RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 NKAIN1Q4KMZ8 207 aa11.51□□□□□ -0.57
SPG11-203ENST00000535302 USP51Q70EK9 711 aa11.51□□□□□ -0.57
SPG11-203ENST00000535302 CHRNA9Q9UGM1 479 aa11.51□□□□□ -0.57
SPG11-203ENST00000535302 ING1Q9UK53 422 aaPredicted RBP11.51□□□□□ -0.57
SPG11-203ENST00000535302 TRAPPC4Q9Y296 219 aa11.51□□□□□ -0.57
SPG11-203ENST00000535302 MEIKINA0A087WXM9 373 aa11.51□□□□□ -0.57
SPG11-203ENST00000535302 C2CD4DB7Z1M9 353 aa11.51□□□□□ -0.57
SPG11-203ENST00000535302 QDPRP09417 244 aa11.51□□□□□ -0.57
SPG11-203ENST00000535302 LRP11Q86VZ4 500 aa11.51□□□□□ -0.57
SPG11-203ENST00000535302 ROBO4Q8WZ75 1007 aa11.51□□□□□ -0.57
SPG11-203ENST00000535302 FCRL1Q96LA6 429 aa11.51□□□□□ -0.57
SPG11-203ENST00000535302 PSD2Q9BQI7 771 aa11.51□□□□□ -0.57
SPG11-203ENST00000535302 LRFN3Q9BTN0 628 aa11.51□□□□□ -0.57
SPG11-203ENST00000535302 UBQLN3Q9H347 655 aa11.51□□□□□ -0.57
SPG11-203ENST00000535302 EXO1Q9UQ84 846 aaKnown RBP11.51□□□□□ -0.57
SPG11-203ENST00000535302 HS3ST3A1Q9Y663 406 aa11.51□□□□□ -0.57
SPG11-203ENST00000535302 IGLV3-10A0A075B6K4 115 aa11.51□□□□□ -0.57
SPG11-203ENST00000535302 WNT11O96014 354 aa11.51□□□□□ -0.57
SPG11-203ENST00000535302 METAP1P53582 386 aa11.51□□□□□ -0.57
SPG11-203ENST00000535302 PPIAP62937 165 aaKnown RBP11.51□□□□□ -0.57
SPG11-203ENST00000535302 ZNF90Q03938 601 aa11.51□□□□□ -0.57
SPG11-203ENST00000535302 FAM74A1Q5RGS3 127 aa11.51□□□□□ -0.57
SPG11-203ENST00000535302 MOB3BQ86TA1 216 aa11.51□□□□□ -0.57
SPG11-203ENST00000535302 NAXDQ8IW45 347 aa11.51□□□□□ -0.57
SPG11-203ENST00000535302 PELI3Q8N2H9 469 aa11.51□□□□□ -0.57
SPG11-203ENST00000535302 SLC22A24Q8N4F4 322 aa11.51□□□□□ -0.57
SPG11-203ENST00000535302 ACY3Q96HD9 319 aa11.51□□□□□ -0.57
SPG11-203ENST00000535302 CCDC74BQ96LY2 380 aa11.51□□□□□ -0.57
SPG11-203ENST00000535302 EXOSC3Q9NQT5 275 aaKnown RBP11.51□□□□□ -0.57
SPG11-203ENST00000535302 B3GAT1Q9P2W7 334 aa11.51□□□□□ -0.57
SPG11-203ENST00000535302 GPR55Q9Y2T6 319 aaPredicted RBP11.51□□□□□ -0.57
SPG11-203ENST00000535302 SHISA8B8ZZ34 492 aa11.51□□□□□ -0.57
SPG11-203ENST00000535302 TMPRSS11DO60235 418 aa11.51□□□□□ -0.57
SPG11-203ENST00000535302 PAPLNO95428 1278 aa11.51□□□□□ -0.57
SPG11-203ENST00000535302 GPR12P47775 334 aa11.51□□□□□ -0.57
SPG11-203ENST00000535302 H1FNTQ75WM6 255 aaPredicted RBP11.51□□□□□ -0.57
SPG11-203ENST00000535302 WDR5BQ86VZ2 330 aa11.51□□□□□ -0.57
SPG11-203ENST00000535302 TGIF2LXQ8IUE1 241 aa11.51□□□□□ -0.57
SPG11-203ENST00000535302 ORAI1Q96D31 301 aa11.51□□□□□ -0.57
SPG11-203ENST00000535302 C11orf54Q9H0W9 315 aaPredicted RBP11.51□□□□□ -0.57
SPG11-203ENST00000535302 SAGE1Q9NXZ1 904 aa11.51□□□□□ -0.57
SPG11-203ENST00000535302 CHST2Q9Y4C5 530 aa11.51□□□□□ -0.57
SPG11-203ENST00000535302 A0A0D9SG52 128 aa11.51□□□□□ -0.57
SPG11-203ENST00000535302 MED19A0JLT2 244 aaPredicted RBP11.51□□□□□ -0.57
SPG11-203ENST00000535302 ZNF785A8K8V0 405 aa11.51□□□□□ -0.57
SPG11-203ENST00000535302 SPRY3O43610 288 aa11.51□□□□□ -0.57
SPG11-203ENST00000535302 NQO2P16083 231 aa11.51□□□□□ -0.57
SPG11-203ENST00000535302 CNR1P21554 472 aa11.51□□□□□ -0.57
SPG11-203ENST00000535302 H3F3AP84243 136 aa11.51□□□□□ -0.57
SPG11-203ENST00000535302 DUSP6Q16828 381 aa11.51□□□□□ -0.57
SPG11-203ENST00000535302 ACSM6Q6P461 480 aa11.51□□□□□ -0.57
SPG11-203ENST00000535302 RFPL4BQ6ZWI9 263 aa11.51□□□□□ -0.57
SPG11-203ENST00000535302 KCND3Q9UK17 655 aa11.51□□□□□ -0.57
SPG11-203ENST00000535302 TCRBV5S1A1TA0A578 114 aa11.51□□□□□ -0.57
SPG11-203ENST00000535302 TNFSF15O95150 251 aa11.51□□□□□ -0.57
SPG11-203ENST00000535302 SULT1A3P0DMM9 295 aa11.51□□□□□ -0.57
SPG11-203ENST00000535302 SULT1A4P0DMN0 295 aa11.51□□□□□ -0.57
SPG11-203ENST00000535302 MRPL19P49406 292 aaKnown RBP11.51□□□□□ -0.57
SPG11-203ENST00000535302 TUSC1Q2TAM9 212 aa11.51□□□□□ -0.57
SPG11-203ENST00000535302 OR51F2Q8NH61 342 aa11.51□□□□□ -0.57
SPG11-203ENST00000535302 SLC35E1Q96K37 410 aa11.51□□□□□ -0.57
SPG11-203ENST00000535302 IKZF5Q9H5V7 419 aa11.51□□□□□ -0.57
SPG11-203ENST00000535302 TMEM221A6NGB7 291 aa11.5□□□□□ -0.57
SPG11-203ENST00000535302 VAMP3Q15836 100 aa11.5□□□□□ -0.57
SPG11-203ENST00000535302 ACOT7LQ6ZUV0 252 aa11.5□□□□□ -0.57
SPG11-203ENST00000535302 RPS19BP1Q86WX3 136 aaKnown RBP11.5□□□□□ -0.57
SPG11-203ENST00000535302 SLC24A4Q8NFF2 622 aa11.5□□□□□ -0.57
SPG11-203ENST00000535302 OR2M7Q8NG81 312 aa11.5□□□□□ -0.57
SPG11-203ENST00000535302 SLCO4A1Q96BD0 722 aa11.5□□□□□ -0.57
SPG11-203ENST00000535302 TIAM2Q8IVF5 1701 aa11.5□□□□□ -0.57
SPG11-203ENST00000535302 HIST1H1CP16403 213 aaKnown RBP11.5□□□□□ -0.57
SPG11-203ENST00000535302 MAP2K6P52564 334 aa11.5□□□□□ -0.57
SPG11-203ENST00000535302 KIAA0141Q14154 515 aaPredicted RBP11.5□□□□□ -0.57
SPG11-203ENST00000535302 AVPI1Q5T686 147 aa11.5□□□□□ -0.57
SPG11-203ENST00000535302 Q6ZS52 159 aa11.5□□□□□ -0.57
SPG11-203ENST00000535302 OR10V1Q8NGI7 309 aa11.5□□□□□ -0.57
SPG11-203ENST00000535302 ZNF2Q9BSG1 426 aaPredicted RBP11.5□□□□□ -0.57
SPG11-203ENST00000535302 SPACA1Q9HBV2 294 aa11.5□□□□□ -0.57
SPG11-203ENST00000535302 ZNF346Q9UL40 294 aaKnown RBP11.5□□□□□ -0.57
SPG11-203ENST00000535302 TOPAZ1Q8N9V7 1692 aa11.5□□□□□ -0.57
SPG11-203ENST00000535302 SLC16A6O15403 523 aa11.5□□□□□ -0.57
SPG11-203ENST00000535302 C19orf57Q0VDD7 668 aa11.5□□□□□ -0.57
SPG11-203ENST00000535302 DHRS7BQ6IAN0 325 aaPredicted RBP11.5□□□□□ -0.57
SPG11-203ENST00000535302 RTL6Q6ICC9 239 aa11.5□□□□□ -0.57
SPG11-203ENST00000535302 SPNS3Q6ZMD2 512 aa11.5□□□□□ -0.57
SPG11-203ENST00000535302 FAM109AQ8N4B1 249 aa11.5□□□□□ -0.57
SPG11-203ENST00000535302 OR10Z1Q8NGY1 313 aa11.5□□□□□ -0.57
SPG11-203ENST00000535302 KCNG3Q8TAE7 436 aa11.5□□□□□ -0.57
SPG11-203ENST00000535302 EVPLQ92817 2033 aa11.5□□□□□ -0.57
SPG11-203ENST00000535302 DIMT1Q9UNQ2 313 aaKnown RBP11.5□□□□□ -0.57
SPG11-203ENST00000535302 IDSB3KWA1 339 aa11.5□□□□□ -0.57
SPG11-203ENST00000535302 PXDC1Q5TGL8 231 aa11.5□□□□□ -0.57
SPG11-203ENST00000535302 SEMA6DQ8NFY4 1073 aa11.5□□□□□ -0.57
SPG11-203ENST00000535302 BOD1Q96IK1 185 aa11.5□□□□□ -0.57
SPG11-203ENST00000535302 STACQ99469 402 aa11.5□□□□□ -0.57
SPG11-203ENST00000535302 MMACHCQ9Y4U1 282 aa11.5□□□□□ -0.57
SPG11-203ENST00000535302 CNTRLQ7Z7A1 2325 aa11.5□□□□□ -0.57
SPG11-203ENST00000535302 GOSR1O95249 250 aa11.5□□□□□ -0.57
SPG11-203ENST00000535302 SMIM17P0DL12 118 aa11.5□□□□□ -0.57
SPG11-203ENST00000535302 OR10A3P58181 314 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms