RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 RPL4P36578 427 aaKnown RBP7.68□□□□□ -1.18
NEDD8-206ENST00000531430 CFHR2P36980 270 aa7.68□□□□□ -1.18
NEDD8-206ENST00000531430 PMELP40967 661 aa7.68□□□□□ -1.18
NEDD8-206ENST00000531430 OR1E2P47887 323 aa7.68□□□□□ -1.18
NEDD8-206ENST00000531430 IDH3AP50213 366 aa7.68□□□□□ -1.18
NEDD8-206ENST00000531430 PRSS12P56730 875 aa7.68□□□□□ -1.18
NEDD8-206ENST00000531430 ARF6P62330 175 aa7.68□□□□□ -1.18
NEDD8-206ENST00000531430 C2orf68Q2NKX9 166 aa7.68□□□□□ -1.18
NEDD8-206ENST00000531430 ZNF404Q494X3 552 aa7.68□□□□□ -1.18
NEDD8-206ENST00000531430 INTS11Q5TA45 600 aaKnown RBP7.68□□□□□ -1.18
NEDD8-206ENST00000531430 CD276Q5ZPR3 534 aa7.68□□□□□ -1.18
NEDD8-206ENST00000531430 DLEU7Q6UYE1 221 aa7.68□□□□□ -1.18
NEDD8-206ENST00000531430 DHDDSQ86SQ9 333 aa7.68□□□□□ -1.18
NEDD8-206ENST00000531430 SYT9Q86SS6 491 aa7.68□□□□□ -1.18
NEDD8-206ENST00000531430 TMEM86BQ8N661 226 aa7.68□□□□□ -1.18
NEDD8-206ENST00000531430 C11orf44Q8N8P7 122 aa7.68□□□□□ -1.18
NEDD8-206ENST00000531430 OR8G5Q8NG78 346 aa7.68□□□□□ -1.18
NEDD8-206ENST00000531430 OR10A6Q8NH74 314 aa7.68□□□□□ -1.18
NEDD8-206ENST00000531430 FNDC8Q8TC99 324 aa7.68□□□□□ -1.18
NEDD8-206ENST00000531430 TAMM41Q96BW9 452 aa7.68□□□□□ -1.18
NEDD8-206ENST00000531430 NMD3Q96D46 503 aaKnown RBP7.68□□□□□ -1.18
NEDD8-206ENST00000531430 EBF4Q9BQW3 602 aa7.68□□□□□ -1.18
NEDD8-206ENST00000531430 PRDM13Q9H4Q3 707 aa7.68□□□□□ -1.18
NEDD8-206ENST00000531430 TUBG2Q9NRH3 451 aa7.68□□□□□ -1.18
NEDD8-206ENST00000531430 DNAJB11Q9UBS4 358 aa7.68□□□□□ -1.18
NEDD8-206ENST00000531430 TMCC3Q9ULS5 477 aa7.68□□□□□ -1.18
NEDD8-206ENST00000531430 NDUFAF1Q9Y375 327 aa7.68□□□□□ -1.18
NEDD8-206ENST00000531430 POMT1Q9Y6A1 747 aa7.68□□□□□ -1.18
NEDD8-206ENST00000531430 TRAV27A0A087WT01 109 aa7.67□□□□□ -1.18
NEDD8-206ENST00000531430 TRBV5-3A0A0A0MS03 114 aa7.67□□□□□ -1.18
NEDD8-206ENST00000531430 IGHV1-69DA0A0B4J2H0 117 aa7.67□□□□□ -1.18
NEDD8-206ENST00000531430 A0A0U1RQK1 487 aa7.67□□□□□ -1.18
NEDD8-206ENST00000531430 ZNF816-ZNF321PA0A0X1KG74 233 aa7.67□□□□□ -1.18
NEDD8-206ENST00000531430 A0A1W2PRD5 423 aa7.67□□□□□ -1.18
NEDD8-206ENST00000531430 A0A1W2PRF3 423 aa7.67□□□□□ -1.18
NEDD8-206ENST00000531430 A0A1W2PRM7 423 aa7.67□□□□□ -1.18
NEDD8-206ENST00000531430 ELOVL7A1L3X0 281 aa7.67□□□□□ -1.18
NEDD8-206ENST00000531430 ANKRD61A6NGH8 418 aa7.67□□□□□ -1.18
NEDD8-206ENST00000531430 A6NIZ1 184 aa7.67□□□□□ -1.18
NEDD8-206ENST00000531430 C22orf46C9J442 243 aa7.67□□□□□ -1.18
NEDD8-206ENST00000531430 XKRYO14609 159 aa7.67□□□□□ -1.18
NEDD8-206ENST00000531430 TNFRSF13BO14836 293 aaPredicted RBP7.67□□□□□ -1.18
NEDD8-206ENST00000531430 ANGPT2O15123 496 aa7.67□□□□□ -1.18
NEDD8-206ENST00000531430 PIN1P1O15428 100 aa7.67□□□□□ -1.18
NEDD8-206ENST00000531430 ADAM20O43506 726 aa7.67□□□□□ -1.18
NEDD8-206ENST00000531430 CLPXO76031 633 aa7.67□□□□□ -1.18
NEDD8-206ENST00000531430 IGHV1-69P01742 117 aa7.67□□□□□ -1.18
NEDD8-206ENST00000531430 COX5BP10606 129 aa7.67□□□□□ -1.18
NEDD8-206ENST00000531430 RBM34P42696 430 aaKnown RBP7.67□□□□□ -1.18
NEDD8-206ENST00000531430 YAP1P46937 504 aaKnown RBP7.67□□□□□ -1.18
NEDD8-206ENST00000531430 PROK1P58294 105 aa7.67□□□□□ -1.18
NEDD8-206ENST00000531430 RAP1BP61224 184 aa7.67□□□□□ -1.18
NEDD8-206ENST00000531430 RAP1AP62834 184 aa7.67□□□□□ -1.18
NEDD8-206ENST00000531430 HOXA4Q00056 320 aaPredicted RBP7.67□□□□□ -1.18
NEDD8-206ENST00000531430 POU4F2Q12837 409 aa7.67□□□□□ -1.18
NEDD8-206ENST00000531430 NFYCQ13952 458 aa7.67□□□□□ -1.18
NEDD8-206ENST00000531430 OR8B8Q15620 311 aa7.67□□□□□ -1.18
NEDD8-206ENST00000531430 PRAMEF6Q5VXH4 476 aa7.67□□□□□ -1.18
NEDD8-206ENST00000531430 DHRS7BQ6IAN0 325 aaPredicted RBP7.67□□□□□ -1.18
NEDD8-206ENST00000531430 GDPGP1Q6ZNW5 385 aa7.67□□□□□ -1.18
NEDD8-206ENST00000531430 DCDC5Q6ZRR9 648 aa7.67□□□□□ -1.18
NEDD8-206ENST00000531430 Q6ZSV7 163 aa7.67□□□□□ -1.18
NEDD8-206ENST00000531430 OR1F12Q8NHA8 337 aa7.67□□□□□ -1.18
NEDD8-206ENST00000531430 MRAPQ8TCY5 172 aa7.67□□□□□ -1.18
NEDD8-206ENST00000531430 RASSF5Q8WWW0 418 aa7.67□□□□□ -1.18
NEDD8-206ENST00000531430 BPIFA2Q96DR5 249 aa7.67□□□□□ -1.18
NEDD8-206ENST00000531430 WDFY2Q96P53 400 aa7.67□□□□□ -1.18
NEDD8-206ENST00000531430 TBX15Q96SF7 602 aa7.67□□□□□ -1.18
NEDD8-206ENST00000531430 CGREF1Q99674 301 aa7.67□□□□□ -1.18
NEDD8-206ENST00000531430 ZNF426Q9BUY5 554 aa7.67□□□□□ -1.18
NEDD8-206ENST00000531430 HCAR1Q9BXC0 346 aa7.67□□□□□ -1.18
NEDD8-206ENST00000531430 DPAGT1Q9H3H5 408 aa7.67□□□□□ -1.18
NEDD8-206ENST00000531430 GRHPRQ9UBQ7 328 aa7.67□□□□□ -1.18
NEDD8-206ENST00000531430 POLR1DQ9Y2S0 133 aa7.67□□□□□ -1.18
NEDD8-206ENST00000531430 BTBD17A6NE02 478 aa7.66□□□□□ -1.18
NEDD8-206ENST00000531430 EFCAB9A8MZ26 197 aa7.66□□□□□ -1.18
NEDD8-206ENST00000531430 PHYHO14832 338 aa7.66□□□□□ -1.18
NEDD8-206ENST00000531430 MLNRO43193 412 aa7.66□□□□□ -1.18
NEDD8-206ENST00000531430 ICMTO60725 284 aa7.66□□□□□ -1.18
NEDD8-206ENST00000531430 OR5F1O95221 314 aa7.66□□□□□ -1.18
NEDD8-206ENST00000531430 LIPFP07098 398 aa7.66□□□□□ -1.18
NEDD8-206ENST00000531430 IFNA8P32881 189 aa7.66□□□□□ -1.18
NEDD8-206ENST00000531430 IER3P46695 156 aa7.66□□□□□ -1.18
NEDD8-206ENST00000531430 MAGOHP61326 146 aaKnown RBP7.66□□□□□ -1.18
NEDD8-206ENST00000531430 EGR3Q06889 387 aa7.66□□□□□ -1.18
NEDD8-206ENST00000531430 Q6ZTK2 550 aa7.66□□□□□ -1.18
NEDD8-206ENST00000531430 CROCCP2Q86T23 111 aa7.66□□□□□ -1.18
NEDD8-206ENST00000531430 OAFQ86UD1 273 aa7.66□□□□□ -1.18
NEDD8-206ENST00000531430 MREGQ8N565 214 aa7.66□□□□□ -1.18
NEDD8-206ENST00000531430 PNLDC1Q8NA58 520 aaKnown RBP7.66□□□□□ -1.18
NEDD8-206ENST00000531430 PCYOX1LQ8NBM8 494 aa7.66□□□□□ -1.18
NEDD8-206ENST00000531430 RASD2Q96D21 266 aa7.66□□□□□ -1.18
NEDD8-206ENST00000531430 TPD52L3Q96J77 140 aa7.66□□□□□ -1.18
NEDD8-206ENST00000531430 CCDC28BQ9BUN5 200 aa7.66□□□□□ -1.18
NEDD8-206ENST00000531430 PARD6BQ9BYG5 372 aa7.66□□□□□ -1.18
NEDD8-206ENST00000531430 RHCGQ9UBD6 479 aa7.66□□□□□ -1.18
NEDD8-206ENST00000531430 BAG5Q9UL15 447 aa7.66□□□□□ -1.18
NEDD8-206ENST00000531430 HIF3AQ9Y2N7 669 aa7.66□□□□□ -1.18
NEDD8-206ENST00000531430 COA3Q9Y2R0 106 aaPredicted RBP7.66□□□□□ -1.18
NEDD8-206ENST00000531430 RER1O15258 196 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms