RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 LIPAP38571 399 aa13.21□□□□□ -0.29
CAPN1-213ENST00000527897 CRYBB2P43320 205 aa13.21□□□□□ -0.29
CAPN1-213ENST00000527897 CDH15P55291 814 aa13.21□□□□□ -0.29
CAPN1-213ENST00000527897 MICAQ29983 383 aa13.21□□□□□ -0.29
CAPN1-213ENST00000527897 CR1LQ2VPA4 569 aa13.21□□□□□ -0.29
CAPN1-213ENST00000527897 SLC36A3Q495N2 470 aa13.21□□□□□ -0.29
CAPN1-213ENST00000527897 ZMAT1Q5H9K5 638 aa13.21□□□□□ -0.29
CAPN1-213ENST00000527897 FAM209AQ5JX71 171 aa13.21□□□□□ -0.29
CAPN1-213ENST00000527897 CFAP77Q6ZQR2 320 aa13.21□□□□□ -0.29
CAPN1-213ENST00000527897 RASSF6Q6ZTQ3 369 aa13.21□□□□□ -0.29
CAPN1-213ENST00000527897 OR5AS1Q8N127 324 aa13.21□□□□□ -0.29
CAPN1-213ENST00000527897 SLC26A10Q8NG04 563 aa13.21□□□□□ -0.29
CAPN1-213ENST00000527897 OR2Z1Q8NG97 314 aa13.21□□□□□ -0.29
CAPN1-213ENST00000527897 OR2AJ1Q8NGZ0 328 aa13.21□□□□□ -0.29
CAPN1-213ENST00000527897 CMBLQ96DG6 245 aa13.21□□□□□ -0.29
CAPN1-213ENST00000527897 MDFIQ99750 246 aa13.21□□□□□ -0.29
CAPN1-213ENST00000527897 TSSK6Q9BXA6 273 aa13.21□□□□□ -0.29
CAPN1-213ENST00000527897 HDHD2Q9H0R4 259 aa13.21□□□□□ -0.29
CAPN1-213ENST00000527897 C1orf21Q9H246 121 aa13.21□□□□□ -0.29
CAPN1-213ENST00000527897 ARMC1Q9NVT9 282 aa13.21□□□□□ -0.29
CAPN1-213ENST00000527897 PURGQ9UJV8 347 aaKnown RBP13.21□□□□□ -0.29
CAPN1-213ENST00000527897 FBN1P35555 2871 aaKnown RBP13.21□□□□□ -0.3
CAPN1-213ENST00000527897 ISPDA4D126 451 aa13.2□□□□□ -0.3
CAPN1-213ENST00000527897 TVP23AA6NH52 213 aa13.2□□□□□ -0.3
CAPN1-213ENST00000527897 F5H5K5 113 aa13.2□□□□□ -0.3
CAPN1-213ENST00000527897 BHLHE40O14503 412 aa13.2□□□□□ -0.3
CAPN1-213ENST00000527897 GNGT2O14610 69 aa13.2□□□□□ -0.3
CAPN1-213ENST00000527897 ZNF823P16415 610 aa13.2□□□□□ -0.3
CAPN1-213ENST00000527897 ERFP50548 548 aa13.2□□□□□ -0.3
CAPN1-213ENST00000527897 TNFAIP6P98066 277 aaPredicted RBP13.2□□□□□ -0.3
CAPN1-213ENST00000527897 HNRNPA0Q13151 305 aaKnown RBP13.2□□□□□ -0.3
CAPN1-213ENST00000527897 HLXQ14774 488 aaPredicted RBP13.2□□□□□ -0.3
CAPN1-213ENST00000527897 ZNF770Q6IQ21 691 aaPredicted RBP13.2□□□□□ -0.3
CAPN1-213ENST00000527897 ZBTB46Q86UZ6 589 aa13.2□□□□□ -0.3
CAPN1-213ENST00000527897 SPATA24Q86W54 205 aa13.2□□□□□ -0.3
CAPN1-213ENST00000527897 OR10G2Q8NGC3 310 aa13.2□□□□□ -0.3
CAPN1-213ENST00000527897 OR51L1Q8NGJ5 315 aa13.2□□□□□ -0.3
CAPN1-213ENST00000527897 OR9Q1Q8NGQ5 310 aa13.2□□□□□ -0.3
CAPN1-213ENST00000527897 TIMD4Q96H15 378 aa13.2□□□□□ -0.3
CAPN1-213ENST00000527897 COQ7Q99807 217 aa13.2□□□□□ -0.3
CAPN1-213ENST00000527897 CHID1Q9BWS9 393 aa13.2□□□□□ -0.3
CAPN1-213ENST00000527897 WDR76Q9H967 626 aa13.2□□□□□ -0.3
CAPN1-213ENST00000527897 FAM53CQ9NYF3 392 aa13.2□□□□□ -0.3
CAPN1-213ENST00000527897 IL20Q9NYY1 176 aa13.2□□□□□ -0.3
CAPN1-213ENST00000527897 CGGBP1Q9UFW8 167 aaPredicted RBP13.2□□□□□ -0.3
CAPN1-213ENST00000527897 ZDHHC8Q9ULC8 765 aa13.2□□□□□ -0.3
CAPN1-213ENST00000527897 DHRS12A0PJE2 317 aa13.19□□□□□ -0.3
CAPN1-213ENST00000527897 B4DSR2 109 aa13.19□□□□□ -0.3
CAPN1-213ENST00000527897 FAM157AC9JC47 383 aa13.19□□□□□ -0.3
CAPN1-213ENST00000527897 ACOT8O14734 319 aa13.19□□□□□ -0.3
CAPN1-213ENST00000527897 TNFSF4P23510 183 aa13.19□□□□□ -0.3
CAPN1-213ENST00000527897 RPS27P42677 84 aaKnown RBP13.19□□□□□ -0.3
CAPN1-213ENST00000527897 RGS6P49758 472 aa13.19□□□□□ -0.3
CAPN1-213ENST00000527897 COX10Q12887 443 aa13.19□□□□□ -0.3
CAPN1-213ENST00000527897 TRAP1Q12931 704 aaKnown RBP13.19□□□□□ -0.3
CAPN1-213ENST00000527897 DNAL1Q4LDG9 190 aa13.19□□□□□ -0.3
CAPN1-213ENST00000527897 SPRNQ5BIV9 151 aa13.19□□□□□ -0.3
CAPN1-213ENST00000527897 SLC18B1Q6NT16 456 aa13.19□□□□□ -0.3
CAPN1-213ENST00000527897 LYPD4Q6UWN0 246 aa13.19□□□□□ -0.3
CAPN1-213ENST00000527897 ADGRG5Q8IZF4 528 aa13.19□□□□□ -0.3
CAPN1-213ENST00000527897 SLC37A3Q8NCC5 494 aa13.19□□□□□ -0.3
CAPN1-213ENST00000527897 OR5L1Q8NGL2 311 aa13.19□□□□□ -0.3
CAPN1-213ENST00000527897 OR2T4Q8NH00 348 aa13.19□□□□□ -0.3
CAPN1-213ENST00000527897 CANT1Q8WVQ1 401 aa13.19□□□□□ -0.3
CAPN1-213ENST00000527897 PTP4A1Q93096 173 aa13.19□□□□□ -0.3
CAPN1-213ENST00000527897 POP5Q969H6 163 aaKnown RBP13.19□□□□□ -0.3
CAPN1-213ENST00000527897 COG8Q96MW5 612 aa13.19□□□□□ -0.3
CAPN1-213ENST00000527897 DCLRE1CQ96SD1 692 aaKnown RBP13.19□□□□□ -0.3
CAPN1-213ENST00000527897 DIRC2Q96SL1 478 aa13.19□□□□□ -0.3
CAPN1-213ENST00000527897 ATPIF1Q9UII2 106 aa13.19□□□□□ -0.3
CAPN1-213ENST00000527897 TMEFF2Q9UIK5 374 aaPredicted RBP13.19□□□□□ -0.3
CAPN1-213ENST00000527897 WIPI2Q9Y4P8 454 aa13.19□□□□□ -0.3
CAPN1-213ENST00000527897 ATRQ13535 2644 aa13.18□□□□□ -0.3
CAPN1-213ENST00000527897 H3BN98 237 aa13.18□□□□□ -0.3
CAPN1-213ENST00000527897 GYPBP06028 91 aa13.18□□□□□ -0.3
CAPN1-213ENST00000527897 TUBG1P23258 451 aa13.18□□□□□ -0.3
CAPN1-213ENST00000527897 SRP14P37108 136 aaKnown RBP13.18□□□□□ -0.3
CAPN1-213ENST00000527897 RBMXP38159 391 aaKnown RBP13.18□□□□□ -0.3
CAPN1-213ENST00000527897 HIST1H3AP68431 136 aa13.18□□□□□ -0.3
CAPN1-213ENST00000527897 CRMP1Q14194 572 aa13.18□□□□□ -0.3
CAPN1-213ENST00000527897 FLOT2Q14254 428 aa13.18□□□□□ -0.3
CAPN1-213ENST00000527897 HIST2H3PS2Q5TEC6 136 aa13.18□□□□□ -0.3
CAPN1-213ENST00000527897 OR2T2Q6IF00 324 aa13.18□□□□□ -0.3
CAPN1-213ENST00000527897 HIST2H3AQ71DI3 136 aa13.18□□□□□ -0.3
CAPN1-213ENST00000527897 GLCCI1Q86VQ1 547 aa13.18□□□□□ -0.3
CAPN1-213ENST00000527897 ATG16L2Q8NAA4 619 aa13.18□□□□□ -0.3
CAPN1-213ENST00000527897 BHLHE23Q8NDY6 225 aa13.18□□□□□ -0.3
CAPN1-213ENST00000527897 OR2T33Q8NG76 320 aa13.18□□□□□ -0.3
CAPN1-213ENST00000527897 OR4Q3Q8NH05 313 aa13.18□□□□□ -0.3
CAPN1-213ENST00000527897 TEX47Q8TBZ9 253 aa13.18□□□□□ -0.3
CAPN1-213ENST00000527897 GIPC3Q8TF64 312 aa13.18□□□□□ -0.3
CAPN1-213ENST00000527897 RAB1CQ92928 201 aa13.18□□□□□ -0.3
CAPN1-213ENST00000527897 APOBEC3DQ96AK3 386 aaPredicted RBP13.18□□□□□ -0.3
CAPN1-213ENST00000527897 OTULINQ96BN8 352 aa13.18□□□□□ -0.3
CAPN1-213ENST00000527897 HAVCR1Q96D42 359 aa13.18□□□□□ -0.3
CAPN1-213ENST00000527897 ATF6BQ99941 703 aa13.18□□□□□ -0.3
CAPN1-213ENST00000527897 NIPSNAP1Q9BPW8 284 aa13.18□□□□□ -0.3
CAPN1-213ENST00000527897 DGCR6LQ9BY27 220 aa13.18□□□□□ -0.3
CAPN1-213ENST00000527897 ZNF665Q9H7R5 613 aa13.18□□□□□ -0.3
CAPN1-213ENST00000527897 TUBG2Q9NRH3 451 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms