RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 USP9YO00507 2555 aaPredicted RBP13.5□□□□□ -0.25
CNN1-202ENST00000535659 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.5□□□□□ -0.25
CNN1-202ENST00000535659 C5orf49A4QMS7 147 aa13.5□□□□□ -0.25
CNN1-202ENST00000535659 DEFB108AA8MXU0 73 aa13.5□□□□□ -0.25
CNN1-202ENST00000535659 CRYAAP02489 173 aa13.5□□□□□ -0.25
CNN1-202ENST00000535659 H2BFMP0C1H6 154 aa13.5□□□□□ -0.25
CNN1-202ENST00000535659 CCL2P13500 99 aa13.5□□□□□ -0.25
CNN1-202ENST00000535659 ZNF35P13682 527 aa13.5□□□□□ -0.25
CNN1-202ENST00000535659 CCNOP22674 350 aa13.5□□□□□ -0.25
CNN1-202ENST00000535659 OPRL1P41146 370 aa13.5□□□□□ -0.25
CNN1-202ENST00000535659 GALK2Q01415 458 aa13.5□□□□□ -0.25
CNN1-202ENST00000535659 NAAAQ02083 359 aa13.5□□□□□ -0.25
CNN1-202ENST00000535659 ZNF85Q03923 595 aa13.5□□□□□ -0.25
CNN1-202ENST00000535659 EGR3Q06889 387 aa13.5□□□□□ -0.25
CNN1-202ENST00000535659 BSPH1Q075Z2 132 aa13.5□□□□□ -0.25
CNN1-202ENST00000535659 TBC1D28Q2M2D7 210 aa13.5□□□□□ -0.25
CNN1-202ENST00000535659 SSX6Q7RTT6 188 aa13.5□□□□□ -0.25
CNN1-202ENST00000535659 LHFPL3Q86UP9 236 aa13.5□□□□□ -0.25
CNN1-202ENST00000535659 ZNF679Q8IYX0 411 aa13.5□□□□□ -0.25
CNN1-202ENST00000535659 STX19Q8N4C7 294 aa13.5□□□□□ -0.25
CNN1-202ENST00000535659 RFLNBQ8N5W9 214 aa13.5□□□□□ -0.25
CNN1-202ENST00000535659 SNX33Q8WV41 574 aa13.5□□□□□ -0.25
CNN1-202ENST00000535659 SLC7A6Q92536 515 aa13.5□□□□□ -0.25
CNN1-202ENST00000535659 OR8B4Q96RC9 309 aa13.5□□□□□ -0.25
CNN1-202ENST00000535659 JAM3Q9BX67 310 aa13.5□□□□□ -0.25
CNN1-202ENST00000535659 SLCO1C1Q9NYB5 712 aa13.5□□□□□ -0.25
CNN1-202ENST00000535659 PRR14LQ5THK1 2151 aa13.5□□□□□ -0.25
CNN1-202ENST00000535659 ANKHD1Q8IWZ3 2542 aaKnown RBP13.5□□□□□ -0.25
CNN1-202ENST00000535659 PRR32B1ATL7 298 aa13.49□□□□□ -0.25
CNN1-202ENST00000535659 F5H5K5 113 aa13.49□□□□□ -0.25
CNN1-202ENST00000535659 PSMD9O00233 223 aa13.49□□□□□ -0.25
CNN1-202ENST00000535659 ZNF254O75437 659 aa13.49□□□□□ -0.25
CNN1-202ENST00000535659 DBHP09172 617 aa13.49□□□□□ -0.25
CNN1-202ENST00000535659 COX6B1P14854 86 aa13.49□□□□□ -0.25
CNN1-202ENST00000535659 NR1H2P55055 460 aa13.49□□□□□ -0.25
CNN1-202ENST00000535659 GRB2P62993 217 aaKnown RBP13.49□□□□□ -0.25
CNN1-202ENST00000535659 SLC35A2P78381 396 aa13.49□□□□□ -0.25
CNN1-202ENST00000535659 MVKQ03426 396 aa13.49□□□□□ -0.25
CNN1-202ENST00000535659 GALEQ14376 348 aa13.49□□□□□ -0.25
CNN1-202ENST00000535659 KRTAP27-1Q3LI81 207 aa13.49□□□□□ -0.25
CNN1-202ENST00000535659 LRRN1Q6UXK5 716 aa13.49□□□□□ -0.25
CNN1-202ENST00000535659 KCTD20Q7Z5Y7 419 aa13.49□□□□□ -0.25
CNN1-202ENST00000535659 SPTSSAQ969W0 71 aa13.49□□□□□ -0.25
CNN1-202ENST00000535659 MYCBPQ99417 103 aaPredicted RBP13.49□□□□□ -0.25
CNN1-202ENST00000535659 KCNJ15Q99712 375 aa13.49□□□□□ -0.25
CNN1-202ENST00000535659 ZNF649Q9BS31 505 aa13.49□□□□□ -0.25
CNN1-202ENST00000535659 ELOVL3Q9HB03 270 aa13.49□□□□□ -0.25
CNN1-202ENST00000535659 CDH20Q9HBT6 801 aa13.49□□□□□ -0.25
CNN1-202ENST00000535659 CHCHD3Q9NX63 227 aaKnown RBP13.49□□□□□ -0.25
CNN1-202ENST00000535659 ERVK13-1Q9NX77 482 aa13.49□□□□□ -0.25
CNN1-202ENST00000535659 PLEKHB1Q9UF11 243 aaPredicted RBP13.49□□□□□ -0.25
CNN1-202ENST00000535659 IKZF2Q9UKS7 526 aa13.49□□□□□ -0.25
CNN1-202ENST00000535659 BLOC1S6Q9UL45 172 aa13.49□□□□□ -0.25
CNN1-202ENST00000535659 LRCH1Q9Y2L9 728 aa13.49□□□□□ -0.25
CNN1-202ENST00000535659 IGHV2OR16-5A0A0B4J2B6 119 aa13.49□□□□□ -0.25
CNN1-202ENST00000535659 MAGEB4O15481 346 aaPredicted RBP13.49□□□□□ -0.25
CNN1-202ENST00000535659 SIAH2O43255 324 aa13.49□□□□□ -0.25
CNN1-202ENST00000535659 SULT1C4O75897 302 aa13.49□□□□□ -0.25
CNN1-202ENST00000535659 CDK1P06493 297 aa13.49□□□□□ -0.25
CNN1-202ENST00000535659 CD3EP07766 207 aa13.49□□□□□ -0.25
CNN1-202ENST00000535659 ADRA2AP08913 450 aa13.49□□□□□ -0.25
CNN1-202ENST00000535659 COL8A1P27658 744 aa13.49□□□□□ -0.25
CNN1-202ENST00000535659 C21orf33P30042 268 aaPredicted RBP13.49□□□□□ -0.25
CNN1-202ENST00000535659 CALCRP30988 508 aa13.49□□□□□ -0.25
CNN1-202ENST00000535659 TPTEP56180 551 aa13.49□□□□□ -0.25
CNN1-202ENST00000535659 ZNF684Q5T5D7 378 aa13.49□□□□□ -0.25
CNN1-202ENST00000535659 PLEKHG7Q6ZR37 379 aa13.49□□□□□ -0.25
CNN1-202ENST00000535659 EGFL6Q8IUX8 553 aa13.49□□□□□ -0.25
CNN1-202ENST00000535659 PAQR4Q8N4S7 273 aaPredicted RBP13.49□□□□□ -0.25
CNN1-202ENST00000535659 PIK3IP1Q96FE7 263 aa13.49□□□□□ -0.25
CNN1-202ENST00000535659 MRPL48Q96GC5 212 aaKnown RBP13.49□□□□□ -0.25
CNN1-202ENST00000535659 RADILQ96JH8 1075 aa13.49□□□□□ -0.25
CNN1-202ENST00000535659 DCLRE1CQ96SD1 692 aaKnown RBP13.49□□□□□ -0.25
CNN1-202ENST00000535659 KCNS3Q9BQ31 491 aa13.49□□□□□ -0.25
CNN1-202ENST00000535659 TTTY10Q9BZA0 68 aa13.49□□□□□ -0.25
CNN1-202ENST00000535659 NIPAL2Q9H841 368 aa13.49□□□□□ -0.25
CNN1-202ENST00000535659 PAK1IP1Q9NWT1 392 aaPredicted RBP13.49□□□□□ -0.25
CNN1-202ENST00000535659 ERVK-18Q9QC07 812 aa13.49□□□□□ -0.25
CNN1-202ENST00000535659 EIF3KQ9UBQ5 218 aaKnown RBP13.49□□□□□ -0.25
CNN1-202ENST00000535659 MRM2Q9UI43 246 aaKnown RBP13.49□□□□□ -0.25
CNN1-202ENST00000535659 EXOSC1Q9Y3B2 195 aaKnown RBP13.49□□□□□ -0.25
CNN1-202ENST00000535659 GRIP1Q9Y3R0 1128 aa13.49□□□□□ -0.25
CNN1-202ENST00000535659 METTL15A6NJ78 407 aa13.48□□□□□ -0.25
CNN1-202ENST00000535659 ABCD4O14678 606 aa13.48□□□□□ -0.25
CNN1-202ENST00000535659 APOC1P02654 83 aa13.48□□□□□ -0.25
CNN1-202ENST00000535659 KRT8P05787 483 aa13.48□□□□□ -0.25
CNN1-202ENST00000535659 LIMS3P0CW19 117 aa13.48□□□□□ -0.25
CNN1-202ENST00000535659 LIMS4P0CW20 117 aa13.48□□□□□ -0.25
CNN1-202ENST00000535659 MYL12AP19105 171 aa13.48□□□□□ -0.25
CNN1-202ENST00000535659 HSD11B1P28845 292 aa13.48□□□□□ -0.25
CNN1-202ENST00000535659 OTX1P32242 354 aaPredicted RBP13.48□□□□□ -0.25
CNN1-202ENST00000535659 DCTDP32321 178 aa13.48□□□□□ -0.25
CNN1-202ENST00000535659 ETV1P50549 477 aa13.48□□□□□ -0.25
CNN1-202ENST00000535659 PRKXP51817 358 aa13.48□□□□□ -0.25
CNN1-202ENST00000535659 CDONQ4KMG0 1287 aa13.48□□□□□ -0.25
CNN1-202ENST00000535659 ARL9Q6T311 187 aa13.48□□□□□ -0.25
CNN1-202ENST00000535659 NAA40Q86UY6 237 aa13.48□□□□□ -0.25
CNN1-202ENST00000535659 PIAS4Q8N2W9 510 aaPredicted RBP13.48□□□□□ -0.25
CNN1-202ENST00000535659 C4orf45Q96LM5 186 aa13.48□□□□□ -0.25
CNN1-202ENST00000535659 ALG8Q9BVK2 526 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms