RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 NOTCH2NLQ7Z3S9 236 aa3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 MTERF4Q7Z6M4 381 aaKnown RBP3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 ZNF677Q86XU0 584 aa3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 BBS7Q8IWZ6 715 aa3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 C6orf223Q8N319 242 aa3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 MREGQ8N565 214 aa3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 LRRC52Q8N7C0 313 aa3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 LFNGQ8NES3 379 aa3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 OR4F15Q8NGB8 312 aa3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 ZFAND1Q8TCF1 268 aa3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 APH1BQ8WW43 257 aa3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 ESR2Q92731 530 aa3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 SLC25A38Q96DW6 304 aa3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 CMTM5Q96DZ9 223 aa3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 MED8Q96G25 268 aa3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 BTN2A3PQ96KV6 586 aa3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 OR5M11Q96RB7 305 aa3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 APOL4Q9BPW4 351 aa3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 FGFBP2Q9BYJ0 223 aa3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 API5Q9BZZ5 524 aaKnown RBP3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 CHRNA10Q9GZZ6 450 aa3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 ING2Q9H160 280 aa3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 UPF3AQ9H1J1 476 aaKnown RBP3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 PRORYQ9H606 182 aa3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 ASB8Q9H765 288 aa3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 SPANXB1Q9NS25 103 aaPredicted RBP3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 SLC39A1Q9NY26 324 aa3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 TREM2Q9NZC2 230 aa3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 APOBEC3BQ9UH17 382 aaKnown RBP3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 ZNF256Q9Y2P7 627 aaPredicted RBP3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 AP3M1Q9Y2T2 418 aa3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 OR51B2Q9Y5P1 312 aa3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 USH1CQ9Y6N9 552 aa3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 ARHGEF17Q96PE2 2063 aaPredicted RBP3.37□□□□□ -1.87
AC055878.1-201ENST00000531858 COL3A1P02461 1466 aaPredicted RBP3.37□□□□□ -1.87
AC055878.1-201ENST00000531858 A0A0B4J2E0 115 aa3.37□□□□□ -1.87
AC055878.1-201ENST00000531858 A0A1B0GX12 115 aa3.37□□□□□ -1.87
AC055878.1-201ENST00000531858 ERI2A8K979 691 aaKnown RBP3.37□□□□□ -1.87
AC055878.1-201ENST00000531858 VGLL3A8MV65 326 aa3.37□□□□□ -1.87
AC055878.1-201ENST00000531858 HIDE1A8MVS5 230 aa3.37□□□□□ -1.87
AC055878.1-201ENST00000531858 A8MXK9 166 aa3.37□□□□□ -1.87
AC055878.1-201ENST00000531858 F6UB75 175 aa3.37□□□□□ -1.87
AC055878.1-201ENST00000531858 HDAC3O15379 428 aa3.37□□□□□ -1.87
AC055878.1-201ENST00000531858 TRAPPC3O43617 180 aa3.37□□□□□ -1.87
AC055878.1-201ENST00000531858 LMX1BO60663 402 aa3.37□□□□□ -1.87
AC055878.1-201ENST00000531858 DPM1O60762 260 aa3.37□□□□□ -1.87
AC055878.1-201ENST00000531858 PSIP1O75475 530 aaKnown RBP3.37□□□□□ -1.87
AC055878.1-201ENST00000531858 KBTBD11O94819 623 aa3.37□□□□□ -1.87
AC055878.1-201ENST00000531858 AIFM1O95831 613 aa3.37□□□□□ -1.87
AC055878.1-201ENST00000531858 C6orf47O95873 294 aa3.37□□□□□ -1.87
AC055878.1-201ENST00000531858 SEMG1P04279 462 aa3.37□□□□□ -1.87
AC055878.1-201ENST00000531858 FOLR1P15328 257 aa3.37□□□□□ -1.87
AC055878.1-201ENST00000531858 HIST1H1CP16403 213 aaKnown RBP3.37□□□□□ -1.87
AC055878.1-201ENST00000531858 ATF6P18850 670 aa3.37□□□□□ -1.87
AC055878.1-201ENST00000531858 SHC1P29353 583 aa3.37□□□□□ -1.87
AC055878.1-201ENST00000531858 PFN2P35080 140 aa3.37□□□□□ -1.87
AC055878.1-201ENST00000531858 ACTR1BP42025 376 aa3.37□□□□□ -1.87
AC055878.1-201ENST00000531858 MAGEA3P43357 314 aa3.37□□□□□ -1.87
AC055878.1-201ENST00000531858 THBS3P49746 956 aa3.37□□□□□ -1.87
AC055878.1-201ENST00000531858 MLF1P58340 268 aa3.37□□□□□ -1.87
AC055878.1-201ENST00000531858 MXD1Q05195 221 aa3.37□□□□□ -1.87
AC055878.1-201ENST00000531858 ZNF763Q0D2J5 394 aa3.37□□□□□ -1.87
AC055878.1-201ENST00000531858 SLC1A5Q15758 541 aa3.37□□□□□ -1.87
AC055878.1-201ENST00000531858 POU2AF1Q16633 256 aa3.37□□□□□ -1.87
AC055878.1-201ENST00000531858 IMPG1Q17R60 797 aa3.37□□□□□ -1.87
AC055878.1-201ENST00000531858 ZNF718Q3SXZ3 478 aa3.37□□□□□ -1.87
AC055878.1-201ENST00000531858 TMEM31Q5JXX7 168 aa3.37□□□□□ -1.87
AC055878.1-201ENST00000531858 KHDRBS2Q5VWX1 349 aaKnown RBP3.37□□□□□ -1.87
AC055878.1-201ENST00000531858 CXCL17Q6UXB2 119 aa3.37□□□□□ -1.87
AC055878.1-201ENST00000531858 TMEM179Q6ZVK1 233 aa3.37□□□□□ -1.87
AC055878.1-201ENST00000531858 H2AFVQ71UI9 128 aa3.37□□□□□ -1.87
AC055878.1-201ENST00000531858 FUNDC1Q8IVP5 155 aa3.37□□□□□ -1.87
AC055878.1-201ENST00000531858 NAXDQ8IW45 347 aa3.37□□□□□ -1.87
AC055878.1-201ENST00000531858 ZADH2Q8N4Q0 377 aa3.37□□□□□ -1.87
AC055878.1-201ENST00000531858 NKAPP1Q8N9T2 125 aa3.37□□□□□ -1.87
AC055878.1-201ENST00000531858 CCDC112Q8NEF3 446 aa3.37□□□□□ -1.87
AC055878.1-201ENST00000531858 ATP6V1C2Q8NEY4 427 aa3.37□□□□□ -1.87
AC055878.1-201ENST00000531858 OR52E2Q8NGJ4 325 aa3.37□□□□□ -1.87
AC055878.1-201ENST00000531858 OR1N2Q8NGR9 330 aa3.37□□□□□ -1.87
AC055878.1-201ENST00000531858 SDR42E1Q8WUS8 393 aa3.37□□□□□ -1.87
AC055878.1-201ENST00000531858 TMEM234Q8WY98 164 aa3.37□□□□□ -1.87
AC055878.1-201ENST00000531858 ARPC1AQ92747 370 aa3.37□□□□□ -1.87
AC055878.1-201ENST00000531858 SEH1LQ96EE3 360 aa3.37□□□□□ -1.87
AC055878.1-201ENST00000531858 NICN1Q9BSH3 213 aa3.37□□□□□ -1.87
AC055878.1-201ENST00000531858 DSN1Q9H410 356 aa3.37□□□□□ -1.87
AC055878.1-201ENST00000531858 RNF167Q9H6Y7 350 aa3.37□□□□□ -1.87
AC055878.1-201ENST00000531858 ASCL3Q9NQ33 180 aa3.37□□□□□ -1.87
AC055878.1-201ENST00000531858 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.37□□□□□ -1.87
AC055878.1-201ENST00000531858 PLEKHJ1Q9NW61 149 aa3.37□□□□□ -1.87
AC055878.1-201ENST00000531858 SLC25A37Q9NYZ2 338 aa3.37□□□□□ -1.87
AC055878.1-201ENST00000531858 FBXL3Q9UKT7 428 aa3.37□□□□□ -1.87
AC055878.1-201ENST00000531858 UGT2A1Q9Y4X1 527 aa3.37□□□□□ -1.87
AC055878.1-201ENST00000531858 KLF12Q9Y4X4 402 aa3.37□□□□□ -1.87
AC055878.1-201ENST00000531858 EVPLQ92817 2033 aa3.37□□□□□ -1.87
AC055878.1-201ENST00000531858 ABCB11O95342 1321 aa3.37□□□□□ -1.87
AC055878.1-201ENST00000531858 MROH7Q68CQ1 1323 aa3.37□□□□□ -1.87
AC055878.1-201ENST00000531858 IGHV2OR16-5A0A0B4J2B6 119 aa3.36□□□□□ -1.87
AC055878.1-201ENST00000531858 NCBP2LA6PVI3 153 aaKnown RBP3.36□□□□□ -1.87
AC055878.1-201ENST00000531858 FAM166BA8MTA8 275 aa3.36□□□□□ -1.87
AC055878.1-201ENST00000531858 SLC31A2O15432 143 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms