RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 FBXO45P0C2W1 286 aa8.16□□□□□ -1.1
SF3B2-216ENST00000534765 FOLR1P15328 257 aa8.16□□□□□ -1.1
SF3B2-216ENST00000534765 MDKP21741 143 aaPredicted RBP8.16□□□□□ -1.1
SF3B2-216ENST00000534765 EDNRAP25101 427 aa8.16□□□□□ -1.1
SF3B2-216ENST00000534765 CXCL12P48061 93 aa8.16□□□□□ -1.1
SF3B2-216ENST00000534765 NUTF2P61970 127 aaKnown RBP8.16□□□□□ -1.1
SF3B2-216ENST00000534765 OR5I1Q13606 314 aa8.16□□□□□ -1.1
SF3B2-216ENST00000534765 TMEM35AQ53FP2 167 aa8.16□□□□□ -1.1
SF3B2-216ENST00000534765 TEX30Q5JUR7 227 aa8.16□□□□□ -1.1
SF3B2-216ENST00000534765 LPCAT3Q6P1A2 487 aa8.16□□□□□ -1.1
SF3B2-216ENST00000534765 UQCC3Q6UW78 93 aa8.16□□□□□ -1.1
SF3B2-216ENST00000534765 SLC43A2Q8N370 569 aa8.16□□□□□ -1.1
SF3B2-216ENST00000534765 TMEM105Q8N8V8 129 aa8.16□□□□□ -1.1
SF3B2-216ENST00000534765 OR51L1Q8NGJ5 315 aa8.16□□□□□ -1.1
SF3B2-216ENST00000534765 OR5W2Q8NH69 310 aa8.16□□□□□ -1.1
SF3B2-216ENST00000534765 SYT4Q9H2B2 425 aa8.16□□□□□ -1.1
SF3B2-216ENST00000534765 KCNJ16Q9NPI9 418 aa8.16□□□□□ -1.1
SF3B2-216ENST00000534765 EXOSC3Q9NQT5 275 aaKnown RBP8.16□□□□□ -1.1
SF3B2-216ENST00000534765 A4GNTQ9UNA3 340 aa8.16□□□□□ -1.1
SF3B2-216ENST00000534765 RPP14O95059 124 aaKnown RBP8.15□□□□□ -1.1
SF3B2-216ENST00000534765 GPR4P46093 362 aa8.15□□□□□ -1.1
SF3B2-216ENST00000534765 CLDN6P56747 220 aa8.15□□□□□ -1.1
SF3B2-216ENST00000534765 TRA2AQ13595 282 aaKnown RBP eCLIP8.15□□□□□ -1.12e-9■□□□□ 9.4
SF3B2-216ENST00000534765 NNATQ16517 81 aa8.15□□□□□ -1.1
SF3B2-216ENST00000534765 CPEB3Q8NE35 698 aaKnown RBP8.15□□□□□ -1.1
SF3B2-216ENST00000534765 BBS1Q8NFJ9 593 aa8.15□□□□□ -1.1
SF3B2-216ENST00000534765 CADM4Q8NFZ8 388 aa8.15□□□□□ -1.1
SF3B2-216ENST00000534765 NDC1Q9BTX1 674 aa8.15□□□□□ -1.1
SF3B2-216ENST00000534765 DUSP15Q9H1R2 295 aaPredicted RBP8.15□□□□□ -1.1
SF3B2-216ENST00000534765 OR51B6Q9H340 312 aa8.15□□□□□ -1.1
SF3B2-216ENST00000534765 A4GALTQ9NPC4 353 aa8.15□□□□□ -1.1
SF3B2-216ENST00000534765 TAS2R5Q9NYW4 299 aa8.15□□□□□ -1.1
SF3B2-216ENST00000534765 DOK5Q9P104 306 aa8.15□□□□□ -1.1
SF3B2-216ENST00000534765 FBXO7Q9Y3I1 522 aa8.15□□□□□ -1.1
SF3B2-216ENST00000534765 PCSK5Q92824 1860 aa8.15□□□□□ -1.1
SF3B2-216ENST00000534765 KIR2DS5A0A0G2JLQ3 304 aa8.15□□□□□ -1.1
SF3B2-216ENST00000534765 A0A0G2JNG1 304 aa8.15□□□□□ -1.1
SF3B2-216ENST00000534765 KIR2DS3K7RE56 304 aa8.15□□□□□ -1.1
SF3B2-216ENST00000534765 ZNF208O43345 1280 aa8.15□□□□□ -1.1
SF3B2-216ENST00000534765 LIMS3P0CW19 117 aa8.15□□□□□ -1.1
SF3B2-216ENST00000534765 LIMS4P0CW20 117 aa8.15□□□□□ -1.1
SF3B2-216ENST00000534765 ID4P47928 161 aa8.15□□□□□ -1.1
SF3B2-216ENST00000534765 RIPPLY1Q0D2K3 151 aa8.15□□□□□ -1.1
SF3B2-216ENST00000534765 RAB40BQ12829 278 aa8.15□□□□□ -1.1
SF3B2-216ENST00000534765 KIR2DS5Q14953 304 aa8.15□□□□□ -1.1
SF3B2-216ENST00000534765 MLC1Q15049 377 aa8.15□□□□□ -1.1
SF3B2-216ENST00000534765 EBPQ15125 230 aaKnown RBP8.15□□□□□ -1.1
SF3B2-216ENST00000534765 PRICKLE4Q2TBC4 344 aa8.15□□□□□ -1.1
SF3B2-216ENST00000534765 PRTGQ2VWP7 1150 aa8.15□□□□□ -1.1
SF3B2-216ENST00000534765 GFI1BQ5VTD9 330 aa8.15□□□□□ -1.1
SF3B2-216ENST00000534765 NCR3LG1Q68D85 454 aa8.15□□□□□ -1.1
SF3B2-216ENST00000534765 WDR88Q6ZMY6 472 aa8.15□□□□□ -1.1
SF3B2-216ENST00000534765 ZNF836Q6ZNA1 936 aa8.15□□□□□ -1.1
SF3B2-216ENST00000534765 CMTM4Q8IZR5 234 aa8.15□□□□□ -1.1
SF3B2-216ENST00000534765 ACBD7Q8N6N7 88 aa8.15□□□□□ -1.1
SF3B2-216ENST00000534765 NUP43Q8NFH3 380 aa8.15□□□□□ -1.1
SF3B2-216ENST00000534765 SYNPRQ8TBG9 265 aa8.15□□□□□ -1.1
SF3B2-216ENST00000534765 PNPLA2Q96AD5 504 aa8.15□□□□□ -1.1
SF3B2-216ENST00000534765 FAM46AQ96IP4 442 aaKnown RBP8.15□□□□□ -1.1
SF3B2-216ENST00000534765 NRIP2Q9BQI9 281 aa8.15□□□□□ -1.1
SF3B2-216ENST00000534765 RTN4RQ9BZR6 473 aa8.15□□□□□ -1.1
SF3B2-216ENST00000534765 SEMA6CQ9H3T2 930 aa8.15□□□□□ -1.1
SF3B2-216ENST00000534765 LRIT1Q9P2V4 623 aa8.15□□□□□ -1.1
SF3B2-216ENST00000534765 AMY2AP04746 511 aa8.15□□□□□ -1.11
SF3B2-216ENST00000534765 ATP1B1P05026 303 aa8.15□□□□□ -1.11
SF3B2-216ENST00000534765 GYPBP06028 91 aa8.15□□□□□ -1.11
SF3B2-216ENST00000534765 GNSP15586 552 aa8.15□□□□□ -1.11
SF3B2-216ENST00000534765 OR1D4P47884 311 aa8.15□□□□□ -1.11
SF3B2-216ENST00000534765 GSK3AP49840 483 aa8.15□□□□□ -1.11
SF3B2-216ENST00000534765 HNRNPKP61978 463 aaKnown RBP eCLIP8.15□□□□□ -1.11
SF3B2-216ENST00000534765 MEF2DQ14814 521 aa8.15□□□□□ -1.11
SF3B2-216ENST00000534765 TP53I3Q53FA7 332 aa8.15□□□□□ -1.11
SF3B2-216ENST00000534765 NSUN5P2Q63ZY6 315 aa8.15□□□□□ -1.11
SF3B2-216ENST00000534765 C19orf48Q6RUI8 117 aa8.15□□□□□ -1.11
SF3B2-216ENST00000534765 ZNF627Q7L945 461 aa8.15□□□□□ -1.11
SF3B2-216ENST00000534765 TPRA1Q86W33 373 aa8.15□□□□□ -1.11
SF3B2-216ENST00000534765 MRPL41Q8IXM3 137 aaKnown RBP8.15□□□□□ -1.11
SF3B2-216ENST00000534765 NEK7Q8TDX7 302 aa8.15□□□□□ -1.11
SF3B2-216ENST00000534765 FOXRED1Q96CU9 486 aaPredicted RBP8.15□□□□□ -1.11
SF3B2-216ENST00000534765 DDA1Q9BW61 102 aa8.15□□□□□ -1.11
SF3B2-216ENST00000534765 RAB33BQ9H082 229 aa8.15□□□□□ -1.11
SF3B2-216ENST00000534765 MOKQ9UQ07 419 aa8.15□□□□□ -1.11
SF3B2-216ENST00000534765 ACOD1A6NK06 481 aa8.14□□□□□ -1.11
SF3B2-216ENST00000534765 LMO7DNF2Z398 122 aa8.14□□□□□ -1.11
SF3B2-216ENST00000534765 BCAT2O15382 392 aaPredicted RBP8.14□□□□□ -1.11
SF3B2-216ENST00000534765 BCL2L11O43521 198 aa8.14□□□□□ -1.11
SF3B2-216ENST00000534765 PGAM2P15259 253 aa8.14□□□□□ -1.11
SF3B2-216ENST00000534765 AKR1C4P17516 323 aa8.14□□□□□ -1.11
SF3B2-216ENST00000534765 ATF1P18846 271 aa8.14□□□□□ -1.11
SF3B2-216ENST00000534765 CD1CP29017 333 aa8.14□□□□□ -1.11
SF3B2-216ENST00000534765 ADAM8P78325 824 aa8.14□□□□□ -1.11
SF3B2-216ENST00000534765 PJVKQ0ZLH3 352 aa8.14□□□□□ -1.11
SF3B2-216ENST00000534765 EIF2B1Q14232 305 aaKnown RBP8.14□□□□□ -1.11
SF3B2-216ENST00000534765 GGNBP1Q5YKI7 109 aa8.14□□□□□ -1.11
SF3B2-216ENST00000534765 RTL6Q6ICC9 239 aa8.14□□□□□ -1.11
SF3B2-216ENST00000534765 LCN10Q6JVE6 187 aa8.14□□□□□ -1.11
SF3B2-216ENST00000534765 PODNL1Q6PEZ8 512 aa8.14□□□□□ -1.11
SF3B2-216ENST00000534765 FRRS1Q6ZNA5 592 aa8.14□□□□□ -1.11
SF3B2-216ENST00000534765 CYB561A3Q8NBI2 242 aa8.14□□□□□ -1.11
SF3B2-216ENST00000534765 OR51Q1Q8NH59 317 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms