RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 ZDHHC21Q8IVQ6 265 aa13.08□□□□□ -0.32
CPSF1-211ENST00000533492 OR4M2Q8NGB6 313 aa13.08□□□□□ -0.32
CPSF1-211ENST00000533492 ST7LQ8TDW4 575 aa13.08□□□□□ -0.32
CPSF1-211ENST00000533492 NMNAT3Q96T66 252 aa13.08□□□□□ -0.32
CPSF1-211ENST00000533492 CDADC1Q9BWV3 514 aa13.08□□□□□ -0.32
CPSF1-211ENST00000533492 ATPIF1Q9UII2 106 aa13.08□□□□□ -0.32
CPSF1-211ENST00000533492 PCDHB10Q9UN67 800 aa13.08□□□□□ -0.32
CPSF1-211ENST00000533492 NPTNQ9Y639 398 aa13.08□□□□□ -0.32
CPSF1-211ENST00000533492 WNK2Q9Y3S1 2297 aa13.08□□□□□ -0.32
CPSF1-211ENST00000533492 J3QW42 95 aa13.07□□□□□ -0.32
CPSF1-211ENST00000533492 IDH3BO43837 385 aa13.07□□□□□ -0.32
CPSF1-211ENST00000533492 KRT36O76013 467 aa13.07□□□□□ -0.32
CPSF1-211ENST00000533492 HLA-DQA2P01906 255 aa13.07□□□□□ -0.32
CPSF1-211ENST00000533492 SBK2P0C263 348 aa13.07□□□□□ -0.32
CPSF1-211ENST00000533492 RAC2P15153 192 aa13.07□□□□□ -0.32
CPSF1-211ENST00000533492 HIST1H1CP16403 213 aaKnown RBP13.07□□□□□ -0.32
CPSF1-211ENST00000533492 SLC36A3Q495N2 470 aa13.07□□□□□ -0.32
CPSF1-211ENST00000533492 SPRNQ5BIV9 151 aa13.07□□□□□ -0.32
CPSF1-211ENST00000533492 DCAF12L2Q5VW00 463 aa13.07□□□□□ -0.32
CPSF1-211ENST00000533492 OR5AS1Q8N127 324 aa13.07□□□□□ -0.32
CPSF1-211ENST00000533492 OR6V1Q8N148 313 aa13.07□□□□□ -0.32
CPSF1-211ENST00000533492 ATG16L2Q8NAA4 619 aa13.07□□□□□ -0.32
CPSF1-211ENST00000533492 OR2AJ1Q8NGZ0 328 aa13.07□□□□□ -0.32
CPSF1-211ENST00000533492 APOBEC3DQ96AK3 386 aaPredicted RBP13.07□□□□□ -0.32
CPSF1-211ENST00000533492 COQ7Q99807 217 aa13.07□□□□□ -0.32
CPSF1-211ENST00000533492 HDHD2Q9H0R4 259 aa13.07□□□□□ -0.32
CPSF1-211ENST00000533492 RPRD1BQ9NQG5 326 aaKnown RBP13.07□□□□□ -0.32
CPSF1-211ENST00000533492 G6PC2Q9NQR9 355 aa13.07□□□□□ -0.32
CPSF1-211ENST00000533492 TMEM106BQ9NUM4 274 aa13.07□□□□□ -0.32
CPSF1-211ENST00000533492 PTTG3PQ9NZH4 202 aa13.07□□□□□ -0.32
CPSF1-211ENST00000533492 IL19Q9UHD0 177 aa13.07□□□□□ -0.32
CPSF1-211ENST00000533492 LHFPL6Q9Y693 200 aa13.07□□□□□ -0.32
CPSF1-211ENST00000533492 DYSFO75923 2080 aa13.07□□□□□ -0.32
CPSF1-211ENST00000533492 IGLV1-36A0A0B4J1U3 117 aa13.06□□□□□ -0.32
CPSF1-211ENST00000533492 GSSP48637 474 aa13.06□□□□□ -0.32
CPSF1-211ENST00000533492 TSPAN31Q12999 210 aa13.06□□□□□ -0.32
CPSF1-211ENST00000533492 SLC27A4Q6P1M0 643 aa13.06□□□□□ -0.32
CPSF1-211ENST00000533492 CORO6Q6QEF8 472 aa13.06□□□□□ -0.32
CPSF1-211ENST00000533492 CYP2R1Q6VVX0 501 aa13.06□□□□□ -0.32
CPSF1-211ENST00000533492 Q6ZR03 302 aa13.06□□□□□ -0.32
CPSF1-211ENST00000533492 OR52L1Q8NGH7 329 aa13.06□□□□□ -0.32
CPSF1-211ENST00000533492 OR52E2Q8NGJ4 325 aa13.06□□□□□ -0.32
CPSF1-211ENST00000533492 ITLN1Q8WWA0 313 aa13.06□□□□□ -0.32
CPSF1-211ENST00000533492 PITX2Q99697 317 aa13.06□□□□□ -0.32
CPSF1-211ENST00000533492 PPP1R3CQ9UQK1 317 aa13.06□□□□□ -0.32
CPSF1-211ENST00000533492 LOC105371242A0A075B767 164 aa13.05□□□□□ -0.32
CPSF1-211ENST00000533492 A0A0A6YYJ9 748 aa13.05□□□□□ -0.32
CPSF1-211ENST00000533492 B2RBV5 119 aa13.05□□□□□ -0.32
CPSF1-211ENST00000533492 J3QLI3 93 aa13.05□□□□□ -0.32
CPSF1-211ENST00000533492 TNFRSF11BO00300 401 aa13.05□□□□□ -0.32
CPSF1-211ENST00000533492 HIST1H3AP68431 136 aa13.05□□□□□ -0.32
CPSF1-211ENST00000533492 COX10Q12887 443 aa13.05□□□□□ -0.32
CPSF1-211ENST00000533492 HLXQ14774 488 aaPredicted RBP13.05□□□□□ -0.32
CPSF1-211ENST00000533492 CLEC12AQ5QGZ9 265 aa13.05□□□□□ -0.32
CPSF1-211ENST00000533492 SLC35F1Q5T1Q4 408 aa13.05□□□□□ -0.32
CPSF1-211ENST00000533492 HIST2H3PS2Q5TEC6 136 aa13.05□□□□□ -0.32
CPSF1-211ENST00000533492 OR2T2Q6IF00 324 aa13.05□□□□□ -0.32
CPSF1-211ENST00000533492 PGBD2Q6P3X8 592 aa13.05□□□□□ -0.32
CPSF1-211ENST00000533492 FBXW12Q6X9E4 464 aa13.05□□□□□ -0.32
CPSF1-211ENST00000533492 ZNF620Q6ZNG0 422 aa13.05□□□□□ -0.32
CPSF1-211ENST00000533492 HIST2H3AQ71DI3 136 aa13.05□□□□□ -0.32
CPSF1-211ENST00000533492 KLHL36Q8N4N3 616 aa13.05□□□□□ -0.32
CPSF1-211ENST00000533492 LINC00471Q8N535 108 aa13.05□□□□□ -0.32
CPSF1-211ENST00000533492 SDR9C7Q8NEX9 313 aa13.05□□□□□ -0.32
CPSF1-211ENST00000533492 SLC26A10Q8NG04 563 aa13.05□□□□□ -0.32
CPSF1-211ENST00000533492 OR13G1Q8NGZ3 307 aa13.05□□□□□ -0.32
CPSF1-211ENST00000533492 ZNF418Q8TF45 676 aaPredicted RBP13.05□□□□□ -0.32
CPSF1-211ENST00000533492 ZNF582Q96NG8 517 aaPredicted RBP13.05□□□□□ -0.32
CPSF1-211ENST00000533492 OR2V2Q96R30 315 aa13.05□□□□□ -0.32
CPSF1-211ENST00000533492 DCAF16Q9NXF7 216 aa13.05□□□□□ -0.32
CPSF1-211ENST00000533492 TANC2Q9HCD6 1990 aa13.04□□□□□ -0.32
CPSF1-211ENST00000533492 OR6C68A6NDL8 312 aa13.04□□□□□ -0.32
CPSF1-211ENST00000533492 F5H5K5 113 aa13.04□□□□□ -0.32
CPSF1-211ENST00000533492 FOXH1O75593 365 aa13.04□□□□□ -0.32
CPSF1-211ENST00000533492 AVPP01185 164 aa13.04□□□□□ -0.32
CPSF1-211ENST00000533492 ZNF823P16415 610 aa13.04□□□□□ -0.32
CPSF1-211ENST00000533492 GATA3P23771 443 aa13.04□□□□□ -0.32
CPSF1-211ENST00000533492 ERFP50548 548 aa13.04□□□□□ -0.32
CPSF1-211ENST00000533492 HMGA2P52926 109 aa13.04□□□□□ -0.32
CPSF1-211ENST00000533492 LCN2P80188 198 aa13.04□□□□□ -0.32
CPSF1-211ENST00000533492 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.04□□□□□ -0.32
CPSF1-211ENST00000533492 ECH1Q13011 328 aa13.04□□□□□ -0.32
CPSF1-211ENST00000533492 RPL13AP3Q6NVV1 102 aa13.04□□□□□ -0.32
CPSF1-211ENST00000533492 ZBTB46Q86UZ6 589 aa13.04□□□□□ -0.32
CPSF1-211ENST00000533492 LINC00346Q8IVM7 164 aa13.04□□□□□ -0.32
CPSF1-211ENST00000533492 SPICQ8N5J4 248 aa13.04□□□□□ -0.32
CPSF1-211ENST00000533492 ZNF283Q8N7M2 679 aa13.04□□□□□ -0.32
CPSF1-211ENST00000533492 OR8G5Q8NG78 346 aa13.04□□□□□ -0.32
CPSF1-211ENST00000533492 NANPQ8TBE9 248 aa13.04□□□□□ -0.32
CPSF1-211ENST00000533492 NSL1Q96IY1 281 aa13.04□□□□□ -0.32
CPSF1-211ENST00000533492 HCAR1Q9BXC0 346 aa13.04□□□□□ -0.32
CPSF1-211ENST00000533492 TMPRSS13Q9BYE2 586 aa13.04□□□□□ -0.32
CPSF1-211ENST00000533492 FN3KQ9H479 309 aa13.04□□□□□ -0.32
CPSF1-211ENST00000533492 EGLN3Q9H6Z9 239 aa13.04□□□□□ -0.32
CPSF1-211ENST00000533492 C7orf69Q9H7B7 122 aa13.04□□□□□ -0.32
CPSF1-211ENST00000533492 ACTR3BQ9P1U1 418 aa13.04□□□□□ -0.32
CPSF1-211ENST00000533492 LYVE1Q9Y5Y7 322 aa13.04□□□□□ -0.32
CPSF1-211ENST00000533492 FBN3Q75N90 2809 aa13.04□□□□□ -0.32
CPSF1-211ENST00000533492 ARHGAP32A7KAX9 2087 aa13.03□□□□□ -0.32
CPSF1-211ENST00000533492 CCNB2O95067 398 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms