RNA–Protein interactions for RNA: ENST00000525167.1

TSKU-202, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-202ENST00000525167 ASH2LQ9UBL3 628 aa14.36□□□□□ -0.11
TSKU-202ENST00000525167 A0A1B0GUS0 222 aa14.35□□□□□ -0.11
TSKU-202ENST00000525167 LRRC30A6NM36 301 aa14.35□□□□□ -0.11
TSKU-202ENST00000525167 KHDRBS3O75525 346 aaKnown RBP14.35□□□□□ -0.11
TSKU-202ENST00000525167 FUT4P22083 530 aa14.35□□□□□ -0.11
TSKU-202ENST00000525167 SDHAP31040 664 aa14.35□□□□□ -0.11
TSKU-202ENST00000525167 ERFP50548 548 aa14.35□□□□□ -0.11
TSKU-202ENST00000525167 BPIFB3P59826 476 aa14.35□□□□□ -0.11
TSKU-202ENST00000525167 KRR1Q13601 381 aaKnown RBP14.35□□□□□ -0.11
TSKU-202ENST00000525167 KCNMB1Q16558 191 aa14.35□□□□□ -0.11
TSKU-202ENST00000525167 PDLIM3Q53GG5 364 aaPredicted RBP14.35□□□□□ -0.11
TSKU-202ENST00000525167 PGM2L1Q6PCE3 622 aa14.35□□□□□ -0.11
TSKU-202ENST00000525167 C16orf87Q6PH81 154 aa14.35□□□□□ -0.11
TSKU-202ENST00000525167 RRM2BQ7LG56 351 aa14.35□□□□□ -0.11
TSKU-202ENST00000525167 NLRC3Q7RTR2 1065 aa14.35□□□□□ -0.11
TSKU-202ENST00000525167 ARPINQ7Z6K5 226 aa14.35□□□□□ -0.11
TSKU-202ENST00000525167 ADCK1Q86TW2 530 aa14.35□□□□□ -0.11
TSKU-202ENST00000525167 APOBEC3DQ96AK3 386 aaPredicted RBP14.35□□□□□ -0.11
TSKU-202ENST00000525167 GPX7Q96SL4 187 aaPredicted RBP14.35□□□□□ -0.11
TSKU-202ENST00000525167 PRDM13Q9H4Q3 707 aa14.35□□□□□ -0.11
TSKU-202ENST00000525167 VSX1Q9NZR4 365 aaPredicted RBP14.35□□□□□ -0.11
TSKU-202ENST00000525167 SNX13Q9Y5W8 968 aa14.35□□□□□ -0.11
TSKU-202ENST00000525167 KIR2DS1A0A191URI9 304 aa14.34□□□□□ -0.11
TSKU-202ENST00000525167 A0A1B0GWJ7 208 aa14.34□□□□□ -0.11
TSKU-202ENST00000525167 J3KTA2 159 aa14.34□□□□□ -0.11
TSKU-202ENST00000525167 SLC16A7O60669 478 aa14.34□□□□□ -0.11
TSKU-202ENST00000525167 TROVE2P10155 538 aaKnown RBP eCLIP14.34□□□□□ -0.11
TSKU-202ENST00000525167 ZNF26P17031 533 aaPredicted RBP14.34□□□□□ -0.11
TSKU-202ENST00000525167 RBMXP38159 391 aaKnown RBP14.34□□□□□ -0.11
TSKU-202ENST00000525167 GPR4P46093 362 aa14.34□□□□□ -0.11
TSKU-202ENST00000525167 YAP1P46937 504 aaKnown RBP14.34□□□□□ -0.11
TSKU-202ENST00000525167 ZNF404Q494X3 552 aa14.34□□□□□ -0.11
TSKU-202ENST00000525167 IFI44LQ53G44 452 aa14.34□□□□□ -0.11
TSKU-202ENST00000525167 CCDC92Q53HC0 331 aaPredicted RBP14.34□□□□□ -0.11
TSKU-202ENST00000525167 C1orf94Q6P1W5 598 aa14.34□□□□□ -0.11
TSKU-202ENST00000525167 VTCN1Q7Z7D3 282 aa14.34□□□□□ -0.11
TSKU-202ENST00000525167 OR5AS1Q8N127 324 aa14.34□□□□□ -0.11
TSKU-202ENST00000525167 OR10AD1Q8NGE0 317 aa14.34□□□□□ -0.11
TSKU-202ENST00000525167 OR8B3Q8NGG8 313 aa14.34□□□□□ -0.11
TSKU-202ENST00000525167 SLC7A6Q92536 515 aa14.34□□□□□ -0.11
TSKU-202ENST00000525167 TMIGD2Q96BF3 282 aa14.34□□□□□ -0.11
TSKU-202ENST00000525167 OR8B2Q96RD0 313 aa14.34□□□□□ -0.11
TSKU-202ENST00000525167 COQ7Q99807 217 aa14.34□□□□□ -0.11
TSKU-202ENST00000525167 SLC30A2Q9BRI3 323 aa14.34□□□□□ -0.11
TSKU-202ENST00000525167 TMEM246Q9BRR3 403 aa14.34□□□□□ -0.11
TSKU-202ENST00000525167 HDHD2Q9H0R4 259 aa14.34□□□□□ -0.11
TSKU-202ENST00000525167 NRIP3Q9NQ35 241 aa14.34□□□□□ -0.11
TSKU-202ENST00000525167 SAR1AQ9NR31 198 aa14.34□□□□□ -0.11
TSKU-202ENST00000525167 TRAV40A0A0B4J280 105 aa14.33□□□□□ -0.12
TSKU-202ENST00000525167 IQCF6A8MYZ5 107 aa14.33□□□□□ -0.12
TSKU-202ENST00000525167 PHYHO14832 338 aa14.33□□□□□ -0.12
TSKU-202ENST00000525167 NDUFB2O95178 105 aa14.33□□□□□ -0.12
TSKU-202ENST00000525167 SELEP16581 610 aa14.33□□□□□ -0.12
TSKU-202ENST00000525167 GATA4P43694 442 aa14.33□□□□□ -0.12
TSKU-202ENST00000525167 HLXQ14774 488 aaPredicted RBP14.33□□□□□ -0.12
TSKU-202ENST00000525167 ZNF362Q5T0B9 420 aaPredicted RBP14.33□□□□□ -0.12
TSKU-202ENST00000525167 OR2T2Q6IF00 324 aa14.33□□□□□ -0.12
TSKU-202ENST00000525167 CYP4Z1Q86W10 505 aa14.33□□□□□ -0.12
TSKU-202ENST00000525167 POU5F2Q8N7G0 328 aa14.33□□□□□ -0.12
TSKU-202ENST00000525167 CELF2-AS1Q8N7Q2 184 aa14.33□□□□□ -0.12
TSKU-202ENST00000525167 GJC3Q8NFK1 279 aa14.33□□□□□ -0.12
TSKU-202ENST00000525167 ZNF420Q8TAQ5 688 aaPredicted RBP14.33□□□□□ -0.12
TSKU-202ENST00000525167 ERGIC1Q969X5 290 aa14.33□□□□□ -0.12
TSKU-202ENST00000525167 SYT4Q9H2B2 425 aa14.33□□□□□ -0.12
TSKU-202ENST00000525167 PTTG3PQ9NZH4 202 aa14.33□□□□□ -0.12
TSKU-202ENST00000525167 COA3Q9Y2R0 106 aaPredicted RBP14.33□□□□□ -0.12
TSKU-202ENST00000525167 LOC100653049A0A140TA62 436 aa14.32□□□□□ -0.12
TSKU-202ENST00000525167 SLC22A2O15244 555 aa14.32□□□□□ -0.12
TSKU-202ENST00000525167 RER1O15258 196 aa14.32□□□□□ -0.12
TSKU-202ENST00000525167 MLNRO43193 412 aa14.32□□□□□ -0.12
TSKU-202ENST00000525167 KRT34O76011 436 aa14.32□□□□□ -0.12
TSKU-202ENST00000525167 CYB5R3P00387 301 aaPredicted RBP14.32□□□□□ -0.12
TSKU-202ENST00000525167 DBHP09172 617 aa14.32□□□□□ -0.12
TSKU-202ENST00000525167 PITPNBP48739 271 aa14.32□□□□□ -0.12
TSKU-202ENST00000525167 HIST1H3AP68431 136 aa14.32□□□□□ -0.12
TSKU-202ENST00000525167 DEFA6Q01524 100 aa14.32□□□□□ -0.12
TSKU-202ENST00000525167 HIST2H3PS2Q5TEC6 136 aa14.32□□□□□ -0.12
TSKU-202ENST00000525167 DNM1P34Q6PK57 102 aa14.32□□□□□ -0.12
TSKU-202ENST00000525167 TBPL2Q6SJ96 375 aa14.32□□□□□ -0.12
TSKU-202ENST00000525167 COLCA1Q6ZS62 124 aa14.32□□□□□ -0.12
TSKU-202ENST00000525167 HIST2H3AQ71DI3 136 aa14.32□□□□□ -0.12
TSKU-202ENST00000525167 CBLL1Q75N03 491 aa14.32□□□□□ -0.12
TSKU-202ENST00000525167 SPATC1Q76KD6 591 aa14.32□□□□□ -0.12
TSKU-202ENST00000525167 HCAR1Q9BXC0 346 aa14.32□□□□□ -0.12
TSKU-202ENST00000525167 VIPAS39Q9H9C1 493 aa14.32□□□□□ -0.12
TSKU-202ENST00000525167 TMEM100Q9NV29 134 aa14.32□□□□□ -0.12
TSKU-202ENST00000525167 CLN8Q9UBY8 286 aa14.32□□□□□ -0.12
TSKU-202ENST00000525167 SIGLEC7Q9Y286 467 aa14.32□□□□□ -0.12
TSKU-202ENST00000525167 POLR1DQ9Y2S0 133 aa14.32□□□□□ -0.12
TSKU-202ENST00000525167 IGHV3OR16-10A0A075B7F0 116 aa14.31□□□□□ -0.12
TSKU-202ENST00000525167 A0A1W2PRQ8 180 aa14.31□□□□□ -0.12
TSKU-202ENST00000525167 SRRM5B3KS81 715 aa14.31□□□□□ -0.12
TSKU-202ENST00000525167 PTP4A3O75365 173 aa14.31□□□□□ -0.12
TSKU-202ENST00000525167 ZNF682O95780 498 aa14.31□□□□□ -0.12
TSKU-202ENST00000525167 GPANK1O95872 356 aa14.31□□□□□ -0.12
TSKU-202ENST00000525167 TXNDC12O95881 172 aa14.31□□□□□ -0.12
TSKU-202ENST00000525167 IRF2P14316 349 aa14.31□□□□□ -0.12
TSKU-202ENST00000525167 MDKP21741 143 aaPredicted RBP14.31□□□□□ -0.12
TSKU-202ENST00000525167 CRABP1P29762 137 aa14.31□□□□□ -0.12
TSKU-202ENST00000525167 DGCR6Q14129 220 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms