RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 C18orf12Q96KH6 178 aa11.92□□□□□ -0.5
TSPAN4-220ENST00000532375 DCLRE1CQ96SD1 692 aaKnown RBP11.92□□□□□ -0.5
TSPAN4-220ENST00000532375 CIB1Q99828 191 aa11.92□□□□□ -0.5
TSPAN4-220ENST00000532375 VRK1Q99986 396 aaPredicted RBP11.92□□□□□ -0.5
TSPAN4-220ENST00000532375 KRT84Q9NSB2 600 aa11.92□□□□□ -0.5
TSPAN4-220ENST00000532375 EIF3KQ9UBQ5 218 aaKnown RBP11.92□□□□□ -0.5
TSPAN4-220ENST00000532375 GRIP1Q9Y3R0 1128 aa11.92□□□□□ -0.5
TSPAN4-220ENST00000532375 ANK3Q12955 4377 aaKnown RBP11.91□□□□□ -0.5
TSPAN4-220ENST00000532375 PRR23D1E9PI22 279 aaPredicted RBP11.91□□□□□ -0.5
TSPAN4-220ENST00000532375 H7C1Q1 480 aa11.91□□□□□ -0.5
TSPAN4-220ENST00000532375 M0R233 179 aa11.91□□□□□ -0.5
TSPAN4-220ENST00000532375 ZNF593O00488 134 aaPredicted RBP11.91□□□□□ -0.5
TSPAN4-220ENST00000532375 PRKYO43930 277 aa11.91□□□□□ -0.5
TSPAN4-220ENST00000532375 ALPLP05186 524 aa11.91□□□□□ -0.5
TSPAN4-220ENST00000532375 ACSM4P0C7M7 580 aa11.91□□□□□ -0.5
TSPAN4-220ENST00000532375 PRR23D2P0DMB1 279 aaPredicted RBP11.91□□□□□ -0.5
TSPAN4-220ENST00000532375 ZNF823P16415 610 aa11.91□□□□□ -0.5
TSPAN4-220ENST00000532375 ENTPD1P49961 510 aa11.91□□□□□ -0.5
TSPAN4-220ENST00000532375 MMP15P51511 669 aa11.91□□□□□ -0.5
TSPAN4-220ENST00000532375 BLVRAP53004 296 aa11.91□□□□□ -0.5
TSPAN4-220ENST00000532375 NUDT6P53370 316 aa11.91□□□□□ -0.5
TSPAN4-220ENST00000532375 KLF3P57682 345 aaPredicted RBP11.91□□□□□ -0.5
TSPAN4-220ENST00000532375 PSG7Q13046 419 aa11.91□□□□□ -0.5
TSPAN4-220ENST00000532375 ZNF718Q3SXZ3 478 aa11.91□□□□□ -0.5
TSPAN4-220ENST00000532375 ICA1LQ8NDH6 482 aa11.91□□□□□ -0.5
TSPAN4-220ENST00000532375 C10orf105Q8TEF2 133 aa11.91□□□□□ -0.5
TSPAN4-220ENST00000532375 IPCEF1Q8WWN9 437 aaPredicted RBP11.91□□□□□ -0.5
TSPAN4-220ENST00000532375 GTF3AQ92664 365 aaKnown RBP11.91□□□□□ -0.5
TSPAN4-220ENST00000532375 RAB3IPQ96QF0 476 aaPredicted RBP11.91□□□□□ -0.5
TSPAN4-220ENST00000532375 PITX2Q99697 317 aa11.91□□□□□ -0.5
TSPAN4-220ENST00000532375 CDADC1Q9BWV3 514 aa11.91□□□□□ -0.5
TSPAN4-220ENST00000532375 GABARAPL3Q9BY60 117 aa11.91□□□□□ -0.5
TSPAN4-220ENST00000532375 OR51V1Q9H2C8 321 aa11.91□□□□□ -0.5
TSPAN4-220ENST00000532375 MS4A5Q9H3V2 200 aa11.91□□□□□ -0.5
TSPAN4-220ENST00000532375 ELOVL3Q9HB03 270 aa11.91□□□□□ -0.5
TSPAN4-220ENST00000532375 DDX28Q9NUL7 540 aaKnown RBP11.91□□□□□ -0.5
TSPAN4-220ENST00000532375 TVP23BQ9NYZ1 205 aa11.91□□□□□ -0.5
TSPAN4-220ENST00000532375 USE1Q9NZ43 259 aa11.91□□□□□ -0.5
TSPAN4-220ENST00000532375 TAAR3PQ9P1P4 343 aa11.91□□□□□ -0.5
TSPAN4-220ENST00000532375 KIF17Q9P2E2 1029 aa11.91□□□□□ -0.5
TSPAN4-220ENST00000532375 POLR1DQ9Y2S0 133 aa11.91□□□□□ -0.5
TSPAN4-220ENST00000532375 ABCA1O95477 2261 aa11.9□□□□□ -0.5
TSPAN4-220ENST00000532375 CCDC182A6NF36 153 aa11.9□□□□□ -0.5
TSPAN4-220ENST00000532375 VWC2LB2RUY7 222 aa11.9□□□□□ -0.5
TSPAN4-220ENST00000532375 H3BSA7 217 aa11.9□□□□□ -0.5
TSPAN4-220ENST00000532375 PRODHO43272 600 aa11.9□□□□□ -0.5
TSPAN4-220ENST00000532375 ABHD16AO95870 558 aa11.9□□□□□ -0.5
TSPAN4-220ENST00000532375 NAT2P11245 290 aa11.9□□□□□ -0.5
TSPAN4-220ENST00000532375 TUBG1P23258 451 aa11.9□□□□□ -0.5
TSPAN4-220ENST00000532375 GSTT1P30711 240 aa11.9□□□□□ -0.5
TSPAN4-220ENST00000532375 ECH1Q13011 328 aa11.9□□□□□ -0.5
TSPAN4-220ENST00000532375 SNAPC1Q16533 368 aa11.9□□□□□ -0.5
TSPAN4-220ENST00000532375 TMEM154Q6P9G4 183 aa11.9□□□□□ -0.5
TSPAN4-220ENST00000532375 DPY19L4Q7Z388 723 aa11.9□□□□□ -0.5
TSPAN4-220ENST00000532375 DCXRQ7Z4W1 244 aa11.9□□□□□ -0.5
TSPAN4-220ENST00000532375 OR6K6Q8NGW6 343 aa11.9□□□□□ -0.5
TSPAN4-220ENST00000532375 OR2AJ1Q8NGZ0 328 aa11.9□□□□□ -0.5
TSPAN4-220ENST00000532375 NEU4Q8WWR8 484 aaPredicted RBP11.9□□□□□ -0.5
TSPAN4-220ENST00000532375 ZMYND19Q96E35 227 aaPredicted RBP11.9□□□□□ -0.5
TSPAN4-220ENST00000532375 AMELYQ99218 206 aa11.9□□□□□ -0.5
TSPAN4-220ENST00000532375 ATF6BQ99941 703 aa11.9□□□□□ -0.5
TSPAN4-220ENST00000532375 SMR3AQ99954 134 aa11.9□□□□□ -0.5
TSPAN4-220ENST00000532375 C1QTNF5Q9BXJ0 243 aa11.9□□□□□ -0.5
TSPAN4-220ENST00000532375 REG4Q9BYZ8 158 aa11.9□□□□□ -0.5
TSPAN4-220ENST00000532375 RAB1BQ9H0U4 201 aa11.9□□□□□ -0.5
TSPAN4-220ENST00000532375 GSX1Q9H4S2 264 aaPredicted RBP11.9□□□□□ -0.5
TSPAN4-220ENST00000532375 TUBG2Q9NRH3 451 aa11.9□□□□□ -0.5
TSPAN4-220ENST00000532375 C5orf63A6NC05 138 aa11.89□□□□□ -0.51
TSPAN4-220ENST00000532375 C17orf100A8MU93 164 aa11.89□□□□□ -0.51
TSPAN4-220ENST00000532375 J3QW42 95 aa11.89□□□□□ -0.51
TSPAN4-220ENST00000532375 M0R129 80 aa11.89□□□□□ -0.51
TSPAN4-220ENST00000532375 NCR1O76036 304 aa11.89□□□□□ -0.51
TSPAN4-220ENST00000532375 HPXP02790 462 aa11.89□□□□□ -0.51
TSPAN4-220ENST00000532375 SPARCP09486 303 aa11.89□□□□□ -0.51
TSPAN4-220ENST00000532375 INHBBP09529 407 aa11.89□□□□□ -0.51
TSPAN4-220ENST00000532375 IGFBP5P24593 272 aa11.89□□□□□ -0.51
TSPAN4-220ENST00000532375 DSCR9P59020 149 aa11.89□□□□□ -0.51
TSPAN4-220ENST00000532375 KRTAP1-1Q07627 177 aa11.89□□□□□ -0.51
TSPAN4-220ENST00000532375 SLC35D3Q5M8T2 416 aa11.89□□□□□ -0.51
TSPAN4-220ENST00000532375 AADACL4Q5VUY2 407 aa11.89□□□□□ -0.51
TSPAN4-220ENST00000532375 ARL9Q6T311 187 aa11.89□□□□□ -0.51
TSPAN4-220ENST00000532375 UNQ6126/PRO20091Q6UXV3 157 aa11.89□□□□□ -0.51
TSPAN4-220ENST00000532375 CXXC5Q7LFL8 322 aaKnown RBP11.89□□□□□ -0.51
TSPAN4-220ENST00000532375 BCDIN3DQ7Z5W3 292 aaKnown RBP11.89□□□□□ -0.51
TSPAN4-220ENST00000532375 C10orf67Q8IYJ2 551 aa11.89□□□□□ -0.51
TSPAN4-220ENST00000532375 PQLC1Q8N2U9 271 aa11.89□□□□□ -0.51
TSPAN4-220ENST00000532375 HAVCR1Q96D42 359 aa11.89□□□□□ -0.51
TSPAN4-220ENST00000532375 TEAD3Q99594 435 aa11.89□□□□□ -0.51
TSPAN4-220ENST00000532375 SLC29A1Q99808 456 aa11.89□□□□□ -0.51
TSPAN4-220ENST00000532375 RBM4BQ9BQ04 359 aaKnown RBP11.89□□□□□ -0.51
TSPAN4-220ENST00000532375 ABHD6Q9BV23 337 aa11.89□□□□□ -0.51
TSPAN4-220ENST00000532375 TPK1Q9H3S4 243 aa11.89□□□□□ -0.51
TSPAN4-220ENST00000532375 DYNLRB1Q9NP97 96 aa11.89□□□□□ -0.51
TSPAN4-220ENST00000532375 SLCO1C1Q9NYB5 712 aa11.89□□□□□ -0.51
TSPAN4-220ENST00000532375 TLN2Q9Y4G6 2542 aa11.89□□□□□ -0.51
TSPAN4-220ENST00000532375 A0A1W2PPW3 197 aa11.88□□□□□ -0.51
TSPAN4-220ENST00000532375 RNF223E7ERA6 249 aa11.88□□□□□ -0.51
TSPAN4-220ENST00000532375 F5H5K5 113 aa11.88□□□□□ -0.51
TSPAN4-220ENST00000532375 LYNX1G3V0Z9 82 aa11.88□□□□□ -0.51
TSPAN4-220ENST00000532375 EI24O14681 340 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms