RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 SCP2D1Q9UJQ7 156 aa10.89□□□□□ -0.67
SCARB1-204ENST00000535005 ZNF346Q9UL40 294 aaKnown RBP10.89□□□□□ -0.67
SCARB1-204ENST00000535005 IER3IP1Q9Y5U9 82 aa10.89□□□□□ -0.67
SCARB1-204ENST00000535005 FLVCR1Q9Y5Y0 555 aa10.89□□□□□ -0.67
SCARB1-204ENST00000535005 CACNG2Q9Y698 323 aa10.89□□□□□ -0.67
SCARB1-204ENST00000535005 ZGRF1Q86YA3 2104 aa10.89□□□□□ -0.67
SCARB1-204ENST00000535005 MEIKINA0A087WXM9 373 aa10.88□□□□□ -0.67
SCARB1-204ENST00000535005 SS18L1O75177 396 aaPredicted RBP10.88□□□□□ -0.67
SCARB1-204ENST00000535005 LIMS3P0CW19 117 aa10.88□□□□□ -0.67
SCARB1-204ENST00000535005 LIMS4P0CW20 117 aa10.88□□□□□ -0.67
SCARB1-204ENST00000535005 IFNGR1P15260 489 aa10.88□□□□□ -0.67
SCARB1-204ENST00000535005 SDHAP31040 664 aa10.88□□□□□ -0.67
SCARB1-204ENST00000535005 TIMP3P35625 211 aa10.88□□□□□ -0.67
SCARB1-204ENST00000535005 GALEQ14376 348 aa10.88□□□□□ -0.67
SCARB1-204ENST00000535005 GUSBP1Q15486 140 aa10.88□□□□□ -0.67
SCARB1-204ENST00000535005 TMEM65Q6PI78 240 aa10.88□□□□□ -0.67
SCARB1-204ENST00000535005 PLXDC2Q6UX71 529 aa10.88□□□□□ -0.67
SCARB1-204ENST00000535005 SEM1Q6ZVN7 128 aa10.88□□□□□ -0.67
SCARB1-204ENST00000535005 TPRA1Q86W33 373 aa10.88□□□□□ -0.67
SCARB1-204ENST00000535005 UBE2J2Q8N2K1 259 aa10.88□□□□□ -0.67
SCARB1-204ENST00000535005 C9orf106Q8NAJ2 232 aa10.88□□□□□ -0.67
SCARB1-204ENST00000535005 ZNF519Q8TB69 540 aa10.88□□□□□ -0.67
SCARB1-204ENST00000535005 ASB10Q8WXI3 467 aa10.88□□□□□ -0.67
SCARB1-204ENST00000535005 TMEM45BQ96B21 275 aa10.88□□□□□ -0.67
SCARB1-204ENST00000535005 GMPPAQ96IJ6 420 aaPredicted RBP10.88□□□□□ -0.67
SCARB1-204ENST00000535005 ADAD1Q96M93 576 aaKnown RBP10.88□□□□□ -0.67
SCARB1-204ENST00000535005 ZFP3Q96NJ6 502 aa10.88□□□□□ -0.67
SCARB1-204ENST00000535005 ERMAPQ96PL5 475 aaPredicted RBP10.88□□□□□ -0.67
SCARB1-204ENST00000535005 TSPAN32Q96QS1 320 aa10.88□□□□□ -0.67
SCARB1-204ENST00000535005 OR51J1Q9H342 316 aa10.88□□□□□ -0.67
SCARB1-204ENST00000535005 C12orf4Q9NQ89 552 aa10.88□□□□□ -0.67
SCARB1-204ENST00000535005 EXTL2Q9UBQ6 330 aa10.88□□□□□ -0.67
SCARB1-204ENST00000535005 RCE1Q9Y256 329 aa10.88□□□□□ -0.67
SCARB1-204ENST00000535005 EXOGQ9Y2C4 368 aaKnown RBP10.88□□□□□ -0.67
SCARB1-204ENST00000535005 ADAM18Q9Y3Q7 739 aa10.88□□□□□ -0.67
SCARB1-204ENST00000535005 MAB21L2Q9Y586 359 aa10.88□□□□□ -0.67
SCARB1-204ENST00000535005 NPTNQ9Y639 398 aa10.88□□□□□ -0.67
SCARB1-204ENST00000535005 FAM208BQ5VWN6 2430 aa10.88□□□□□ -0.67
SCARB1-204ENST00000535005 TRIM77I1YAP6 450 aa10.88□□□□□ -0.67
SCARB1-204ENST00000535005 GABRPO00591 440 aa10.88□□□□□ -0.67
SCARB1-204ENST00000535005 RGS9O75916 674 aaPredicted RBP10.88□□□□□ -0.67
SCARB1-204ENST00000535005 IGHA1P01876 353 aa10.88□□□□□ -0.67
SCARB1-204ENST00000535005 CRHP06850 196 aa10.88□□□□□ -0.67
SCARB1-204ENST00000535005 ZP3P21754 424 aa10.88□□□□□ -0.67
SCARB1-204ENST00000535005 CA7P43166 264 aa10.88□□□□□ -0.67
SCARB1-204ENST00000535005 PITPNBP48739 271 aa10.88□□□□□ -0.67
SCARB1-204ENST00000535005 GBX2P52951 348 aaPredicted RBP10.88□□□□□ -0.67
SCARB1-204ENST00000535005 SNAPC1Q16533 368 aa10.88□□□□□ -0.67
SCARB1-204ENST00000535005 EIF2S3LQ2VIR3 472 aaKnown RBP10.88□□□□□ -0.67
SCARB1-204ENST00000535005 MCEMP1Q8IX19 187 aa10.88□□□□□ -0.67
SCARB1-204ENST00000535005 ZNF843Q8N446 348 aa10.88□□□□□ -0.67
SCARB1-204ENST00000535005 IQCF1Q8N6M8 205 aa10.88□□□□□ -0.67
SCARB1-204ENST00000535005 SYT14Q8NB59 555 aa10.88□□□□□ -0.67
SCARB1-204ENST00000535005 OR6X1Q8NH79 312 aa10.88□□□□□ -0.67
SCARB1-204ENST00000535005 Q96M85 177 aa10.88□□□□□ -0.67
SCARB1-204ENST00000535005 ZNF385AQ96PM9 386 aaKnown RBP10.88□□□□□ -0.67
SCARB1-204ENST00000535005 THAP7Q9BT49 309 aaPredicted RBP10.88□□□□□ -0.67
SCARB1-204ENST00000535005 WACQ9BTA9 647 aa10.88□□□□□ -0.67
SCARB1-204ENST00000535005 CMC2Q9NRP2 79 aa10.88□□□□□ -0.67
SCARB1-204ENST00000535005 GRHPRQ9UBQ7 328 aa10.88□□□□□ -0.67
SCARB1-204ENST00000535005 SESN1Q9Y6P5 492 aa10.88□□□□□ -0.67
SCARB1-204ENST00000535005 NBASA2RRP1 2371 aa10.87□□□□□ -0.67
SCARB1-204ENST00000535005 A6NIZ1 184 aa10.87□□□□□ -0.67
SCARB1-204ENST00000535005 E9PLN8 166 aa10.87□□□□□ -0.67
SCARB1-204ENST00000535005 PRAF2O60831 178 aa10.87□□□□□ -0.67
SCARB1-204ENST00000535005 TSC22D2O75157 780 aa10.87□□□□□ -0.67
SCARB1-204ENST00000535005 ZNF432O94892 652 aa10.87□□□□□ -0.67
SCARB1-204ENST00000535005 PLGP00747 810 aaPredicted RBP10.87□□□□□ -0.67
SCARB1-204ENST00000535005 SULT1A3P0DMM9 295 aa10.87□□□□□ -0.67
SCARB1-204ENST00000535005 SULT1A4P0DMN0 295 aa10.87□□□□□ -0.67
SCARB1-204ENST00000535005 GLI4P10075 376 aa10.87□□□□□ -0.67
SCARB1-204ENST00000535005 NPR2P20594 1047 aa10.87□□□□□ -0.67
SCARB1-204ENST00000535005 CEACAM8P31997 349 aaPredicted RBP10.87□□□□□ -0.67
SCARB1-204ENST00000535005 CASP6P55212 293 aa10.87□□□□□ -0.67
SCARB1-204ENST00000535005 CLDN17P56750 224 aa10.87□□□□□ -0.67
SCARB1-204ENST00000535005 RAP1BP61224 184 aa10.87□□□□□ -0.67
SCARB1-204ENST00000535005 RAP1AP62834 184 aa10.87□□□□□ -0.67
SCARB1-204ENST00000535005 PITPNAQ00169 270 aa10.87□□□□□ -0.67
SCARB1-204ENST00000535005 RIPPLY2Q5TAB7 128 aa10.87□□□□□ -0.67
SCARB1-204ENST00000535005 EEF1A1P5Q5VTE0 462 aa10.87□□□□□ -0.67
SCARB1-204ENST00000535005 GLCCI1Q86VQ1 547 aa10.87□□□□□ -0.67
SCARB1-204ENST00000535005 TUSC5Q8IXB3 177 aa10.87□□□□□ -0.67
SCARB1-204ENST00000535005 GATAD2BQ8WXI9 593 aa10.87□□□□□ -0.67
SCARB1-204ENST00000535005 SLC25A44Q96H78 314 aaPredicted RBP10.87□□□□□ -0.67
SCARB1-204ENST00000535005 DDOQ99489 341 aa10.87□□□□□ -0.67
SCARB1-204ENST00000535005 VKORC1Q9BQB6 163 aa10.87□□□□□ -0.67
SCARB1-204ENST00000535005 ABCG5Q9H222 651 aa10.87□□□□□ -0.67
SCARB1-204ENST00000535005 PARPBPQ9NWS1 579 aa10.87□□□□□ -0.67
SCARB1-204ENST00000535005 MED29Q9NX70 200 aa10.87□□□□□ -0.67
SCARB1-204ENST00000535005 TINAGQ9UJW2 476 aa10.87□□□□□ -0.67
SCARB1-204ENST00000535005 TEX13CA0A0J9YWL9 993 aa10.86□□□□□ -0.67
SCARB1-204ENST00000535005 ANKRD61A6NGH8 418 aa10.86□□□□□ -0.67
SCARB1-204ENST00000535005 SMLR1H3BR10 107 aa10.86□□□□□ -0.67
SCARB1-204ENST00000535005 SURF4O15260 269 aa10.86□□□□□ -0.67
SCARB1-204ENST00000535005 C1QL1O75973 258 aa10.86□□□□□ -0.67
SCARB1-204ENST00000535005 TOXO94900 526 aa10.86□□□□□ -0.67
SCARB1-204ENST00000535005 NTF4P34130 210 aa10.86□□□□□ -0.67
SCARB1-204ENST00000535005 ACVR1BP36896 505 aa10.86□□□□□ -0.67
SCARB1-204ENST00000535005 BIDP55957 195 aa10.86□□□□□ -0.67
SCARB1-204ENST00000535005 TLE1Q04724 770 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms