RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 KRT72Q14CN4 511 aa14.17□□□□□ -0.14
CPSF1-207ENST00000531727 ZMYND11Q15326 602 aa14.17□□□□□ -0.14
CPSF1-207ENST00000531727 HIST2H3PS2Q5TEC6 136 aa14.17□□□□□ -0.14
CPSF1-207ENST00000531727 PGM2L1Q6PCE3 622 aa14.17□□□□□ -0.14
CPSF1-207ENST00000531727 DNM1P34Q6PK57 102 aa14.17□□□□□ -0.14
CPSF1-207ENST00000531727 FBXW12Q6X9E4 464 aa14.17□□□□□ -0.14
CPSF1-207ENST00000531727 HIST2H3AQ71DI3 136 aa14.17□□□□□ -0.14
CPSF1-207ENST00000531727 OR5L1Q8NGL2 311 aa14.17□□□□□ -0.14
CPSF1-207ENST00000531727 OR52J3Q8NH60 311 aa14.17□□□□□ -0.14
CPSF1-207ENST00000531727 GCDHQ92947 438 aaPredicted RBP14.17□□□□□ -0.14
CPSF1-207ENST00000531727 TSSK2Q96PF2 358 aa14.17□□□□□ -0.14
CPSF1-207ENST00000531727 OR2V2Q96R30 315 aa14.17□□□□□ -0.14
CPSF1-207ENST00000531727 GPA33Q99795 319 aa14.17□□□□□ -0.14
CPSF1-207ENST00000531727 ESM1Q9NQ30 184 aa14.17□□□□□ -0.14
CPSF1-207ENST00000531727 MMP26Q9NRE1 261 aa14.17□□□□□ -0.14
CPSF1-207ENST00000531727 PTTG3PQ9NZH4 202 aa14.17□□□□□ -0.14
CPSF1-207ENST00000531727 ADA2Q9NZK5 511 aa14.17□□□□□ -0.14
CPSF1-207ENST00000531727 POLR3KQ9Y2Y1 108 aaPredicted RBP14.17□□□□□ -0.14
CPSF1-207ENST00000531727 LHFPL6Q9Y693 200 aa14.17□□□□□ -0.14
CPSF1-207ENST00000531727 F5H0A9 414 aaPredicted RBP14.16□□□□□ -0.14
CPSF1-207ENST00000531727 DCTN6O00399 190 aa14.16□□□□□ -0.14
CPSF1-207ENST00000531727 PPP1R3DO95685 299 aa14.16□□□□□ -0.14
CPSF1-207ENST00000531727 GPANK1O95872 356 aa14.16□□□□□ -0.14
CPSF1-207ENST00000531727 FPR2P25090 351 aa14.16□□□□□ -0.14
CPSF1-207ENST00000531727 CRABP1P29762 137 aa14.16□□□□□ -0.14
CPSF1-207ENST00000531727 PRDX6P30041 224 aa14.16□□□□□ -0.14
CPSF1-207ENST00000531727 MMP16P51512 607 aa14.16□□□□□ -0.14
CPSF1-207ENST00000531727 HLXQ14774 488 aaPredicted RBP14.16□□□□□ -0.14
CPSF1-207ENST00000531727 SLC27A4Q6P1M0 643 aa14.16□□□□□ -0.14
CPSF1-207ENST00000531727 OR5AS1Q8N127 324 aa14.16□□□□□ -0.14
CPSF1-207ENST00000531727 DEFB108BQ8NET1 73 aa14.16□□□□□ -0.14
CPSF1-207ENST00000531727 GJC3Q8NFK1 279 aa14.16□□□□□ -0.14
CPSF1-207ENST00000531727 FANK1Q8TC84 345 aa14.16□□□□□ -0.14
CPSF1-207ENST00000531727 DVL3Q92997 716 aaPredicted RBP14.16□□□□□ -0.14
CPSF1-207ENST00000531727 POP5Q969H6 163 aaKnown RBP14.16□□□□□ -0.14
CPSF1-207ENST00000531727 APOBEC3DQ96AK3 386 aaPredicted RBP14.16□□□□□ -0.14
CPSF1-207ENST00000531727 ERMAPQ96PL5 475 aaPredicted RBP14.16□□□□□ -0.14
CPSF1-207ENST00000531727 COQ7Q99807 217 aa14.16□□□□□ -0.14
CPSF1-207ENST00000531727 ELAC2Q9BQ52 826 aaKnown RBP14.16□□□□□ -0.14
CPSF1-207ENST00000531727 HDHD2Q9H0R4 259 aa14.16□□□□□ -0.14
CPSF1-207ENST00000531727 GORASP2Q9H8Y8 452 aa14.16□□□□□ -0.14
CPSF1-207ENST00000531727 GCM1Q9NP62 436 aa14.16□□□□□ -0.14
CPSF1-207ENST00000531727 ARHGAP32A7KAX9 2087 aa14.16□□□□□ -0.14
CPSF1-207ENST00000531727 TENM1Q9UKZ4 2725 aa14.15□□□□□ -0.14
CPSF1-207ENST00000531727 IGLV1-36A0A0B4J1U3 117 aa14.15□□□□□ -0.14
CPSF1-207ENST00000531727 A8MXK9 166 aa14.15□□□□□ -0.14
CPSF1-207ENST00000531727 TRAPPC2LH3BP13 241 aa14.15□□□□□ -0.14
CPSF1-207ENST00000531727 TMEM178BH3BS89 294 aa14.15□□□□□ -0.14
CPSF1-207ENST00000531727 IFNL4K9M1U5 179 aa14.15□□□□□ -0.14
CPSF1-207ENST00000531727 ZNF12P17014 697 aa14.15□□□□□ -0.14
CPSF1-207ENST00000531727 MDH2P40926 338 aaKnown RBP14.15□□□□□ -0.14
CPSF1-207ENST00000531727 CENPAP49450 140 aa14.15□□□□□ -0.14
CPSF1-207ENST00000531727 SMIM11AP58511 58 aa14.15□□□□□ -0.14
CPSF1-207ENST00000531727 SEC61A1P61619 476 aaKnown RBP14.15□□□□□ -0.14
CPSF1-207ENST00000531727 ZNF154Q13106 437 aa14.15□□□□□ -0.14
CPSF1-207ENST00000531727 MEP1BQ16820 701 aa14.15□□□□□ -0.14
CPSF1-207ENST00000531727 OR2T2Q6IF00 324 aa14.15□□□□□ -0.14
CPSF1-207ENST00000531727 RNF148Q8N7C7 305 aa14.15□□□□□ -0.14
CPSF1-207ENST00000531727 ZDHHC22Q8N966 263 aa14.15□□□□□ -0.14
CPSF1-207ENST00000531727 ATG16L2Q8NAA4 619 aa14.15□□□□□ -0.14
CPSF1-207ENST00000531727 OR8G5Q8NG78 346 aa14.15□□□□□ -0.14
CPSF1-207ENST00000531727 OR13G1Q8NGZ3 307 aa14.15□□□□□ -0.14
CPSF1-207ENST00000531727 C22orf15Q8WYQ4 148 aa14.15□□□□□ -0.14
CPSF1-207ENST00000531727 MEGF10Q96KG7 1140 aa14.15□□□□□ -0.14
CPSF1-207ENST00000531727 PLA2G12AQ9BZM1 189 aa14.15□□□□□ -0.14
CPSF1-207ENST00000531727 NTN4Q9HB63 628 aa14.15□□□□□ -0.14
CPSF1-207ENST00000531727 B9D1Q9UPM9 204 aa14.15□□□□□ -0.14
CPSF1-207ENST00000531727 V9GYQ6 96 aa14.15□□□□□ -0.14
CPSF1-207ENST00000531727 GADD45GO95257 159 aa14.14□□□□□ -0.15
CPSF1-207ENST00000531727 SEMG1P04279 462 aa14.14□□□□□ -0.15
CPSF1-207ENST00000531727 SLC6A6P31641 620 aa14.14□□□□□ -0.15
CPSF1-207ENST00000531727 SPIBQ01892 262 aa14.14□□□□□ -0.15
CPSF1-207ENST00000531727 COX10Q12887 443 aa14.14□□□□□ -0.15
CPSF1-207ENST00000531727 TUSC1Q2TAM9 212 aa14.14□□□□□ -0.15
CPSF1-207ENST00000531727 RFX4Q33E94 735 aa14.14□□□□□ -0.15
CPSF1-207ENST00000531727 ARMCX4Q5H9R4 360 aa14.14□□□□□ -0.15
CPSF1-207ENST00000531727 LEG1Q6P5S2 330 aa14.14□□□□□ -0.15
CPSF1-207ENST00000531727 CORO6Q6QEF8 472 aa14.14□□□□□ -0.15
CPSF1-207ENST00000531727 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.14□□□□□ -0.15
CPSF1-207ENST00000531727 JAZF1Q86VZ6 243 aa14.14□□□□□ -0.15
CPSF1-207ENST00000531727 OR6V1Q8N148 313 aa14.14□□□□□ -0.15
CPSF1-207ENST00000531727 MUC20Q8N307 709 aaPredicted RBP14.14□□□□□ -0.15
CPSF1-207ENST00000531727 C3orf56Q8N813 242 aa14.14□□□□□ -0.15
CPSF1-207ENST00000531727 SLC26A10Q8NG04 563 aa14.14□□□□□ -0.15
CPSF1-207ENST00000531727 OR10AD1Q8NGE0 317 aa14.14□□□□□ -0.15
CPSF1-207ENST00000531727 PYURFQ96I23 114 aa14.14□□□□□ -0.15
CPSF1-207ENST00000531727 ZNF582Q96NG8 517 aaPredicted RBP14.14□□□□□ -0.15
CPSF1-207ENST00000531727 OR52D1Q9H346 318 aa14.14□□□□□ -0.15
CPSF1-207ENST00000531727 SRA1Q9HD15 236 aaKnown RBP14.14□□□□□ -0.15
CPSF1-207ENST00000531727 INSIG2Q9Y5U4 225 aa14.14□□□□□ -0.15
CPSF1-207ENST00000531727 AUP1Q9Y679 476 aa14.14□□□□□ -0.15
CPSF1-207ENST00000531727 NBEAL1Q6ZS30 2694 aa14.14□□□□□ -0.15
CPSF1-207ENST00000531727 IQCF6A8MYZ5 107 aa14.13□□□□□ -0.15
CPSF1-207ENST00000531727 ARPC3O15145 178 aa14.13□□□□□ -0.15
CPSF1-207ENST00000531727 RENP00797 406 aa14.13□□□□□ -0.15
CPSF1-207ENST00000531727 HIST1H1CP16403 213 aaKnown RBP14.13□□□□□ -0.15
CPSF1-207ENST00000531727 FPR3P25089 353 aa14.13□□□□□ -0.15
CPSF1-207ENST00000531727 SRP9P49458 86 aaKnown RBP14.13□□□□□ -0.15
CPSF1-207ENST00000531727 UBA52P62987 128 aaKnown RBP14.13□□□□□ -0.15
CPSF1-207ENST00000531727 RSPO1Q2MKA7 263 aaPredicted RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms