RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 RBPJQ06330 500 aa16.27■□□□□ 0.2
SMPD1-208ENST00000533123 ODF4Q2M2E3 257 aa16.27■□□□□ 0.2
SMPD1-208ENST00000533123 OR7E24Q6IFN5 339 aa16.27■□□□□ 0.2
SMPD1-208ENST00000533123 DCXRQ7Z4W1 244 aa16.27■□□□□ 0.2
SMPD1-208ENST00000533123 CCDC190Q86UF4 302 aa16.27■□□□□ 0.2
SMPD1-208ENST00000533123 LYSMD2Q8IV50 215 aa16.27■□□□□ 0.2
SMPD1-208ENST00000533123 PRSS35Q8N3Z0 413 aa16.27■□□□□ 0.2
SMPD1-208ENST00000533123 OR52N5Q8NH56 324 aa16.27■□□□□ 0.2
SMPD1-208ENST00000533123 ASB17Q8WXJ9 295 aa16.27■□□□□ 0.2
SMPD1-208ENST00000533123 ORAI1Q96D31 301 aa16.27■□□□□ 0.2
SMPD1-208ENST00000533123 TP63Q9H3D4 680 aaPredicted RBP16.27■□□□□ 0.2
SMPD1-208ENST00000533123 GP6Q9HCN6 339 aa16.27■□□□□ 0.2
SMPD1-208ENST00000533123 ABCB9Q9NP78 766 aa16.27■□□□□ 0.2
SMPD1-208ENST00000533123 GLRX2Q9NS18 164 aa16.27■□□□□ 0.2
SMPD1-208ENST00000533123 ZNF281Q9Y2X9 895 aa16.27■□□□□ 0.2
SMPD1-208ENST00000533123 ARHGAP21Q5T5U3 1957 aa16.27■□□□□ 0.2
SMPD1-208ENST00000533123 ISPDA4D126 451 aa16.27■□□□□ 0.19
SMPD1-208ENST00000533123 MBD3L4A6NDZ8 208 aaPredicted RBP16.27■□□□□ 0.19
SMPD1-208ENST00000533123 MBD3L3A6NE82 208 aaPredicted RBP16.27■□□□□ 0.19
SMPD1-208ENST00000533123 MBD3L5A6NJ08 208 aaPredicted RBP16.27■□□□□ 0.19
SMPD1-208ENST00000533123 GPRIN2O60269 458 aa16.27■□□□□ 0.19
SMPD1-208ENST00000533123 SS18L1O75177 396 aaPredicted RBP16.27■□□□□ 0.19
SMPD1-208ENST00000533123 FOXF2Q12947 444 aa16.27■□□□□ 0.19
SMPD1-208ENST00000533123 TSPO2Q5TGU0 170 aa16.27■□□□□ 0.19
SMPD1-208ENST00000533123 SYT9Q86SS6 491 aa16.27■□□□□ 0.19
SMPD1-208ENST00000533123 ZNF679Q8IYX0 411 aa16.27■□□□□ 0.19
SMPD1-208ENST00000533123 OR2G2Q8NGZ5 317 aa16.27■□□□□ 0.19
SMPD1-208ENST00000533123 MBD3L2Q8NHZ7 208 aaPredicted RBP16.27■□□□□ 0.19
SMPD1-208ENST00000533123 CEP19Q96LK0 163 aa16.27■□□□□ 0.19
SMPD1-208ENST00000533123 ALKBH3Q96Q83 286 aaPredicted RBP16.27■□□□□ 0.19
SMPD1-208ENST00000533123 MIXL1Q9H2W2 232 aa16.27■□□□□ 0.19
SMPD1-208ENST00000533123 CMAHPQ9Y471 501 aa16.27■□□□□ 0.19
SMPD1-208ENST00000533123 SERPINA3P01011 423 aa16.26■□□□□ 0.19
SMPD1-208ENST00000533123 MYL9P24844 172 aa16.26■□□□□ 0.19
SMPD1-208ENST00000533123 LAP3P28838 519 aa16.26■□□□□ 0.19
SMPD1-208ENST00000533123 PER3P56645 1201 aa16.26■□□□□ 0.19
SMPD1-208ENST00000533123 ROM1Q03395 351 aa16.26■□□□□ 0.19
SMPD1-208ENST00000533123 PCK2Q16822 640 aa16.26■□□□□ 0.19
SMPD1-208ENST00000533123 OR2A2Q6IF42 318 aa16.26■□□□□ 0.19
SMPD1-208ENST00000533123 FAM214BQ7L5A3 538 aa16.26■□□□□ 0.19
SMPD1-208ENST00000533123 KRT77Q7Z794 578 aa16.26■□□□□ 0.19
SMPD1-208ENST00000533123 RDH10Q8IZV5 341 aa16.26■□□□□ 0.19
SMPD1-208ENST00000533123 CNEP1R1Q8N9A8 125 aa16.26■□□□□ 0.19
SMPD1-208ENST00000533123 ST7LQ8TDW4 575 aa16.26■□□□□ 0.19
SMPD1-208ENST00000533123 APH1AQ96BI3 265 aa16.26■□□□□ 0.19
SMPD1-208ENST00000533123 ZNF837Q96EG3 531 aaPredicted RBP16.26■□□□□ 0.19
SMPD1-208ENST00000533123 ATF6BQ99941 703 aa16.26■□□□□ 0.19
SMPD1-208ENST00000533123 ULBP2Q9BZM5 246 aa16.26■□□□□ 0.19
SMPD1-208ENST00000533123 SEC61A2Q9H9S3 476 aa16.26■□□□□ 0.19
SMPD1-208ENST00000533123 EMC7Q9NPA0 242 aa16.26■□□□□ 0.19
SMPD1-208ENST00000533123 ABCB10Q9NRK6 738 aa16.26■□□□□ 0.19
SMPD1-208ENST00000533123 LRP12Q9Y561 859 aa16.26■□□□□ 0.19
SMPD1-208ENST00000533123 ACOD1A6NK06 481 aa16.26■□□□□ 0.19
SMPD1-208ENST00000533123 H3BSH0 61 aa16.26■□□□□ 0.19
SMPD1-208ENST00000533123 ATXN7O15265 892 aaPredicted RBP16.26■□□□□ 0.19
SMPD1-208ENST00000533123 MFGE8Q08431 387 aaPredicted RBP16.26■□□□□ 0.19
SMPD1-208ENST00000533123 GUSBP1Q15486 140 aa16.26■□□□□ 0.19
SMPD1-208ENST00000533123 SPANXN2Q5MJ10 180 aa16.26■□□□□ 0.19
SMPD1-208ENST00000533123 SLC25A47Q6Q0C1 308 aa16.26■□□□□ 0.19
SMPD1-208ENST00000533123 ZNF100Q8IYN0 542 aa16.26■□□□□ 0.19
SMPD1-208ENST00000533123 SLC7A5P1Q8MH63 180 aa16.26■□□□□ 0.19
SMPD1-208ENST00000533123 GPR137CQ8N3F9 429 aa16.26■□□□□ 0.19
SMPD1-208ENST00000533123 ZNF454Q8N9F8 522 aa16.26■□□□□ 0.19
SMPD1-208ENST00000533123 ST6GALNAC3Q8NDV1 305 aa16.26■□□□□ 0.19
SMPD1-208ENST00000533123 OR5AK2Q8NH90 309 aa16.26■□□□□ 0.19
SMPD1-208ENST00000533123 SLCO5A1Q9H2Y9 848 aa16.26■□□□□ 0.19
SMPD1-208ENST00000533123 CRLF2Q9HC73 371 aa16.26■□□□□ 0.19
SMPD1-208ENST00000533123 FBXL3Q9UKT7 428 aa16.26■□□□□ 0.19
SMPD1-208ENST00000533123 PCNX1Q96RV3 2341 aa16.26■□□□□ 0.19
SMPD1-208ENST00000533123 OR4C45A6NMZ5 311 aa16.25■□□□□ 0.19
SMPD1-208ENST00000533123 PNPP00491 289 aa16.25■□□□□ 0.19
SMPD1-208ENST00000533123 HRGP04196 525 aa16.25■□□□□ 0.19
SMPD1-208ENST00000533123 KIR3DL2P43630 455 aa16.25■□□□□ 0.19
SMPD1-208ENST00000533123 YIF1BQ5BJH7 314 aa16.25■□□□□ 0.19
SMPD1-208ENST00000533123 WDR38Q5JTN6 314 aa16.25■□□□□ 0.19
SMPD1-208ENST00000533123 KCTD18Q6PI47 426 aaPredicted RBP16.25■□□□□ 0.19
SMPD1-208ENST00000533123 LINGO2Q7L985 606 aa16.25■□□□□ 0.19
SMPD1-208ENST00000533123 AP3S1Q92572 193 aa16.25■□□□□ 0.19
SMPD1-208ENST00000533123 SLC30A2Q9BRI3 323 aa16.25■□□□□ 0.19
SMPD1-208ENST00000533123 RBM24Q9BX46 236 aaKnown RBP16.25■□□□□ 0.19
SMPD1-208ENST00000533123 NOX4Q9NPH5 578 aa16.25■□□□□ 0.19
SMPD1-208ENST00000533123 SLC7A10Q9NS82 523 aa16.25■□□□□ 0.19
SMPD1-208ENST00000533123 COMMD3Q9UBI1 195 aa16.25■□□□□ 0.19
SMPD1-208ENST00000533123 PIN1P1O15428 100 aa16.25■□□□□ 0.19
SMPD1-208ENST00000533123 KRT33AO76009 404 aa16.25■□□□□ 0.19
SMPD1-208ENST00000533123 HOXD4P09016 255 aaPredicted RBP16.25■□□□□ 0.19
SMPD1-208ENST00000533123 UCHL1P09936 223 aa16.25■□□□□ 0.19
SMPD1-208ENST00000533123 ETV6P41212 452 aa16.25■□□□□ 0.19
SMPD1-208ENST00000533123 KIR2DL2P43627 348 aaPredicted RBP16.25■□□□□ 0.19
SMPD1-208ENST00000533123 MRPL28Q13084 256 aaKnown RBP16.25■□□□□ 0.19
SMPD1-208ENST00000533123 TEX30Q5JUR7 227 aa16.25■□□□□ 0.19
SMPD1-208ENST00000533123 STEAP3Q658P3 488 aa16.25■□□□□ 0.19
SMPD1-208ENST00000533123 NAXEQ8NCW5 288 aa16.25■□□□□ 0.19
SMPD1-208ENST00000533123 OR10H5Q8NGA6 315 aa16.25■□□□□ 0.19
SMPD1-208ENST00000533123 OR10AC1Q8NH08 325 aa16.25■□□□□ 0.19
SMPD1-208ENST00000533123 PPP1R14AQ96A00 147 aa16.25■□□□□ 0.19
SMPD1-208ENST00000533123 C4orf45Q96LM5 186 aa16.25■□□□□ 0.19
SMPD1-208ENST00000533123 B3GAT2Q9NPZ5 323 aa16.25■□□□□ 0.19
SMPD1-208ENST00000533123 GTF2A1LQ9UNN4 478 aa16.25■□□□□ 0.19
SMPD1-208ENST00000533123 SLC22A13Q9Y226 551 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms