RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 KCNJ8Q15842 424 aa10.46□□□□□ -0.73
USF1-208ENST00000528768 RAB11BQ15907 218 aa10.46□□□□□ -0.73
USF1-208ENST00000528768 ZNF239Q16600 458 aaKnown RBP10.46□□□□□ -0.73
USF1-208ENST00000528768 NDUFA5Q16718 116 aa10.46□□□□□ -0.73
USF1-208ENST00000528768 PCK2Q16822 640 aa10.46□□□□□ -0.73
USF1-208ENST00000528768 PRR30Q53SZ7 412 aaPredicted RBP10.46□□□□□ -0.73
USF1-208ENST00000528768 TMEM69Q5SWH9 247 aa10.46□□□□□ -0.73
USF1-208ENST00000528768 SP5Q6BEB4 398 aaPredicted RBP10.46□□□□□ -0.73
USF1-208ENST00000528768 FAM198BQ6UWH4 519 aa10.46□□□□□ -0.73
USF1-208ENST00000528768 LRRTM1Q86UE6 522 aa10.46□□□□□ -0.73
USF1-208ENST00000528768 RPS19BP1Q86WX3 136 aaKnown RBP10.46□□□□□ -0.73
USF1-208ENST00000528768 LSRQ86X29 649 aaPredicted RBP10.46□□□□□ -0.73
USF1-208ENST00000528768 CATSPERDQ86XM0 798 aa10.46□□□□□ -0.73
USF1-208ENST00000528768 SLC26A10Q8NG04 563 aa10.46□□□□□ -0.73
USF1-208ENST00000528768 OR2AJ1Q8NGZ0 328 aa10.46□□□□□ -0.73
USF1-208ENST00000528768 SYNPRQ8TBG9 265 aa10.46□□□□□ -0.73
USF1-208ENST00000528768 CT55Q8WUE5 264 aa10.46□□□□□ -0.73
USF1-208ENST00000528768 HSD17B8Q92506 261 aa10.46□□□□□ -0.73
USF1-208ENST00000528768 AKAP1Q92667 903 aaKnown RBP eCLIP10.46□□□□□ -0.73
USF1-208ENST00000528768 YIPF5Q969M3 257 aa10.46□□□□□ -0.73
USF1-208ENST00000528768 MCHR2Q969V1 340 aa10.46□□□□□ -0.73
USF1-208ENST00000528768 FOXRED1Q96CU9 486 aaPredicted RBP10.46□□□□□ -0.73
USF1-208ENST00000528768 HAVCR1Q96D42 359 aa10.46□□□□□ -0.73
USF1-208ENST00000528768 SNRNP40Q96DI7 357 aaKnown RBP10.46□□□□□ -0.73
USF1-208ENST00000528768 ZNF486Q96H40 463 aaPredicted RBP10.46□□□□□ -0.73
USF1-208ENST00000528768 ARL5BQ96KC2 179 aa10.46□□□□□ -0.73
USF1-208ENST00000528768 SGCZQ96LD1 299 aa10.46□□□□□ -0.73
USF1-208ENST00000528768 OR5B2Q96R09 309 aa10.46□□□□□ -0.73
USF1-208ENST00000528768 ANGPTL4Q9BY76 406 aa10.46□□□□□ -0.73
USF1-208ENST00000528768 NIPAL2Q9H841 368 aa10.46□□□□□ -0.73
USF1-208ENST00000528768 SLC17A5Q9NRA2 495 aa10.46□□□□□ -0.73
USF1-208ENST00000528768 MRPL22Q9NWU5 206 aaKnown RBP10.46□□□□□ -0.73
USF1-208ENST00000528768 HPF1Q9NWY4 346 aa10.46□□□□□ -0.73
USF1-208ENST00000528768 EMC3Q9P0I2 261 aa10.46□□□□□ -0.73
USF1-208ENST00000528768 ALG5Q9Y673 324 aa10.46□□□□□ -0.73
USF1-208ENST00000528768 SEC16AO15027 2179 aa10.46□□□□□ -0.74
USF1-208ENST00000528768 ABCA2Q9BZC7 2435 aa10.46□□□□□ -0.74
USF1-208ENST00000528768 A0A1W2PQ72 361 aa10.45□□□□□ -0.74
USF1-208ENST00000528768 ARGFXA6NJG6 315 aa10.45□□□□□ -0.74
USF1-208ENST00000528768 ACOT7O00154 380 aa10.45□□□□□ -0.74
USF1-208ENST00000528768 VAMP5O95183 116 aa10.45□□□□□ -0.74
USF1-208ENST00000528768 MAS1P04201 325 aa10.45□□□□□ -0.74
USF1-208ENST00000528768 ISG15P05161 165 aa10.45□□□□□ -0.74
USF1-208ENST00000528768 FAM157BP0CG42 384 aa10.45□□□□□ -0.74
USF1-208ENST00000528768 COX6A1P12074 109 aa10.45□□□□□ -0.74
USF1-208ENST00000528768 ZNF43P17038 809 aa10.45□□□□□ -0.74
USF1-208ENST00000528768 KIR3DL2P43630 455 aa10.45□□□□□ -0.74
USF1-208ENST00000528768 RRADP55042 308 aa10.45□□□□□ -0.74
USF1-208ENST00000528768 DSCR4P56555 118 aaPredicted RBP10.45□□□□□ -0.74
USF1-208ENST00000528768 CSNK2A1P68400 391 aaPredicted RBP10.45□□□□□ -0.74
USF1-208ENST00000528768 BCL2L15Q5TBC7 163 aa10.45□□□□□ -0.74
USF1-208ENST00000528768 OR7E24Q6IFN5 339 aa10.45□□□□□ -0.74
USF1-208ENST00000528768 FAM199XQ6PEV8 388 aaPredicted RBP10.45□□□□□ -0.74
USF1-208ENST00000528768 DCXRQ7Z4W1 244 aa10.45□□□□□ -0.74
USF1-208ENST00000528768 SYT9Q86SS6 491 aa10.45□□□□□ -0.74
USF1-208ENST00000528768 TCTE3Q8IZS6 198 aa10.45□□□□□ -0.74
USF1-208ENST00000528768 PRSS35Q8N3Z0 413 aa10.45□□□□□ -0.74
USF1-208ENST00000528768 GTPBP8Q8N3Z3 284 aaPredicted RBP10.45□□□□□ -0.74
USF1-208ENST00000528768 NOXO1Q8NFA2 376 aa10.45□□□□□ -0.74
USF1-208ENST00000528768 OR1J4Q8NGS1 313 aa10.45□□□□□ -0.74
USF1-208ENST00000528768 OR6X1Q8NH79 312 aa10.45□□□□□ -0.74
USF1-208ENST00000528768 POC1BQ8TC44 478 aa10.45□□□□□ -0.74
USF1-208ENST00000528768 RNF166Q96A37 237 aaPredicted RBP10.45□□□□□ -0.74
USF1-208ENST00000528768 SLC25A44Q96H78 314 aaPredicted RBP10.45□□□□□ -0.74
USF1-208ENST00000528768 CACNG6Q9BXT2 260 aa10.45□□□□□ -0.74
USF1-208ENST00000528768 C1orf198Q9H425 327 aa10.45□□□□□ -0.74
USF1-208ENST00000528768 CDCP1Q9H5V8 836 aa10.45□□□□□ -0.74
USF1-208ENST00000528768 MOB1AQ9H8S9 216 aa10.45□□□□□ -0.74
USF1-208ENST00000528768 TAS2R8Q9NYW2 309 aa10.45□□□□□ -0.74
USF1-208ENST00000528768 KLHL13Q9P2N7 655 aa10.45□□□□□ -0.74
USF1-208ENST00000528768 OR5V1Q9UGF6 321 aa10.45□□□□□ -0.74
USF1-208ENST00000528768 NUFIP1Q9UHK0 495 aaKnown RBP10.45□□□□□ -0.74
USF1-208ENST00000528768 DKKL1Q9UK85 242 aa10.45□□□□□ -0.74
USF1-208ENST00000528768 POLR1DQ9Y2S0 133 aa10.45□□□□□ -0.74
USF1-208ENST00000528768 LRP12Q9Y561 859 aa10.45□□□□□ -0.74
USF1-208ENST00000528768 TNRC6AQ8NDV7 1962 aaKnown RBP10.45□□□□□ -0.74
USF1-208ENST00000528768 A0A1B0GVC2 190 aa10.44□□□□□ -0.74
USF1-208ENST00000528768 FAM172BPA6NC97 362 aa10.44□□□□□ -0.74
USF1-208ENST00000528768 A6NIN4 97 aa10.44□□□□□ -0.74
USF1-208ENST00000528768 SULT2B1O00204 365 aa10.44□□□□□ -0.74
USF1-208ENST00000528768 PMS2P2O95744 297 aa10.44□□□□□ -0.74
USF1-208ENST00000528768 GPANK1O95872 356 aa10.44□□□□□ -0.74
USF1-208ENST00000528768 UMODP07911 640 aa10.44□□□□□ -0.74
USF1-208ENST00000528768 CD3GP09693 182 aa10.44□□□□□ -0.74
USF1-208ENST00000528768 HLA-DOBP13765 273 aa10.44□□□□□ -0.74
USF1-208ENST00000528768 ARSBP15848 533 aa10.44□□□□□ -0.74
USF1-208ENST00000528768 ZNF17P17021 662 aa10.44□□□□□ -0.74
USF1-208ENST00000528768 FSTP19883 344 aa10.44□□□□□ -0.74
USF1-208ENST00000528768 IL11P20809 199 aa10.44□□□□□ -0.74
USF1-208ENST00000528768 MLF1P58340 268 aa10.44□□□□□ -0.74
USF1-208ENST00000528768 RRAS2P62070 204 aaPredicted RBP10.44□□□□□ -0.74
USF1-208ENST00000528768 MAB21L1Q13394 359 aa10.44□□□□□ -0.74
USF1-208ENST00000528768 TAF13Q15543 124 aa10.44□□□□□ -0.74
USF1-208ENST00000528768 TMEM176BQ3YBM2 270 aaPredicted RBP10.44□□□□□ -0.74
USF1-208ENST00000528768 PLA1AQ53H76 456 aa10.44□□□□□ -0.74
USF1-208ENST00000528768 RHOUQ7L0Q8 258 aa10.44□□□□□ -0.74
USF1-208ENST00000528768 LUZP2Q86TE4 346 aa10.44□□□□□ -0.74
USF1-208ENST00000528768 SIAH3Q8IW03 269 aa10.44□□□□□ -0.74
USF1-208ENST00000528768 KDM8Q8N371 416 aa10.44□□□□□ -0.74
USF1-208ENST00000528768 RBMXL3Q8N7X1 1067 aaKnown RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms