLSTN3-206ENST00000535668 GRHPRQ9UBQ7 328 aa9.37□□□□□ -0.91
CLSTN3-206ENST00000535668 TMEM5Q9Y2B1 443 aa9.37□□□□□ -0.91
CLSTN3-206ENST00000535668 POMT1Q9Y6A1 747 aa9.37□□□□□ -0.91
CLSTN3-206ENST00000535668 TRAV27A0A087WT01 109 aa9.36□□□□□ -0.91
CLSTN3-206ENST00000535668 EFCAB9A8MZ26 197 aa9.36□□□□□ -0.91
CLSTN3-206ENST00000535668 SRRM5B3KS81 715 aa9.36□□□□□ -0.91
CLSTN3-206ENST00000535668 IMPA2O14732 288 aa9.36□□□□□ -0.91
CLSTN3-206ENST00000535668 ARPC3O15145 178 aa9.36□□□□□ -0.91
CLSTN3-206ENST00000535668 PIP5K1CO60331 668 aa9.36□□□□□ -0.91
CLSTN3-206ENST00000535668 IGHV4-38-2P0DP08 117 aa9.36□□□□□ -0.91
CLSTN3-206ENST00000535668 SELEP16581 610 aa9.36□□□□□ -0.91
CLSTN3-206ENST00000535668 CD200P41217 278 aa9.36□□□□□ -0.91
CLSTN3-206ENST00000535668 HTR5AP47898 357 aa9.36□□□□□ -0.91
CLSTN3-206ENST00000535668 ECH1Q13011 328 aa9.36□□□□□ -0.91
CLSTN3-206ENST00000535668 DCDC5Q6ZRR9 648 aa9.36□□□□□ -0.91
CLSTN3-206ENST00000535668 CBLL1Q75N03 491 aa9.36□□□□□ -0.91
CLSTN3-206ENST00000535668 C1orf87Q8N0U7 546 aa9.36□□□□□ -0.91
CLSTN3-206ENST00000535668 FITM2Q8N6M3 262 aa9.36□□□□□ -0.91
CLSTN3-206ENST00000535668 GJC3Q8NFK1 279 aa9.36□□□□□ -0.91
CLSTN3-206ENST00000535668 OR51A7Q8NH64 312 aa9.36□□□□□ -0.91
CLSTN3-206ENST00000535668 SLC7A13Q8TCU3 470 aa9.36□□□□□ -0.91
CLSTN3-206ENST00000535668 DYDC1Q8WWB3 177 aa9.36□□□□□ -0.91
CLSTN3-206ENST00000535668 ZBTB9Q96C00 473 aa9.36□□□□□ -0.91
CLSTN3-206ENST00000535668 DHRS1Q96LJ7 313 aa9.36□□□□□ -0.91
CLSTN3-206ENST00000535668 ZNF582Q96NG8 517 aaPredicted RBP9.36□□□□□ -0.91
CLSTN3-206ENST00000535668 CITED1Q99966 193 aa9.36□□□□□ -0.91
CLSTN3-206ENST00000535668 TMEM246Q9BRR3 403 aa9.36□□□□□ -0.91
CLSTN3-206ENST00000535668 FNDC11Q9BVV2 318 aa9.36□□□□□ -0.91
CLSTN3-206ENST00000535668 NDEL1Q9GZM8 345 aa9.36□□□□□ -0.91
CLSTN3-206ENST00000535668 MS4A7Q9GZW8 240 aaPredicted RBP9.36□□□□□ -0.91
CLSTN3-206ENST00000535668 FAM107BQ9H098 131 aa9.36□□□□□ -0.91
CLSTN3-206ENST00000535668 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.36□□□□□ -0.91
CLSTN3-206ENST00000535668 SNX13Q9Y5W8 968 aa9.36□□□□□ -0.91
CLSTN3-206ENST00000535668 A0A0G2JK05 382 aa9.35□□□□□ -0.91
CLSTN3-206ENST00000535668 A0A0G2JND7 137 aa9.35□□□□□ -0.91
CLSTN3-206ENST00000535668 LRRC30A6NM36 301 aa9.35□□□□□ -0.91
CLSTN3-206ENST00000535668 XKRYO14609 159 aa9.35□□□□□ -0.91
CLSTN3-206ENST00000535668 MRASO14807 208 aa9.35□□□□□ -0.91
CLSTN3-206ENST00000535668 MLNRO43193 412 aa9.35□□□□□ -0.91
CLSTN3-206ENST00000535668 KHDRBS3O75525 346 aaKnown RBP9.35□□□□□ -0.91
CLSTN3-206ENST00000535668 NDUFB2O95178 105 aa9.35□□□□□ -0.91
CLSTN3-206ENST00000535668 PPP1R3DO95685 299 aa9.35□□□□□ -0.91
CLSTN3-206ENST00000535668 FXYD6P3P58550 94 aa9.35□□□□□ -0.91
CLSTN3-206ENST00000535668 KLF10Q13118 480 aa9.35□□□□□ -0.91
CLSTN3-206ENST00000535668 TOP3AQ13472 1001 aaPredicted RBP9.35□□□□□ -0.91
CLSTN3-206ENST00000535668 Q6YL49 198 aa9.35□□□□□ -0.91
CLSTN3-206ENST00000535668 DPY19L2P2Q6ZN68 376 aa9.35□□□□□ -0.91
CLSTN3-206ENST00000535668 ZNF771Q7L3S4 317 aaPredicted RBP9.35□□□□□ -0.91
CLSTN3-206ENST00000535668 NLRC3Q7RTR2 1065 aa9.35□□□□□ -0.91
CLSTN3-206ENST00000535668 SLC15A3Q8IY34 581 aa9.35□□□□□ -0.91
CLSTN3-206ENST00000535668 WFDC12Q8WWY7 111 aa9.35□□□□□ -0.91
CLSTN3-206ENST00000535668 TMIGD2Q96BF3 282 aa9.35□□□□□ -0.91
CLSTN3-206ENST00000535668 FAM71F1Q96KD3 344 aaPredicted RBP9.35□□□□□ -0.91
CLSTN3-206ENST00000535668 Q96M85 177 aa9.35□□□□□ -0.91
CLSTN3-206ENST00000535668 FUZQ9BT04 418 aa9.35□□□□□ -0.91
CLSTN3-206ENST00000535668 SLC22A4Q9H015 551 aa9.35□□□□□ -0.91
CLSTN3-206ENST00000535668 EMC7Q9NPA0 242 aa9.35□□□□□ -0.91
CLSTN3-206ENST00000535668 ASH2LQ9UBL3 628 aa9.35□□□□□ -0.91
CLSTN3-206ENST00000535668 ADAM18Q9Y3Q7 739 aa9.35□□□□□ -0.91
CLSTN3-206ENST00000535668 IGLV1-36A0A0B4J1U3 117 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms