RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 POM121CA8CG34 1229 aa5.52□□□□□ -1.53
CD44-221ENST00000526000 CEACAM18A8MTB9 384 aa5.52□□□□□ -1.53
CD44-221ENST00000526000 H0YL77 283 aa5.52□□□□□ -1.53
CD44-221ENST00000526000 ABHD16AO95870 558 aa5.52□□□□□ -1.53
CD44-221ENST00000526000 KNG1P01042 644 aa5.52□□□□□ -1.53
CD44-221ENST00000526000 IGHMP01871 453 aa5.52□□□□□ -1.53
CD44-221ENST00000526000 MT-ND1P03886 318 aa5.52□□□□□ -1.53
CD44-221ENST00000526000 SEMG1P04279 462 aa5.52□□□□□ -1.53
CD44-221ENST00000526000 FABP3P05413 133 aa5.52□□□□□ -1.53
CD44-221ENST00000526000 CRYBA1P05813 215 aa5.52□□□□□ -1.53
CD44-221ENST00000526000 RNASE1P07998 156 aaKnown RBP5.52□□□□□ -1.53
CD44-221ENST00000526000 WNT2P09544 360 aa5.52□□□□□ -1.53
CD44-221ENST00000526000 NCK1P16333 377 aa5.52□□□□□ -1.53
CD44-221ENST00000526000 SELEP16581 610 aa5.52□□□□□ -1.53
CD44-221ENST00000526000 ATP6V1B2P21281 511 aa5.52□□□□□ -1.53
CD44-221ENST00000526000 FUT4P22083 530 aa5.52□□□□□ -1.53
CD44-221ENST00000526000 GUCA1AP43080 201 aaPredicted RBP5.52□□□□□ -1.53
CD44-221ENST00000526000 MTNR1AP48039 350 aa5.52□□□□□ -1.53
CD44-221ENST00000526000 ARHGDIAP52565 204 aa5.52□□□□□ -1.53
CD44-221ENST00000526000 PRSS12P56730 875 aa5.52□□□□□ -1.53
CD44-221ENST00000526000 TAS2R41P59536 307 aa5.52□□□□□ -1.53
CD44-221ENST00000526000 KRTAP10-3P60369 221 aa5.52□□□□□ -1.53
CD44-221ENST00000526000 CTXN1P60606 82 aa5.52□□□□□ -1.53
CD44-221ENST00000526000 MRPS34P82930 218 aaKnown RBP5.52□□□□□ -1.53
CD44-221ENST00000526000 HOXA4Q00056 320 aaPredicted RBP5.52□□□□□ -1.53
CD44-221ENST00000526000 PAX8Q06710 450 aa5.52□□□□□ -1.53
CD44-221ENST00000526000 ST3GAL3Q11203 375 aa5.52□□□□□ -1.53
CD44-221ENST00000526000 CDK5R2Q13319 367 aa5.52□□□□□ -1.53
CD44-221ENST00000526000 HLXQ14774 488 aaPredicted RBP5.52□□□□□ -1.53
CD44-221ENST00000526000 ESCO2Q56NI9 601 aa5.52□□□□□ -1.53
CD44-221ENST00000526000 ARMC4Q5T2S8 1044 aa5.52□□□□□ -1.53
CD44-221ENST00000526000 MBNL2Q5VZF2 373 aaKnown RBP5.52□□□□□ -1.53
CD44-221ENST00000526000 RUSC1-AS1Q66K80 236 aa5.52□□□□□ -1.53
CD44-221ENST00000526000 HIST2H2BDQ6DRA6 164 aa5.52□□□□□ -1.53
CD44-221ENST00000526000 FIP1L1Q6UN15 594 aaKnown RBP5.52□□□□□ -1.53
CD44-221ENST00000526000 LYPD2Q6UXB3 125 aa5.52□□□□□ -1.53
CD44-221ENST00000526000 CYP2R1Q6VVX0 501 aa5.52□□□□□ -1.53
CD44-221ENST00000526000 DPPA2Q7Z7J5 298 aa5.52□□□□□ -1.53
CD44-221ENST00000526000 SPATA24Q86W54 205 aa5.52□□□□□ -1.53
CD44-221ENST00000526000 ALDH16A1Q8IZ83 802 aa5.52□□□□□ -1.53
CD44-221ENST00000526000 RNF113BQ8IZP6 322 aaKnown RBP5.52□□□□□ -1.53
CD44-221ENST00000526000 OFCC1Q8IZS5 231 aa5.52□□□□□ -1.53
CD44-221ENST00000526000 PARP8Q8N3A8 854 aa5.52□□□□□ -1.53
CD44-221ENST00000526000 SPICQ8N5J4 248 aa5.52□□□□□ -1.53
CD44-221ENST00000526000 BOLLQ8N9W6 283 aaKnown RBP5.52□□□□□ -1.53
CD44-221ENST00000526000 PAPD5Q8NDF8 572 aaKnown RBP5.52□□□□□ -1.53
CD44-221ENST00000526000 OR51A7Q8NH64 312 aa5.52□□□□□ -1.53
CD44-221ENST00000526000 CLPTM1LQ96KA5 538 aa5.52□□□□□ -1.53
CD44-221ENST00000526000 C7orf34Q96L11 122 aa5.52□□□□□ -1.53
CD44-221ENST00000526000 RBP7Q96R05 134 aa5.52□□□□□ -1.53
CD44-221ENST00000526000 OR2V2Q96R30 315 aa5.52□□□□□ -1.53
CD44-221ENST00000526000 PKP2Q99959 881 aa5.52□□□□□ -1.53
CD44-221ENST00000526000 ELOVL3Q9HB03 270 aa5.52□□□□□ -1.53
CD44-221ENST00000526000 KRCC1Q9NPI7 259 aaPredicted RBP5.52□□□□□ -1.53
CD44-221ENST00000526000 CYSLTR2Q9NS75 346 aa5.52□□□□□ -1.53
CD44-221ENST00000526000 ARMC1Q9NVT9 282 aa5.52□□□□□ -1.53
CD44-221ENST00000526000 PTTG3PQ9NZH4 202 aa5.52□□□□□ -1.53
CD44-221ENST00000526000 GMPR2Q9P2T1 348 aaKnown RBP5.52□□□□□ -1.53
CD44-221ENST00000526000 RHCGQ9UBD6 479 aa5.52□□□□□ -1.53
CD44-221ENST00000526000 OR5V1Q9UGF6 321 aa5.52□□□□□ -1.53
CD44-221ENST00000526000 RIMS3Q9UJD0 308 aa5.52□□□□□ -1.53
CD44-221ENST00000526000 ZDHHC8Q9ULC8 765 aa5.52□□□□□ -1.53
CD44-221ENST00000526000 PPP1R3CQ9UQK1 317 aa5.52□□□□□ -1.53
CD44-221ENST00000526000 A0A1W2PRQ8 180 aa5.51□□□□□ -1.53
CD44-221ENST00000526000 TMEM178BH3BS89 294 aa5.51□□□□□ -1.53
CD44-221ENST00000526000 IMPA2O14732 288 aa5.51□□□□□ -1.53
CD44-221ENST00000526000 FKBP6O75344 327 aa5.51□□□□□ -1.53
CD44-221ENST00000526000 DBHP09172 617 aa5.51□□□□□ -1.53
CD44-221ENST00000526000 IFI30P13284 250 aa5.51□□□□□ -1.53
CD44-221ENST00000526000 RPS2P15880 293 aaKnown RBP5.51□□□□□ -1.53
CD44-221ENST00000526000 TNFSF4P23510 183 aa5.51□□□□□ -1.53
CD44-221ENST00000526000 MSX2P35548 267 aaPredicted RBP5.51□□□□□ -1.53
CD44-221ENST00000526000 IFNGR2P38484 337 aa5.51□□□□□ -1.53
CD44-221ENST00000526000 HTR5AP47898 357 aa5.51□□□□□ -1.53
CD44-221ENST00000526000 CENPAP49450 140 aa5.51□□□□□ -1.53
CD44-221ENST00000526000 DAP3P51398 398 aaKnown RBP5.51□□□□□ -1.53
CD44-221ENST00000526000 BTG1P62324 171 aa5.51□□□□□ -1.53
CD44-221ENST00000526000 GNB2P62879 340 aa5.51□□□□□ -1.53
CD44-221ENST00000526000 DBPQ10586 325 aaPredicted RBP5.51□□□□□ -1.53
CD44-221ENST00000526000 DGCR6Q14129 220 aa5.51□□□□□ -1.53
CD44-221ENST00000526000 ENDOGQ14249 297 aaKnown RBP5.51□□□□□ -1.53
CD44-221ENST00000526000 TRAM2Q15035 370 aa5.51□□□□□ -1.53
CD44-221ENST00000526000 ANKDD1AQ495B1 522 aa5.51□□□□□ -1.53
CD44-221ENST00000526000 ALG10Q5BKT4 473 aa5.51□□□□□ -1.53
CD44-221ENST00000526000 C10orf128Q5T292 105 aa5.51□□□□□ -1.53
CD44-221ENST00000526000 FAM27BQ5VT28 67 aa5.51□□□□□ -1.53
CD44-221ENST00000526000 OR2T2Q6IF00 324 aa5.51□□□□□ -1.53
CD44-221ENST00000526000 SLC27A4Q6P1M0 643 aa5.51□□□□□ -1.53
CD44-221ENST00000526000 C17orf107Q6ZR85 190 aa5.51□□□□□ -1.53
CD44-221ENST00000526000 VTCN1Q7Z7D3 282 aa5.51□□□□□ -1.53
CD44-221ENST00000526000 ZDHHC21Q8IVQ6 265 aa5.51□□□□□ -1.53
CD44-221ENST00000526000 PDZD9Q8IXQ8 264 aa5.51□□□□□ -1.53
CD44-221ENST00000526000 ADGRG5Q8IZF4 528 aa5.51□□□□□ -1.53
CD44-221ENST00000526000 OR10AD1Q8NGE0 317 aa5.51□□□□□ -1.53
CD44-221ENST00000526000 OR10S1Q8NGN2 331 aa5.51□□□□□ -1.53
CD44-221ENST00000526000 FAM110DQ8TAY7 271 aaPredicted RBP5.51□□□□□ -1.53
CD44-221ENST00000526000 TMEM239Q8WW34 195 aa5.51□□□□□ -1.53
CD44-221ENST00000526000 UTP4Q969X6 686 aaKnown RBP5.51□□□□□ -1.53
CD44-221ENST00000526000 NMD3Q96D46 503 aaKnown RBP5.51□□□□□ -1.53
CD44-221ENST00000526000 RSRC1Q96IZ7 334 aaKnown RBP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms