RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 PLBD1Q6P4A8 553 aa9.38□□□□□ -0.91
NEDD8-204ENST00000526430 B3GLCTQ6Y288 498 aa9.38□□□□□ -0.91
NEDD8-204ENST00000526430 HIST2H3AQ71DI3 136 aa9.38□□□□□ -0.91
NEDD8-204ENST00000526430 FAM169BQ8N8A8 192 aa9.38□□□□□ -0.91
NEDD8-204ENST00000526430 TCEANCQ8N8B7 351 aa9.38□□□□□ -0.91
NEDD8-204ENST00000526430 LINC01356Q8N9X3 169 aa9.38□□□□□ -0.91
NEDD8-204ENST00000526430 ZNF511Q8NB15 262 aa9.38□□□□□ -0.91
NEDD8-204ENST00000526430 CPEB3Q8NE35 698 aaKnown RBP9.38□□□□□ -0.91
NEDD8-204ENST00000526430 C11orf40Q8WZ69 217 aa9.38□□□□□ -0.91
NEDD8-204ENST00000526430 ZNF416Q9BWM5 594 aa9.38□□□□□ -0.91
NEDD8-204ENST00000526430 NDEL1Q9GZM8 345 aa9.38□□□□□ -0.91
NEDD8-204ENST00000526430 MARCH7Q9H992 704 aa9.38□□□□□ -0.91
NEDD8-204ENST00000526430 EMC7Q9NPA0 242 aa9.38□□□□□ -0.91
NEDD8-204ENST00000526430 PCDHB10Q9UN67 800 aa9.38□□□□□ -0.91
NEDD8-204ENST00000526430 PMF1-BGLAPU3KQ54 211 aa9.38□□□□□ -0.91
NEDD8-204ENST00000526430 LOC100130705A0A1B0GUX0 176 aa9.37□□□□□ -0.91
NEDD8-204ENST00000526430 CLIC3O95833 236 aa9.37□□□□□ -0.91
NEDD8-204ENST00000526430 RENP00797 406 aa9.37□□□□□ -0.91
NEDD8-204ENST00000526430 TACSTD2P09758 323 aa9.37□□□□□ -0.91
NEDD8-204ENST00000526430 CBR1P16152 277 aa9.37□□□□□ -0.91
NEDD8-204ENST00000526430 ZNF14P17017 642 aaPredicted RBP9.37□□□□□ -0.91
NEDD8-204ENST00000526430 CRABP1P29762 137 aa9.37□□□□□ -0.91
NEDD8-204ENST00000526430 RAD23AP54725 363 aa9.37□□□□□ -0.91
NEDD8-204ENST00000526430 CDH15P55291 814 aa9.37□□□□□ -0.91
NEDD8-204ENST00000526430 PSG4Q00888 419 aa9.37□□□□□ -0.91
NEDD8-204ENST00000526430 HSF2Q03933 536 aa9.37□□□□□ -0.91
NEDD8-204ENST00000526430 PIGFQ07326 219 aa9.37□□□□□ -0.91
NEDD8-204ENST00000526430 FOXL1Q12952 345 aa9.37□□□□□ -0.91
NEDD8-204ENST00000526430 SNAPC1Q16533 368 aa9.37□□□□□ -0.91
NEDD8-204ENST00000526430 SGCAQ16586 387 aa9.37□□□□□ -0.91
NEDD8-204ENST00000526430 PCK2Q16822 640 aa9.37□□□□□ -0.91
NEDD8-204ENST00000526430 TMEM108Q6UXF1 575 aa9.37□□□□□ -0.91
NEDD8-204ENST00000526430 MDP1Q86V88 176 aa9.37□□□□□ -0.91
NEDD8-204ENST00000526430 JAZF1Q86VZ6 243 aa9.37□□□□□ -0.91
NEDD8-204ENST00000526430 GLB1L2Q8IW92 636 aa9.37□□□□□ -0.91
NEDD8-204ENST00000526430 LRRC18Q8N456 261 aa9.37□□□□□ -0.91
NEDD8-204ENST00000526430 TMEM163Q8TC26 289 aa9.37□□□□□ -0.91
NEDD8-204ENST00000526430 MRPL24Q96A35 216 aaKnown RBP9.37□□□□□ -0.91
NEDD8-204ENST00000526430 MUCL1Q96DR8 90 aa9.37□□□□□ -0.91
NEDD8-204ENST00000526430 IL4I1Q96RQ9 567 aa9.37□□□□□ -0.91
NEDD8-204ENST00000526430 TEAD3Q99594 435 aa9.37□□□□□ -0.91
NEDD8-204ENST00000526430 RERGLQ9H628 205 aa9.37□□□□□ -0.91
NEDD8-204ENST00000526430 WDR76Q9H967 626 aa9.37□□□□□ -0.91
NEDD8-204ENST00000526430 OBP2BQ9NPH6 170 aa9.37□□□□□ -0.91
NEDD8-204ENST00000526430 SMPD3Q9NY59 655 aaPredicted RBP9.37□□□□□ -0.91
NEDD8-204ENST00000526430 AMDHD2Q9Y303 409 aa9.37□□□□□ -0.91
NEDD8-204ENST00000526430 LHFPL6Q9Y693 200 aa9.37□□□□□ -0.91
NEDD8-204ENST00000526430 IGHV1-18A0A0C4DH31 117 aa9.36□□□□□ -0.91
NEDD8-204ENST00000526430 A0A1W2PPL8 197 aa9.36□□□□□ -0.91
NEDD8-204ENST00000526430 TVP23AA6NH52 213 aa9.36□□□□□ -0.91
NEDD8-204ENST00000526430 H0YHG0 523 aa9.36□□□□□ -0.91
NEDD8-204ENST00000526430 CST2P09228 141 aa9.36□□□□□ -0.91
NEDD8-204ENST00000526430 ZNF32P17041 273 aa9.36□□□□□ -0.91
NEDD8-204ENST00000526430 NPR2P20594 1047 aa9.36□□□□□ -0.91
NEDD8-204ENST00000526430 MSR1P21757 451 aa9.36□□□□□ -0.91
NEDD8-204ENST00000526430 RPS27P42677 84 aaKnown RBP9.36□□□□□ -0.91
NEDD8-204ENST00000526430 PTDSS1P48651 473 aaKnown RBP9.36□□□□□ -0.91
NEDD8-204ENST00000526430 FABP6P51161 128 aa9.36□□□□□ -0.91
NEDD8-204ENST00000526430 ZNF84P51523 738 aa9.36□□□□□ -0.91
NEDD8-204ENST00000526430 LSM6P62312 80 aaKnown RBP9.36□□□□□ -0.91
NEDD8-204ENST00000526430 RAB1AP62820 205 aa9.36□□□□□ -0.91
NEDD8-204ENST00000526430 TEKQ02763 1124 aa9.36□□□□□ -0.91
NEDD8-204ENST00000526430 CCDC92Q53HC0 331 aaPredicted RBP9.36□□□□□ -0.91
NEDD8-204ENST00000526430 SLC25A30Q5SVS4 291 aa9.36□□□□□ -0.91
NEDD8-204ENST00000526430 C1QTNF12Q5T7M4 302 aa9.36□□□□□ -0.91
NEDD8-204ENST00000526430 SLC22A25Q6T423 547 aa9.36□□□□□ -0.91
NEDD8-204ENST00000526430 USP51Q70EK9 711 aa9.36□□□□□ -0.91
NEDD8-204ENST00000526430 TIGD4Q8IY51 512 aa9.36□□□□□ -0.91
NEDD8-204ENST00000526430 CCDC36Q8IYA8 594 aa9.36□□□□□ -0.91
NEDD8-204ENST00000526430 ENTHD1Q8IYW4 607 aa9.36□□□□□ -0.91
NEDD8-204ENST00000526430 OR10S1Q8NGN2 331 aa9.36□□□□□ -0.91
NEDD8-204ENST00000526430 OR2T4Q8NH00 348 aa9.36□□□□□ -0.91
NEDD8-204ENST00000526430 RHOXF1Q8NHV9 184 aa9.36□□□□□ -0.91
NEDD8-204ENST00000526430 APH1BQ8WW43 257 aa9.36□□□□□ -0.91
NEDD8-204ENST00000526430 TFAP2CQ92754 450 aa9.36□□□□□ -0.91
NEDD8-204ENST00000526430 MS4A3Q96HJ5 214 aa9.36□□□□□ -0.91
NEDD8-204ENST00000526430 MAP6Q96JE9 813 aa9.36□□□□□ -0.91
NEDD8-204ENST00000526430 RDH12Q96NR8 316 aa9.36□□□□□ -0.91
NEDD8-204ENST00000526430 BPESC1Q9GZL8 116 aa9.36□□□□□ -0.91
NEDD8-204ENST00000526430 WNT5BQ9H1J7 359 aa9.36□□□□□ -0.91
NEDD8-204ENST00000526430 PNRC2Q9NPJ4 139 aaKnown RBP9.36□□□□□ -0.91
NEDD8-204ENST00000526430 C8orf4Q9NR00 106 aa9.36□□□□□ -0.91
NEDD8-204ENST00000526430 CYB5R1Q9UHQ9 305 aa9.36□□□□□ -0.91
NEDD8-204ENST00000526430 POU2F3Q9UKI9 436 aa9.36□□□□□ -0.91
NEDD8-204ENST00000526430 LOC100509620A0A075B734 347 aa9.35□□□□□ -0.91
NEDD8-204ENST00000526430 RIIAD1A6NNX1 92 aa9.35□□□□□ -0.91
NEDD8-204ENST00000526430 PRR23D1E9PI22 279 aaPredicted RBP9.35□□□□□ -0.91
NEDD8-204ENST00000526430 H0YJX3 145 aa9.35□□□□□ -0.91
NEDD8-204ENST00000526430 WBP4O75554 376 aaKnown RBP9.35□□□□□ -0.91
NEDD8-204ENST00000526430 GLCEO94923 617 aa9.35□□□□□ -0.91
NEDD8-204ENST00000526430 WNT11O96014 354 aa9.35□□□□□ -0.91
NEDD8-204ENST00000526430 IFNGP01579 166 aa9.35□□□□□ -0.91
NEDD8-204ENST00000526430 GNAO1P09471 354 aa9.35□□□□□ -0.91
NEDD8-204ENST00000526430 PRR23D2P0DMB1 279 aaPredicted RBP9.35□□□□□ -0.91
NEDD8-204ENST00000526430 NR2C1P13056 603 aa9.35□□□□□ -0.91
NEDD8-204ENST00000526430 ZNF35P13682 527 aa9.35□□□□□ -0.91
NEDD8-204ENST00000526430 ZNF3P17036 446 aa9.35□□□□□ -0.91
NEDD8-204ENST00000526430 ANOS1P23352 680 aa9.35□□□□□ -0.91
NEDD8-204ENST00000526430 PTAFRP25105 342 aa9.35□□□□□ -0.91
NEDD8-204ENST00000526430 CD40P25942 277 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms