RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 PAX2Q02962 417 aa10.43□□□□□ -0.74
CAPN1-223ENST00000533079 HIST3H3Q16695 136 aa10.43□□□□□ -0.74
CAPN1-223ENST00000533079 C2orf68Q2NKX9 166 aa10.43□□□□□ -0.74
CAPN1-223ENST00000533079 PABPC1L2AQ5JQF8 200 aa10.43□□□□□ -0.74
CAPN1-223ENST00000533079 TMEM255AQ5JRV8 349 aa10.43□□□□□ -0.74
CAPN1-223ENST00000533079 SPATA46Q5T0L3 261 aa10.43□□□□□ -0.74
CAPN1-223ENST00000533079 THEM4Q5T1C6 240 aa10.43□□□□□ -0.74
CAPN1-223ENST00000533079 REC114Q7Z4M0 266 aa10.43□□□□□ -0.74
CAPN1-223ENST00000533079 RANBP3LQ86VV4 465 aaPredicted RBP10.43□□□□□ -0.74
CAPN1-223ENST00000533079 ARMC8Q8IUR7 673 aa10.43□□□□□ -0.74
CAPN1-223ENST00000533079 CBR4Q8N4T8 237 aa10.43□□□□□ -0.74
CAPN1-223ENST00000533079 FAM86B1Q8N7N1 296 aa10.43□□□□□ -0.74
CAPN1-223ENST00000533079 NOXO1Q8NFA2 376 aa10.43□□□□□ -0.74
CAPN1-223ENST00000533079 OR5K1Q8NHB7 308 aa10.43□□□□□ -0.74
CAPN1-223ENST00000533079 SLC25A40Q8TBP6 338 aa10.43□□□□□ -0.74
CAPN1-223ENST00000533079 FAM71F1Q96KD3 344 aaPredicted RBP10.43□□□□□ -0.74
CAPN1-223ENST00000533079 POM121L2Q96KW2 1035 aa10.43□□□□□ -0.74
CAPN1-223ENST00000533079 C7orf34Q96L11 122 aa10.43□□□□□ -0.74
CAPN1-223ENST00000533079 ZNF347Q96SE7 839 aa10.43□□□□□ -0.74
CAPN1-223ENST00000533079 ARHGDIGQ99819 225 aa10.43□□□□□ -0.74
CAPN1-223ENST00000533079 CIB1Q99828 191 aa10.43□□□□□ -0.74
CAPN1-223ENST00000533079 OR2J1Q9GZK6 312 aa10.43□□□□□ -0.74
CAPN1-223ENST00000533079 CCNB1IP1Q9NPC3 277 aa10.43□□□□□ -0.74
CAPN1-223ENST00000533079 OAZ3Q9UMX2 235 aa10.43□□□□□ -0.74
CAPN1-223ENST00000533079 RNF114Q9Y508 228 aa10.43□□□□□ -0.74
CAPN1-223ENST00000533079 MDFIC2A0A1B0GVS7 189 aa10.42□□□□□ -0.74
CAPN1-223ENST00000533079 C5orf49A4QMS7 147 aa10.42□□□□□ -0.74
CAPN1-223ENST00000533079 MAGEA13PA6NCF6 341 aa10.42□□□□□ -0.74
CAPN1-223ENST00000533079 CEACAM18A8MTB9 384 aa10.42□□□□□ -0.74
CAPN1-223ENST00000533079 SOCS2O14508 198 aa10.42□□□□□ -0.74
CAPN1-223ENST00000533079 SURF4O15260 269 aa10.42□□□□□ -0.74
CAPN1-223ENST00000533079 RNF13O43567 381 aa10.42□□□□□ -0.74
CAPN1-223ENST00000533079 TPST1O60507 370 aa10.42□□□□□ -0.74
CAPN1-223ENST00000533079 ZNF682O95780 498 aa10.42□□□□□ -0.74
CAPN1-223ENST00000533079 CST1P01037 141 aa10.42□□□□□ -0.74
CAPN1-223ENST00000533079 FABP3P05413 133 aa10.42□□□□□ -0.74
CAPN1-223ENST00000533079 TUBG1P23258 451 aa10.42□□□□□ -0.74
CAPN1-223ENST00000533079 GDI2P50395 445 aaKnown RBP10.42□□□□□ -0.74
CAPN1-223ENST00000533079 ZNF133P52736 654 aaPredicted RBP10.42□□□□□ -0.74
CAPN1-223ENST00000533079 RGS8P57771 180 aaPredicted RBP10.42□□□□□ -0.74
CAPN1-223ENST00000533079 CLRN1P58418 232 aa10.42□□□□□ -0.74
CAPN1-223ENST00000533079 PPP1CBP62140 327 aa10.42□□□□□ -0.74
CAPN1-223ENST00000533079 CDK5R2Q13319 367 aa10.42□□□□□ -0.74
CAPN1-223ENST00000533079 MELKQ14680 651 aa10.42□□□□□ -0.74
CAPN1-223ENST00000533079 ZMYND11Q15326 602 aa10.42□□□□□ -0.74
CAPN1-223ENST00000533079 OR1Q1Q15612 314 aa10.42□□□□□ -0.74
CAPN1-223ENST00000533079 DEFB112Q30KQ8 113 aa10.42□□□□□ -0.74
CAPN1-223ENST00000533079 LRRC23Q53EV4 343 aaPredicted RBP10.42□□□□□ -0.74
CAPN1-223ENST00000533079 C10orf128Q5T292 105 aa10.42□□□□□ -0.74
CAPN1-223ENST00000533079 GPR157Q5UAW9 335 aa10.42□□□□□ -0.74
CAPN1-223ENST00000533079 ZNF774Q6NX45 483 aa10.42□□□□□ -0.74
CAPN1-223ENST00000533079 Q6YL49 198 aa10.42□□□□□ -0.74
CAPN1-223ENST00000533079 ZDHHC13Q8IUH4 622 aa10.42□□□□□ -0.74
CAPN1-223ENST00000533079 ZDHHC21Q8IVQ6 265 aa10.42□□□□□ -0.74
CAPN1-223ENST00000533079 GALNT4Q8N4A0 578 aa10.42□□□□□ -0.74
CAPN1-223ENST00000533079 OR10S1Q8NGN2 331 aa10.42□□□□□ -0.74
CAPN1-223ENST00000533079 NFKBIDQ8NI38 313 aa10.42□□□□□ -0.74
CAPN1-223ENST00000533079 DYRK2Q92630 601 aa10.42□□□□□ -0.74
CAPN1-223ENST00000533079 TFAP2CQ92754 450 aa10.42□□□□□ -0.74
CAPN1-223ENST00000533079 MAL2Q969L2 176 aa10.42□□□□□ -0.74
CAPN1-223ENST00000533079 MCHR2Q969V1 340 aa10.42□□□□□ -0.74
CAPN1-223ENST00000533079 DACT3Q96B18 629 aaPredicted RBP10.42□□□□□ -0.74
CAPN1-223ENST00000533079 PLEKHA8Q96JA3 519 aa10.42□□□□□ -0.74
CAPN1-223ENST00000533079 SIGLEC11Q96RL6 698 aa10.42□□□□□ -0.74
CAPN1-223ENST00000533079 DCLRE1CQ96SD1 692 aaKnown RBP10.42□□□□□ -0.74
CAPN1-223ENST00000533079 CHIAQ9BZP6 476 aa10.42□□□□□ -0.74
CAPN1-223ENST00000533079 SIAEQ9HAT2 523 aa10.42□□□□□ -0.74
CAPN1-223ENST00000533079 SMURF2Q9HAU4 748 aa10.42□□□□□ -0.74
CAPN1-223ENST00000533079 ELOVL3Q9HB03 270 aa10.42□□□□□ -0.74
CAPN1-223ENST00000533079 BATF3Q9NR55 127 aa10.42□□□□□ -0.74
CAPN1-223ENST00000533079 TUBG2Q9NRH3 451 aa10.42□□□□□ -0.74
CAPN1-223ENST00000533079 IL19Q9UHD0 177 aa10.42□□□□□ -0.74
CAPN1-223ENST00000533079 BAG5Q9UL15 447 aa10.42□□□□□ -0.74
CAPN1-223ENST00000533079 WNK2Q9Y3S1 2297 aa10.41□□□□□ -0.74
CAPN1-223ENST00000533079 IGHV3OR16-10A0A075B7F0 116 aa10.41□□□□□ -0.74
CAPN1-223ENST00000533079 C5orf63A6NC05 138 aa10.41□□□□□ -0.74
CAPN1-223ENST00000533079 LRRN3E7EW58 273 aa10.41□□□□□ -0.74
CAPN1-223ENST00000533079 C3orf80F5H4A9 247 aa10.41□□□□□ -0.74
CAPN1-223ENST00000533079 G3V2T6 193 aa10.41□□□□□ -0.74
CAPN1-223ENST00000533079 H0YAE9 185 aa10.41□□□□□ -0.74
CAPN1-223ENST00000533079 DLGAP1O14490 977 aa10.41□□□□□ -0.74
CAPN1-223ENST00000533079 PIN1P1O15428 100 aa10.41□□□□□ -0.74
CAPN1-223ENST00000533079 CHP2O43745 196 aa10.41□□□□□ -0.74
CAPN1-223ENST00000533079 TIMM8AO60220 97 aaPredicted RBP10.41□□□□□ -0.74
CAPN1-223ENST00000533079 FMO6PO60774 539 aa10.41□□□□□ -0.74
CAPN1-223ENST00000533079 SERPINB7O75635 380 aa10.41□□□□□ -0.74
CAPN1-223ENST00000533079 FSTL3O95633 263 aa10.41□□□□□ -0.74
CAPN1-223ENST00000533079 NR2C1P13056 603 aa10.41□□□□□ -0.74
CAPN1-223ENST00000533079 RPS2P15880 293 aaKnown RBP10.41□□□□□ -0.74
CAPN1-223ENST00000533079 ALDH3A2P51648 485 aa10.41□□□□□ -0.74
CAPN1-223ENST00000533079 ARHGDIAP52565 204 aa10.41□□□□□ -0.74
CAPN1-223ENST00000533079 HMGA2P52926 109 aa10.41□□□□□ -0.74
CAPN1-223ENST00000533079 CDH12P55289 794 aa10.41□□□□□ -0.74
CAPN1-223ENST00000533079 GNB2P62879 340 aa10.41□□□□□ -0.74
CAPN1-223ENST00000533079 MRPS34P82930 218 aaKnown RBP10.41□□□□□ -0.74
CAPN1-223ENST00000533079 ZNF74Q16587 644 aa10.41□□□□□ -0.74
CAPN1-223ENST00000533079 IFI44LQ53G44 452 aa10.41□□□□□ -0.74
CAPN1-223ENST00000533079 OR2T5Q6IEZ7 315 aa10.41□□□□□ -0.74
CAPN1-223ENST00000533079 ZNF613Q6PF04 617 aa10.41□□□□□ -0.74
CAPN1-223ENST00000533079 ARL9Q6T311 187 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms