RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 EVX1P49640 407 aa7.23□□□□□ -1.25
SSBP3-212ENST00000528930 SMIM11AP58511 58 aa7.23□□□□□ -1.25
SSBP3-212ENST00000528930 RAP1BP61224 184 aa7.23□□□□□ -1.25
SSBP3-212ENST00000528930 RAP1AP62834 184 aa7.23□□□□□ -1.25
SSBP3-212ENST00000528930 PSG4Q00888 419 aa7.23□□□□□ -1.25
SSBP3-212ENST00000528930 SPIBQ01892 262 aa7.23□□□□□ -1.25
SSBP3-212ENST00000528930 RFX4Q33E94 735 aa7.23□□□□□ -1.25
SSBP3-212ENST00000528930 MTX3Q5HYI7 312 aa7.23□□□□□ -1.25
SSBP3-212ENST00000528930 PABPC1L2AQ5JQF8 200 aa7.23□□□□□ -1.25
SSBP3-212ENST00000528930 C1orf94Q6P1W5 598 aa7.23□□□□□ -1.25
SSBP3-212ENST00000528930 DPY19L2P2Q6ZN68 376 aa7.23□□□□□ -1.25
SSBP3-212ENST00000528930 LRP11Q86VZ4 500 aa7.23□□□□□ -1.25
SSBP3-212ENST00000528930 ZDHHC21Q8IVQ6 265 aa7.23□□□□□ -1.25
SSBP3-212ENST00000528930 ZCCHC24Q8N2G6 241 aaKnown RBP7.23□□□□□ -1.25
SSBP3-212ENST00000528930 SLC30A7Q8NEW0 376 aa7.23□□□□□ -1.25
SSBP3-212ENST00000528930 C10orf105Q8TEF2 133 aa7.23□□□□□ -1.25
SSBP3-212ENST00000528930 RASD2Q96D21 266 aa7.23□□□□□ -1.25
SSBP3-212ENST00000528930 CLPTM1LQ96KA5 538 aa7.23□□□□□ -1.25
SSBP3-212ENST00000528930 MUC13Q9H3R2 512 aa7.23□□□□□ -1.25
SSBP3-212ENST00000528930 VSX1Q9NZR4 365 aaPredicted RBP7.23□□□□□ -1.25
SSBP3-212ENST00000528930 GRHPRQ9UBQ7 328 aa7.23□□□□□ -1.25
SSBP3-212ENST00000528930 SLC7A8Q9UHI5 535 aa7.23□□□□□ -1.25
SSBP3-212ENST00000528930 PRPF19Q9UMS4 504 aaKnown RBP7.23□□□□□ -1.25
SSBP3-212ENST00000528930 CMAHPQ9Y471 501 aa7.23□□□□□ -1.25
SSBP3-212ENST00000528930 SPEF1Q9Y4P9 236 aa7.23□□□□□ -1.25
SSBP3-212ENST00000528930 IER3IP1Q9Y5U9 82 aa7.23□□□□□ -1.25
SSBP3-212ENST00000528930 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.23□□□□□ -1.25
SSBP3-212ENST00000528930 RYR1P21817 5038 aa7.23□□□□□ -1.25
SSBP3-212ENST00000528930 LOC100509620A0A075B734 347 aa7.22□□□□□ -1.25
SSBP3-212ENST00000528930 IQCMA0A1B0GVH7 501 aa7.22□□□□□ -1.25
SSBP3-212ENST00000528930 VWC2LB2RUY7 222 aa7.22□□□□□ -1.25
SSBP3-212ENST00000528930 ACOT8O14734 319 aa7.22□□□□□ -1.25
SSBP3-212ENST00000528930 OR10H3O60404 316 aa7.22□□□□□ -1.25
SSBP3-212ENST00000528930 CLPTM1O96005 669 aa7.22□□□□□ -1.25
SSBP3-212ENST00000528930 PTHP01270 115 aa7.22□□□□□ -1.25
SSBP3-212ENST00000528930 HKR1P10072 659 aa7.22□□□□□ -1.25
SSBP3-212ENST00000528930 CTLA4P16410 223 aa7.22□□□□□ -1.25
SSBP3-212ENST00000528930 FPR3P25089 353 aa7.22□□□□□ -1.25
SSBP3-212ENST00000528930 APEX1P27695 318 aaKnown RBP7.22□□□□□ -1.25
SSBP3-212ENST00000528930 CDKN2AP42771 156 aaKnown RBP7.22□□□□□ -1.25
SSBP3-212ENST00000528930 GSSP48637 474 aa7.22□□□□□ -1.25
SSBP3-212ENST00000528930 GALK2Q01415 458 aa7.22□□□□□ -1.25
SSBP3-212ENST00000528930 PLP2Q04941 152 aa7.22□□□□□ -1.25
SSBP3-212ENST00000528930 CBX3Q13185 183 aa7.22□□□□□ -1.25
SSBP3-212ENST00000528930 KRR1Q13601 381 aaKnown RBP7.22□□□□□ -1.25
SSBP3-212ENST00000528930 APOFQ13790 326 aa7.22□□□□□ -1.25
SSBP3-212ENST00000528930 ENDOGQ14249 297 aaKnown RBP7.22□□□□□ -1.25
SSBP3-212ENST00000528930 CCDC92Q53HC0 331 aaPredicted RBP7.22□□□□□ -1.25
SSBP3-212ENST00000528930 GPR139Q6DWJ6 353 aa7.22□□□□□ -1.25
SSBP3-212ENST00000528930 ZNF770Q6IQ21 691 aaPredicted RBP7.22□□□□□ -1.25
SSBP3-212ENST00000528930 PGBD2Q6P3X8 592 aa7.22□□□□□ -1.25
SSBP3-212ENST00000528930 SMARCD3Q6STE5 483 aa7.22□□□□□ -1.25
SSBP3-212ENST00000528930 PTCHD4Q6ZW05 846 aa7.22□□□□□ -1.25
SSBP3-212ENST00000528930 DHFR2Q86XF0 187 aa7.22□□□□□ -1.25
SSBP3-212ENST00000528930 C1QL4Q86Z23 238 aa7.22□□□□□ -1.25
SSBP3-212ENST00000528930 ICA1LQ8NDH6 482 aa7.22□□□□□ -1.25
SSBP3-212ENST00000528930 OR4C15Q8NGM1 316 aa7.22□□□□□ -1.25
SSBP3-212ENST00000528930 AKR7LQ8NHP1 331 aa7.22□□□□□ -1.25
SSBP3-212ENST00000528930 ZNF418Q8TF45 676 aaPredicted RBP7.22□□□□□ -1.25
SSBP3-212ENST00000528930 FAM168AQ92567 244 aa7.22□□□□□ -1.25
SSBP3-212ENST00000528930 POM121L2Q96KW2 1035 aa7.22□□□□□ -1.25
SSBP3-212ENST00000528930 VRK1Q99986 396 aaPredicted RBP7.22□□□□□ -1.25
SSBP3-212ENST00000528930 ZNF416Q9BWM5 594 aa7.22□□□□□ -1.25
SSBP3-212ENST00000528930 OR2H1Q9GZK4 316 aa7.22□□□□□ -1.25
SSBP3-212ENST00000528930 WNT5BQ9H1J7 359 aa7.22□□□□□ -1.25
SSBP3-212ENST00000528930 SYT4Q9H2B2 425 aa7.22□□□□□ -1.25
SSBP3-212ENST00000528930 KCNN2Q9H2S1 579 aa7.22□□□□□ -1.25
SSBP3-212ENST00000528930 MMP27Q9H306 513 aa7.22□□□□□ -1.25
SSBP3-212ENST00000528930 OR52D1Q9H346 318 aa7.22□□□□□ -1.25
SSBP3-212ENST00000528930 C1orf198Q9H425 327 aa7.22□□□□□ -1.25
SSBP3-212ENST00000528930 MAGIXQ9H6Y5 334 aa7.22□□□□□ -1.25
SSBP3-212ENST00000528930 KRCC1Q9NPI7 259 aaPredicted RBP7.22□□□□□ -1.25
SSBP3-212ENST00000528930 POLE4Q9NR33 117 aa7.22□□□□□ -1.25
SSBP3-212ENST00000528930 MYEF2Q9P2K5 600 aaKnown RBP7.22□□□□□ -1.25
SSBP3-212ENST00000528930 FBXO9Q9UK97 447 aaPredicted RBP7.22□□□□□ -1.25
SSBP3-212ENST00000528930 FZR1Q9UM11 496 aa7.22□□□□□ -1.25
SSBP3-212ENST00000528930 LYVE1Q9Y5Y7 322 aa7.22□□□□□ -1.25
SSBP3-212ENST00000528930 TENM2Q9NT68 2774 aa7.22□□□□□ -1.25
SSBP3-212ENST00000528930 IGLV3-9A0A075B6K5 115 aa7.21□□□□□ -1.26
SSBP3-212ENST00000528930 A0A1W2PPL8 197 aa7.21□□□□□ -1.26
SSBP3-212ENST00000528930 TRIM64CA6NLI5 447 aa7.21□□□□□ -1.26
SSBP3-212ENST00000528930 TNFRSF11BO00300 401 aa7.21□□□□□ -1.26
SSBP3-212ENST00000528930 DCTN6O00399 190 aa7.21□□□□□ -1.26
SSBP3-212ENST00000528930 SOCS2O14508 198 aa7.21□□□□□ -1.26
SSBP3-212ENST00000528930 XKRYO14609 159 aa7.21□□□□□ -1.26
SSBP3-212ENST00000528930 ARPC3O15145 178 aa7.21□□□□□ -1.26
SSBP3-212ENST00000528930 SYNGR3O43761 229 aa7.21□□□□□ -1.26
SSBP3-212ENST00000528930 ATP6V1G1O75348 118 aa7.21□□□□□ -1.26
SSBP3-212ENST00000528930 PPP1R3DO95685 299 aa7.21□□□□□ -1.26
SSBP3-212ENST00000528930 TGFAP01135 160 aa7.21□□□□□ -1.26
SSBP3-212ENST00000528930 GASTP01350 101 aa7.21□□□□□ -1.26
SSBP3-212ENST00000528930 ADRA2AP08913 450 aa7.21□□□□□ -1.26
SSBP3-212ENST00000528930 SMIM18P0DKX4 95 aa7.21□□□□□ -1.26
SSBP3-212ENST00000528930 APEHP13798 732 aaKnown RBP7.21□□□□□ -1.26
SSBP3-212ENST00000528930 ZNF250P15622 560 aa7.21□□□□□ -1.26
SSBP3-212ENST00000528930 RAB6AP20340 208 aa7.21□□□□□ -1.26
SSBP3-212ENST00000528930 MSR1P21757 451 aa7.21□□□□□ -1.26
SSBP3-212ENST00000528930 STOMP27105 288 aa7.21□□□□□ -1.26
SSBP3-212ENST00000528930 WNT5AP41221 380 aa7.21□□□□□ -1.26
SSBP3-212ENST00000528930 ALDH3B2P48448 385 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms