RNA–Protein interactions for RNA: ENST00000530309.1

CASP4-208, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-208ENST00000530309 TMEM205Q6UW68 189 aa3.46□□□□□ -1.86
CASP4-208ENST00000530309 SSX9Q7RTT3 188 aa3.46□□□□□ -1.86
CASP4-208ENST00000530309 MRPL55Q7Z7F7 128 aaKnown RBP3.46□□□□□ -1.86
CASP4-208ENST00000530309 CALHM1Q8IU99 346 aa3.46□□□□□ -1.86
CASP4-208ENST00000530309 OR52E2Q8NGJ4 325 aa3.46□□□□□ -1.86
CASP4-208ENST00000530309 OR9G4Q8NGQ1 327 aa3.46□□□□□ -1.86
CASP4-208ENST00000530309 LRRC29Q8WV35 223 aa3.46□□□□□ -1.86
CASP4-208ENST00000530309 APH1BQ8WW43 257 aa3.46□□□□□ -1.86
CASP4-208ENST00000530309 NARS2Q96I59 477 aaKnown RBP3.46□□□□□ -1.86
CASP4-208ENST00000530309 NTN4Q9HB63 628 aa3.46□□□□□ -1.86
CASP4-208ENST00000530309 C20orf96Q9NUD7 363 aaPredicted RBP3.46□□□□□ -1.86
CASP4-208ENST00000530309 ZNF282Q9UDV7 671 aaPredicted RBP3.46□□□□□ -1.86
CASP4-208ENST00000530309 COL22A1Q8NFW1 1626 aaPredicted RBP3.45□□□□□ -1.86
CASP4-208ENST00000530309 KBTBD11-OT1A0A1B0GTJ5 212 aa3.45□□□□□ -1.86
CASP4-208ENST00000530309 ZNF207O43670 478 aaKnown RBP3.45□□□□□ -1.86
CASP4-208ENST00000530309 CCNB2O95067 398 aa3.45□□□□□ -1.86
CASP4-208ENST00000530309 OR56A5P0C7T3 313 aa3.45□□□□□ -1.86
CASP4-208ENST00000530309 HMOX2P30519 316 aa3.45□□□□□ -1.86
CASP4-208ENST00000530309 PMELP40967 661 aa3.45□□□□□ -1.86
CASP4-208ENST00000530309 PRR3P79522 188 aaKnown RBP3.45□□□□□ -1.86
CASP4-208ENST00000530309 SEMG2Q02383 582 aa3.45□□□□□ -1.86
CASP4-208ENST00000530309 IFT88Q13099 833 aa3.45□□□□□ -1.86
CASP4-208ENST00000530309 AVPI1Q5T686 147 aa3.45□□□□□ -1.86
CASP4-208ENST00000530309 TWF2Q6IBS0 349 aaKnown RBP3.45□□□□□ -1.86
CASP4-208ENST00000530309 TMEM53Q6P2H8 277 aa3.45□□□□□ -1.86
CASP4-208ENST00000530309 SPESP1Q6UW49 350 aa3.45□□□□□ -1.86
CASP4-208ENST00000530309 MBOAT2Q6ZWT7 520 aa3.45□□□□□ -1.86
CASP4-208ENST00000530309 OR8U1Q8NH10 309 aa3.45□□□□□ -1.86
CASP4-208ENST00000530309 COL21A1Q96P44 957 aa3.45□□□□□ -1.86
CASP4-208ENST00000530309 BPIFA3Q9BQP9 254 aa3.45□□□□□ -1.86
CASP4-208ENST00000530309 ZYG11BQ9C0D3 744 aa3.45□□□□□ -1.86
CASP4-208ENST00000530309 EDA2RQ9HAV5 297 aa3.45□□□□□ -1.86
CASP4-208ENST00000530309 ZDHHC4Q9NPG8 344 aa3.45□□□□□ -1.86
CASP4-208ENST00000530309 SIRT7Q9NRC8 400 aa3.45□□□□□ -1.86
CASP4-208ENST00000530309 CLN8Q9UBY8 286 aa3.45□□□□□ -1.86
CASP4-208ENST00000530309 HYOU1Q9Y4L1 999 aa3.45□□□□□ -1.86
CASP4-208ENST00000530309 RFNGQ9Y644 331 aa3.45□□□□□ -1.86
CASP4-208ENST00000530309 INSRP06213 1382 aa3.45□□□□□ -1.86
CASP4-208ENST00000530309 RRBP1Q9P2E9 1410 aaKnown RBP3.44□□□□□ -1.86
CASP4-208ENST00000530309 NCBP2LA6PVI3 153 aaKnown RBP3.44□□□□□ -1.86
CASP4-208ENST00000530309 CDC40O60508 579 aaKnown RBP eCLIP3.44□□□□□ -1.86
CASP4-208ENST00000530309 APCSP02743 223 aa3.44□□□□□ -1.86
CASP4-208ENST00000530309 CTSLP07711 333 aa3.44□□□□□ -1.86
CASP4-208ENST00000530309 NPY1RP25929 384 aa3.44□□□□□ -1.86
CASP4-208ENST00000530309 MOBPQ13875 183 aa3.44□□□□□ -1.86
CASP4-208ENST00000530309 LCE3AQ5TA76 89 aa3.44□□□□□ -1.86
CASP4-208ENST00000530309 BHLHA15Q7RTS1 189 aaPredicted RBP3.44□□□□□ -1.86
CASP4-208ENST00000530309 PQLC3Q8N755 202 aa3.44□□□□□ -1.86
CASP4-208ENST00000530309 COX18Q8N8Q8 333 aa3.44□□□□□ -1.86
CASP4-208ENST00000530309 TET2Q6N021 2002 aaPredicted RBP3.44□□□□□ -1.86
CASP4-208ENST00000530309 CLIP1P30622 1438 aa3.44□□□□□ -1.86
CASP4-208ENST00000530309 NACADO15069 1562 aa3.43□□□□□ -1.86
CASP4-208ENST00000530309 SERTM2A0A1B0GWG4 89 aa3.43□□□□□ -1.86
CASP4-208ENST00000530309 H7C417 338 aa3.43□□□□□ -1.86
CASP4-208ENST00000530309 WRBO00258 174 aa3.43□□□□□ -1.86
CASP4-208ENST00000530309 BPY2O14599 106 aa3.43□□□□□ -1.86
CASP4-208ENST00000530309 CACNG3O60359 315 aa3.43□□□□□ -1.86
CASP4-208ENST00000530309 FOXH1O75593 365 aa3.43□□□□□ -1.86
CASP4-208ENST00000530309 LSM8O95777 96 aaKnown RBP3.43□□□□□ -1.86
CASP4-208ENST00000530309 CD160O95971 181 aa3.43□□□□□ -1.86
CASP4-208ENST00000530309 CDKN2DP55273 166 aa3.43□□□□□ -1.86
CASP4-208ENST00000530309 KRTAP10-8P60410 259 aa3.43□□□□□ -1.86
CASP4-208ENST00000530309 SNRNP35Q16560 246 aaKnown RBP3.43□□□□□ -1.86
CASP4-208ENST00000530309 TCEAL5Q5H9L2 206 aa3.43□□□□□ -1.86
CASP4-208ENST00000530309 TPTE2P1Q5T6R2 138 aa3.43□□□□□ -1.86
CASP4-208ENST00000530309 C12orf54Q6X4T0 127 aa3.43□□□□□ -1.86
CASP4-208ENST00000530309 FAM71AQ8IYT1 594 aa3.43□□□□□ -1.86
CASP4-208ENST00000530309 CBR4Q8N4T8 237 aa3.43□□□□□ -1.86
CASP4-208ENST00000530309 C11orf72Q8NBR9 251 aa3.43□□□□□ -1.86
CASP4-208ENST00000530309 TCEAL3Q969E4 200 aa3.43□□□□□ -1.86
CASP4-208ENST00000530309 PTX4Q96A99 478 aa3.43□□□□□ -1.86
CASP4-208ENST00000530309 DCPSQ96C86 337 aaKnown RBP3.43□□□□□ -1.86
CASP4-208ENST00000530309 FLYWCH2Q96CP2 140 aaKnown RBP3.43□□□□□ -1.86
CASP4-208ENST00000530309 RBMXL1Q96E39 390 aaKnown RBP3.43□□□□□ -1.86
CASP4-208ENST00000530309 UCK2Q9BZX2 261 aa3.43□□□□□ -1.86
CASP4-208ENST00000530309 TMEM38AQ9H6F2 299 aa3.43□□□□□ -1.86
CASP4-208ENST00000530309 AUNIPQ9H7T9 357 aa3.43□□□□□ -1.86
CASP4-208ENST00000530309 BEX1Q9HBH7 125 aa3.43□□□□□ -1.86
CASP4-208ENST00000530309 CCNB1IP1Q9NPC3 277 aa3.43□□□□□ -1.86
CASP4-208ENST00000530309 AGPAT4Q9NRZ5 378 aa3.43□□□□□ -1.86
CASP4-208ENST00000530309 MTFP1Q9UDX5 166 aa3.43□□□□□ -1.86
CASP4-208ENST00000530309 MAPKBP1O60336 1514 aa3.43□□□□□ -1.86
CASP4-208ENST00000530309 PTPRTO14522 1441 aa3.43□□□□□ -1.86
CASP4-208ENST00000530309 KCNE1BA0A087WTH5 132 aa3.42□□□□□ -1.86
CASP4-208ENST00000530309 IGHV1OR15-9A0A0B4J2B8 117 aa3.42□□□□□ -1.86
CASP4-208ENST00000530309 A6NDN8 102 aa3.42□□□□□ -1.86
CASP4-208ENST00000530309 DNASE2O00115 360 aaPredicted RBP3.42□□□□□ -1.86
CASP4-208ENST00000530309 SLC9A3R1O14745 358 aaPredicted RBP3.42□□□□□ -1.86
CASP4-208ENST00000530309 DNAJB6O75190 326 aa3.42□□□□□ -1.86
CASP4-208ENST00000530309 SEMA3DO95025 777 aa3.42□□□□□ -1.86
CASP4-208ENST00000530309 HBE1P02100 147 aa3.42□□□□□ -1.86
CASP4-208ENST00000530309 LINC00869P0C866 280 aa3.42□□□□□ -1.86
CASP4-208ENST00000530309 SYNJ2BPP57105 145 aa3.42□□□□□ -1.86
CASP4-208ENST00000530309 GBE1Q04446 702 aa3.42□□□□□ -1.86
CASP4-208ENST00000530309 IL18Q14116 193 aa3.42□□□□□ -1.86
CASP4-208ENST00000530309 KIR2DS1Q14954 304 aa3.42□□□□□ -1.86
CASP4-208ENST00000530309 SNX20Q7Z614 316 aa3.42□□□□□ -1.86
CASP4-208ENST00000530309 CBLN2Q8IUK8 224 aa3.42□□□□□ -1.86
CASP4-208ENST00000530309 CDKL3Q8IVW4 592 aaPredicted RBP3.42□□□□□ -1.86
CASP4-208ENST00000530309 OFCC1Q8IZS5 231 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms