RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 STOML3Q8TAV4 291 aa11.14□□□□□ -0.63
SCN3B-206ENST00000530277 ASB17Q8WXJ9 295 aa11.14□□□□□ -0.63
SCN3B-206ENST00000530277 CHRDQ9H2X0 955 aa11.14□□□□□ -0.63
SCN3B-206ENST00000530277 UBE2ZQ9H832 354 aaPredicted RBP11.14□□□□□ -0.63
SCN3B-206ENST00000530277 CLEC1BQ9P126 229 aa11.14□□□□□ -0.63
SCN3B-206ENST00000530277 HIF3AQ9Y2N7 669 aa11.14□□□□□ -0.63
SCN3B-206ENST00000530277 ERVH48-1M5A8F1 160 aa11.13□□□□□ -0.63
SCN3B-206ENST00000530277 RAD51DO75771 328 aa11.13□□□□□ -0.63
SCN3B-206ENST00000530277 IL11P20809 199 aa11.13□□□□□ -0.63
SCN3B-206ENST00000530277 IL32P24001 234 aa11.13□□□□□ -0.63
SCN3B-206ENST00000530277 HRH1P35367 487 aa11.13□□□□□ -0.63
SCN3B-206ENST00000530277 PI4KAP42356 2102 aa11.13□□□□□ -0.63
SCN3B-206ENST00000530277 HTR5AP47898 357 aa11.13□□□□□ -0.63
SCN3B-206ENST00000530277 RSPO4Q2I0M5 234 aaPredicted RBP11.13□□□□□ -0.63
SCN3B-206ENST00000530277 EXOSC6Q5RKV6 272 aaKnown RBP11.13□□□□□ -0.63
SCN3B-206ENST00000530277 P4HA3Q7Z4N8 544 aa11.13□□□□□ -0.63
SCN3B-206ENST00000530277 CMIPQ8IY22 773 aa11.13□□□□□ -0.63
SCN3B-206ENST00000530277 MARCH1Q8TCQ1 289 aa11.13□□□□□ -0.63
SCN3B-206ENST00000530277 HLA-CQ95604 372 aa11.13□□□□□ -0.63
SCN3B-206ENST00000530277 MENTQ9BUN1 341 aa11.13□□□□□ -0.63
SCN3B-206ENST00000530277 KCNS2Q9ULS6 477 aa11.13□□□□□ -0.63
SCN3B-206ENST00000530277 MRPS10P82664 201 aaKnown RBP11.13□□□□□ -0.63
SCN3B-206ENST00000530277 EBPQ15125 230 aaKnown RBP11.13□□□□□ -0.63
SCN3B-206ENST00000530277 TCEAL6Q6IPX3 200 aa11.13□□□□□ -0.63
SCN3B-206ENST00000530277 PXKQ7Z7A4 578 aa11.13□□□□□ -0.63
SCN3B-206ENST00000530277 C20orf196Q8IYI0 205 aa11.13□□□□□ -0.63
SCN3B-206ENST00000530277 OR4D10Q8NGI6 311 aa11.13□□□□□ -0.63
SCN3B-206ENST00000530277 OR1J2Q8NGS2 313 aa11.13□□□□□ -0.63
SCN3B-206ENST00000530277 FOXRED1Q96CU9 486 aaPredicted RBP11.13□□□□□ -0.63
SCN3B-206ENST00000530277 SLC7A11Q9UPY5 501 aa11.13□□□□□ -0.63
SCN3B-206ENST00000530277 KCNIP3Q9Y2W7 256 aa11.13□□□□□ -0.63
SCN3B-206ENST00000530277 SF3B6Q9Y3B4 125 aaKnown RBP11.13□□□□□ -0.63
SCN3B-206ENST00000530277 MMACHCQ9Y4U1 282 aa11.13□□□□□ -0.63
SCN3B-206ENST00000530277 MPDZO75970 2070 aa11.13□□□□□ -0.63
SCN3B-206ENST00000530277 SHANK1Q9Y566 2161 aa11.13□□□□□ -0.63
SCN3B-206ENST00000530277 B8ZZF3 427 aa11.13□□□□□ -0.63
SCN3B-206ENST00000530277 H7C2Y5 167 aa11.13□□□□□ -0.63
SCN3B-206ENST00000530277 NME2P22392 152 aa11.13□□□□□ -0.63
SCN3B-206ENST00000530277 BDH1Q02338 343 aa11.13□□□□□ -0.63
SCN3B-206ENST00000530277 TAF9Q16594 264 aa11.13□□□□□ -0.63
SCN3B-206ENST00000530277 ADGRE4PQ86SQ3 457 aa11.13□□□□□ -0.63
SCN3B-206ENST00000530277 PNPLA2Q96AD5 504 aa11.13□□□□□ -0.63
SCN3B-206ENST00000530277 RSPO3Q9BXY4 272 aaPredicted RBP11.13□□□□□ -0.63
SCN3B-206ENST00000530277 GPR173Q9NS66 373 aa11.13□□□□□ -0.63
SCN3B-206ENST00000530277 ZNF230Q9UIE0 474 aaPredicted RBP11.13□□□□□ -0.63
SCN3B-206ENST00000530277 ZMIZ1Q9ULJ6 1067 aa11.13□□□□□ -0.63
SCN3B-206ENST00000530277 TMEM184BQ9Y519 407 aaPredicted RBP11.13□□□□□ -0.63
SCN3B-206ENST00000530277 PRUNE2Q8WUY3 3088 aa11.13□□□□□ -0.63
SCN3B-206ENST00000530277 PHF3Q92576 2039 aaKnown RBP11.13□□□□□ -0.63
SCN3B-206ENST00000530277 ARPC4-TTLL3A0A0A6YYG9 625 aa11.12□□□□□ -0.63
SCN3B-206ENST00000530277 IGHV1OR15-9A0A0B4J2B8 117 aa11.12□□□□□ -0.63
SCN3B-206ENST00000530277 TOR1AO14656 332 aa11.12□□□□□ -0.63
SCN3B-206ENST00000530277 PIAS2O75928 621 aa11.12□□□□□ -0.63
SCN3B-206ENST00000530277 RD3LP0DJH9 198 aa11.12□□□□□ -0.63
SCN3B-206ENST00000530277 TCN2P20062 427 aa11.12□□□□□ -0.63
SCN3B-206ENST00000530277 AGFG1P52594 562 aaKnown RBP11.12□□□□□ -0.63
SCN3B-206ENST00000530277 EPHA4P54764 986 aa11.12□□□□□ -0.63
SCN3B-206ENST00000530277 NR2C2APQ86WQ0 139 aa11.12□□□□□ -0.63
SCN3B-206ENST00000530277 ZNF100Q8IYN0 542 aa11.12□□□□□ -0.63
SCN3B-206ENST00000530277 OR6M1Q8NGM8 313 aa11.12□□□□□ -0.63
SCN3B-206ENST00000530277 OR52N5Q8NH56 324 aa11.12□□□□□ -0.63
SCN3B-206ENST00000530277 OTOSQ8NHW6 89 aa11.12□□□□□ -0.63
SCN3B-206ENST00000530277 C11orf40Q8WZ69 217 aa11.12□□□□□ -0.63
SCN3B-206ENST00000530277 ALKBH3Q96Q83 286 aaPredicted RBP11.12□□□□□ -0.63
SCN3B-206ENST00000530277 PRRT1Q99946 306 aa11.12□□□□□ -0.63
SCN3B-206ENST00000530277 PHF7Q9BWX1 381 aaPredicted RBP11.12□□□□□ -0.63
SCN3B-206ENST00000530277 EDARQ9UNE0 448 aa11.12□□□□□ -0.63
SCN3B-206ENST00000530277 UBE2J1Q9Y385 318 aaPredicted RBP11.12□□□□□ -0.63
SCN3B-206ENST00000530277 A0A096LPE4 126 aa11.12□□□□□ -0.63
SCN3B-206ENST00000530277 A0A1W2PPZ6 126 aa11.12□□□□□ -0.63
SCN3B-206ENST00000530277 EFEMP2O95967 443 aa11.12□□□□□ -0.63
SCN3B-206ENST00000530277 NME1P15531 152 aaKnown RBP11.12□□□□□ -0.63
SCN3B-206ENST00000530277 AGTR1P30556 359 aa11.12□□□□□ -0.63
SCN3B-206ENST00000530277 MC2RQ01718 297 aa11.12□□□□□ -0.63
SCN3B-206ENST00000530277 Q5BKY6 102 aa11.12□□□□□ -0.63
SCN3B-206ENST00000530277 TMUB2Q71RG4 321 aa11.12□□□□□ -0.63
SCN3B-206ENST00000530277 Q7L0L9 218 aa11.12□□□□□ -0.63
SCN3B-206ENST00000530277 TDHQ8IZJ6 230 aa11.12□□□□□ -0.63
SCN3B-206ENST00000530277 ST8SIA4Q92187 359 aa11.12□□□□□ -0.63
SCN3B-206ENST00000530277 TXNIPQ9H3M7 391 aa11.12□□□□□ -0.63
SCN3B-206ENST00000530277 IGHV1OR21-1A0A087WYE8 117 aa11.12□□□□□ -0.63
SCN3B-206ENST00000530277 C5orf67F2Z3F1 127 aa11.12□□□□□ -0.63
SCN3B-206ENST00000530277 H7C417 338 aa11.12□□□□□ -0.63
SCN3B-206ENST00000530277 FAHP16930 419 aa11.12□□□□□ -0.63
SCN3B-206ENST00000530277 CASRP41180 1078 aa11.12□□□□□ -0.63
SCN3B-206ENST00000530277 GPR3P46089 330 aa11.12□□□□□ -0.63
SCN3B-206ENST00000530277 MMP15P51511 669 aa11.12□□□□□ -0.63
SCN3B-206ENST00000530277 MFAP5Q13361 173 aa11.12□□□□□ -0.63
SCN3B-206ENST00000530277 GSG1Q2KHT4 349 aa11.12□□□□□ -0.63
SCN3B-206ENST00000530277 PWWP2BQ6NUJ5 590 aa11.12□□□□□ -0.63
SCN3B-206ENST00000530277 LRRTM1Q86UE6 522 aa11.12□□□□□ -0.63
SCN3B-206ENST00000530277 OR2AK2Q8NG84 335 aa11.12□□□□□ -0.63
SCN3B-206ENST00000530277 OR1J4Q8NGS1 313 aa11.12□□□□□ -0.63
SCN3B-206ENST00000530277 APOBEC4Q8WW27 367 aaKnown RBP11.12□□□□□ -0.63
SCN3B-206ENST00000530277 C4orf45Q96LM5 186 aa11.12□□□□□ -0.63
SCN3B-206ENST00000530277 CHST6Q9GZX3 395 aa11.12□□□□□ -0.63
SCN3B-206ENST00000530277 NXF2Q9GZY0 626 aaKnown RBP11.12□□□□□ -0.63
SCN3B-206ENST00000530277 LAT2Q9GZY6 243 aa11.12□□□□□ -0.63
SCN3B-206ENST00000530277 CALHM2Q9HA72 323 aa11.12□□□□□ -0.63
SCN3B-206ENST00000530277 TRAPPC2P0DI81 140 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms