RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 RAB39AQ14964 217 aa21.52■■□□□ 1.04
LDLRAD3-203ENST00000528989 TAF13Q15543 124 aa21.52■■□□□ 1.04
LDLRAD3-203ENST00000528989 MTFR2Q6P444 385 aa21.52■■□□□ 1.04
LDLRAD3-203ENST00000528989 MYPOPQ86VE0 399 aaPredicted RBP21.52■■□□□ 1.04
LDLRAD3-203ENST00000528989 HIST2H2ABQ8IUE6 130 aaPredicted RBP21.52■■□□□ 1.04
LDLRAD3-203ENST00000528989 DDX28Q9NUL7 540 aaKnown RBP21.52■■□□□ 1.04
LDLRAD3-203ENST00000528989 F5H5K5 113 aa21.52■■□□□ 1.03
LDLRAD3-203ENST00000528989 CELA3BP08861 270 aa21.52■■□□□ 1.03
LDLRAD3-203ENST00000528989 HOXC12P31275 282 aa21.52■■□□□ 1.03
LDLRAD3-203ENST00000528989 ARR3P36575 388 aa21.52■■□□□ 1.03
LDLRAD3-203ENST00000528989 ASCL1P50553 236 aa21.52■■□□□ 1.03
LDLRAD3-203ENST00000528989 PRKXP51817 358 aa21.52■■□□□ 1.03
LDLRAD3-203ENST00000528989 RAB35Q15286 201 aa21.52■■□□□ 1.03
LDLRAD3-203ENST00000528989 TIGD6Q17RP2 521 aa21.52■■□□□ 1.03
LDLRAD3-203ENST00000528989 KCTD20Q7Z5Y7 419 aa21.52■■□□□ 1.03
LDLRAD3-203ENST00000528989 OR1F12Q8NHA8 337 aa21.52■■□□□ 1.03
LDLRAD3-203ENST00000528989 PPP1R14AQ96A00 147 aa21.52■■□□□ 1.03
LDLRAD3-203ENST00000528989 COG8Q96MW5 612 aa21.52■■□□□ 1.03
LDLRAD3-203ENST00000528989 BRD7Q9NPI1 651 aa21.52■■□□□ 1.03
LDLRAD3-203ENST00000528989 FLNCQ14315 2725 aa21.51■■□□□ 1.03
LDLRAD3-203ENST00000528989 JUNBP17275 347 aaPredicted RBP21.51■■□□□ 1.03
LDLRAD3-203ENST00000528989 HTR5AP47898 357 aa21.51■■□□□ 1.03
LDLRAD3-203ENST00000528989 RIDAP52758 137 aaKnown RBP21.51■■□□□ 1.03
LDLRAD3-203ENST00000528989 NR1H2P55055 460 aa21.51■■□□□ 1.03
LDLRAD3-203ENST00000528989 NANOS3P60323 173 aaKnown RBP21.51■■□□□ 1.03
LDLRAD3-203ENST00000528989 ARMCX4Q5H9R4 360 aa21.51■■□□□ 1.03
LDLRAD3-203ENST00000528989 ZNF367Q7RTV3 350 aa21.51■■□□□ 1.03
LDLRAD3-203ENST00000528989 C17orf78Q8N4C9 275 aa21.51■■□□□ 1.03
LDLRAD3-203ENST00000528989 ITLN2Q8WWU7 325 aaPredicted RBP21.51■■□□□ 1.03
LDLRAD3-203ENST00000528989 NANOS1Q8WY41 292 aaKnown RBP21.51■■□□□ 1.03
LDLRAD3-203ENST00000528989 OPALINQ96PE5 141 aa21.51■■□□□ 1.03
LDLRAD3-203ENST00000528989 VCX3AQ9NNX9 186 aa21.51■■□□□ 1.03
LDLRAD3-203ENST00000528989 SLC25A15Q9Y619 301 aa21.51■■□□□ 1.03
LDLRAD3-203ENST00000528989 LOC100509620A0A075B734 347 aa21.5■■□□□ 1.03
LDLRAD3-203ENST00000528989 ARPC4-TTLL3A0A0A6YYG9 625 aa21.5■■□□□ 1.03
LDLRAD3-203ENST00000528989 OR6C6A6NF89 314 aa21.5■■□□□ 1.03
LDLRAD3-203ENST00000528989 TACSTD2P09758 323 aa21.5■■□□□ 1.03
LDLRAD3-203ENST00000528989 SLC2A1P11166 492 aa21.5■■□□□ 1.03
LDLRAD3-203ENST00000528989 MFGE8Q08431 387 aaPredicted RBP21.5■■□□□ 1.03
LDLRAD3-203ENST00000528989 TAB1Q15750 504 aa21.5■■□□□ 1.03
LDLRAD3-203ENST00000528989 SYT6Q5T7P8 510 aaPredicted RBP21.5■■□□□ 1.03
LDLRAD3-203ENST00000528989 DEGS2Q6QHC5 323 aa21.5■■□□□ 1.03
LDLRAD3-203ENST00000528989 RHOUQ7L0Q8 258 aa21.5■■□□□ 1.03
LDLRAD3-203ENST00000528989 FAM220AQ7Z4H9 259 aa21.5■■□□□ 1.03
LDLRAD3-203ENST00000528989 ALDH16A1Q8IZ83 802 aa21.5■■□□□ 1.03
LDLRAD3-203ENST00000528989 FCGR1BQ92637 280 aa21.5■■□□□ 1.03
LDLRAD3-203ENST00000528989 MRPL48Q96GC5 212 aaKnown RBP21.5■■□□□ 1.03
LDLRAD3-203ENST00000528989 WACQ9BTA9 647 aa21.5■■□□□ 1.03
LDLRAD3-203ENST00000528989 HOXB1P14653 301 aaPredicted RBP21.49■■□□□ 1.03
LDLRAD3-203ENST00000528989 HSD11B1P28845 292 aa21.49■■□□□ 1.03
LDLRAD3-203ENST00000528989 LIPAP38571 399 aa21.49■■□□□ 1.03
LDLRAD3-203ENST00000528989 ALDH3B2P48448 385 aa21.49■■□□□ 1.03
LDLRAD3-203ENST00000528989 BLMHQ13867 455 aa21.49■■□□□ 1.03
LDLRAD3-203ENST00000528989 TIMM23BQ5SRD1 257 aa21.49■■□□□ 1.03
LDLRAD3-203ENST00000528989 TMEM53Q6P2H8 277 aa21.49■■□□□ 1.03
LDLRAD3-203ENST00000528989 CCDC36Q8IYA8 594 aa21.49■■□□□ 1.03
LDLRAD3-203ENST00000528989 STEAP2Q8NFT2 490 aa21.49■■□□□ 1.03
LDLRAD3-203ENST00000528989 HDHD2Q9H0R4 259 aa21.49■■□□□ 1.03
LDLRAD3-203ENST00000528989 N6AMT1Q9Y5N5 214 aa21.49■■□□□ 1.03
LDLRAD3-203ENST00000528989 ZNF254O75437 659 aa21.49■■□□□ 1.03
LDLRAD3-203ENST00000528989 CRYGSP22914 178 aa21.49■■□□□ 1.03
LDLRAD3-203ENST00000528989 RPL5P46777 297 aaKnown RBP21.49■■□□□ 1.03
LDLRAD3-203ENST00000528989 HGFACQ04756 655 aa21.49■■□□□ 1.03
LDLRAD3-203ENST00000528989 KCNJ16Q9NPI9 418 aa21.49■■□□□ 1.03
LDLRAD3-203ENST00000528989 TMEM269A0A1B0GVZ9 245 aa21.48■■□□□ 1.03
LDLRAD3-203ENST00000528989 SRSF10O75494 262 aaKnown RBP21.48■■□□□ 1.03
LDLRAD3-203ENST00000528989 CELP19835 753 aa21.48■■□□□ 1.03
LDLRAD3-203ENST00000528989 CCNOP22674 350 aa21.48■■□□□ 1.03
LDLRAD3-203ENST00000528989 STOMP27105 288 aa21.48■■□□□ 1.03
LDLRAD3-203ENST00000528989 IDH3GP51553 393 aaPredicted RBP21.48■■□□□ 1.03
LDLRAD3-203ENST00000528989 GBX2P52951 348 aaPredicted RBP21.48■■□□□ 1.03
LDLRAD3-203ENST00000528989 LIPKQ5VXJ0 399 aa21.48■■□□□ 1.03
LDLRAD3-203ENST00000528989 SATL1Q86VE3 508 aa21.48■■□□□ 1.03
LDLRAD3-203ENST00000528989 KCNJ15Q99712 375 aa21.48■■□□□ 1.03
LDLRAD3-203ENST00000528989 TRIM36Q9NQ86 728 aa21.48■■□□□ 1.03
LDLRAD3-203ENST00000528989 FRRS1LQ9P0K9 344 aa21.48■■□□□ 1.03
LDLRAD3-203ENST00000528989 MYO18BQ8IUG5 2567 aa21.47■■□□□ 1.03
LDLRAD3-203ENST00000528989 C5orf63A6NC05 138 aa21.47■■□□□ 1.03
LDLRAD3-203ENST00000528989 ZNF14P17017 642 aaPredicted RBP21.47■■□□□ 1.03
LDLRAD3-203ENST00000528989 TSTQ16762 297 aaKnown RBP21.47■■□□□ 1.03
LDLRAD3-203ENST00000528989 FBXL19-AS1Q494R0 122 aa21.47■■□□□ 1.03
LDLRAD3-203ENST00000528989 DPPA2Q7Z7J5 298 aa21.47■■□□□ 1.03
LDLRAD3-203ENST00000528989 PRSS35Q8N3Z0 413 aa21.47■■□□□ 1.03
LDLRAD3-203ENST00000528989 ZC3HAV1LQ96H79 300 aaKnown RBP21.47■■□□□ 1.03
LDLRAD3-203ENST00000528989 ST6GALNAC2Q9UJ37 374 aa21.47■■□□□ 1.03
LDLRAD3-203ENST00000528989 GTF2A1LQ9UNN4 478 aa21.47■■□□□ 1.03
LDLRAD3-203ENST00000528989 SLC22A13Q9Y226 551 aa21.47■■□□□ 1.03
LDLRAD3-203ENST00000528989 SERPINA5P05154 406 aa21.47■■□□□ 1.03
LDLRAD3-203ENST00000528989 OTX1P32242 354 aaPredicted RBP21.47■■□□□ 1.03
LDLRAD3-203ENST00000528989 CX3CR1P49238 355 aa21.47■■□□□ 1.03
LDLRAD3-203ENST00000528989 GRB2P62993 217 aaKnown RBP21.47■■□□□ 1.03
LDLRAD3-203ENST00000528989 PLP2Q04941 152 aa21.47■■□□□ 1.03
LDLRAD3-203ENST00000528989 TFF3Q07654 80 aa21.47■■□□□ 1.03
LDLRAD3-203ENST00000528989 ACSM1Q08AH1 577 aa21.47■■□□□ 1.03
LDLRAD3-203ENST00000528989 MLLT11Q13015 90 aaPredicted RBP21.47■■□□□ 1.03
LDLRAD3-203ENST00000528989 SSX1Q16384 188 aa21.47■■□□□ 1.03
LDLRAD3-203ENST00000528989 ODF4Q2M2E3 257 aa21.47■■□□□ 1.03
LDLRAD3-203ENST00000528989 PAQR4Q8N4S7 273 aaPredicted RBP21.47■■□□□ 1.03
LDLRAD3-203ENST00000528989 MYCBPQ99417 103 aaPredicted RBP21.47■■□□□ 1.03
LDLRAD3-203ENST00000528989 COQ7Q99807 217 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms