RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 PEG10Q86TG7 708 aaKnown RBP15.74■□□□□ 0.11
CAPN1-203ENST00000525013 LINC00471Q8N535 108 aa15.74■□□□□ 0.11
CAPN1-203ENST00000525013 SLC26A10Q8NG04 563 aa15.74■□□□□ 0.11
CAPN1-203ENST00000525013 OR2Z1Q8NG97 314 aa15.74■□□□□ 0.11
CAPN1-203ENST00000525013 OR52E2Q8NGJ4 325 aa15.74■□□□□ 0.11
CAPN1-203ENST00000525013 OR5L1Q8NGL2 311 aa15.74■□□□□ 0.11
CAPN1-203ENST00000525013 PTP4A1Q93096 173 aa15.74■□□□□ 0.11
CAPN1-203ENST00000525013 RAB39BQ96DA2 213 aa15.74■□□□□ 0.11
CAPN1-203ENST00000525013 DCLRE1CQ96SD1 692 aaKnown RBP15.74■□□□□ 0.11
CAPN1-203ENST00000525013 CDADC1Q9BWV3 514 aa15.74■□□□□ 0.11
CAPN1-203ENST00000525013 MUC13Q9H3R2 512 aa15.74■□□□□ 0.11
CAPN1-203ENST00000525013 CDH10Q9Y6N8 788 aa15.74■□□□□ 0.11
CAPN1-203ENST00000525013 ISPDA4D126 451 aa15.73■□□□□ 0.11
CAPN1-203ENST00000525013 UBOX5O94941 541 aa15.73■□□□□ 0.11
CAPN1-203ENST00000525013 CCNB2O95067 398 aa15.73■□□□□ 0.11
CAPN1-203ENST00000525013 ANPEPP15144 967 aa15.73■□□□□ 0.11
CAPN1-203ENST00000525013 KITLGP21583 273 aa15.73■□□□□ 0.11
CAPN1-203ENST00000525013 CALB2P22676 271 aa15.73■□□□□ 0.11
CAPN1-203ENST00000525013 RGS6P49758 472 aa15.73■□□□□ 0.11
CAPN1-203ENST00000525013 HIST1H3AP68431 136 aa15.73■□□□□ 0.11
CAPN1-203ENST00000525013 SRSF2Q01130 221 aaKnown RBP15.73■□□□□ 0.11
CAPN1-203ENST00000525013 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.73■□□□□ 0.11
CAPN1-203ENST00000525013 SLC3A1Q07837 685 aa15.73■□□□□ 0.11
CAPN1-203ENST00000525013 CDK5R2Q13319 367 aa15.73■□□□□ 0.11
CAPN1-203ENST00000525013 TRIM25Q14258 630 aaKnown RBP15.73■□□□□ 0.11
CAPN1-203ENST00000525013 HLXQ14774 488 aaPredicted RBP15.73■□□□□ 0.11
CAPN1-203ENST00000525013 SLC36A3Q495N2 470 aa15.73■□□□□ 0.11
CAPN1-203ENST00000525013 SPRNQ5BIV9 151 aa15.73■□□□□ 0.11
CAPN1-203ENST00000525013 HIST2H3PS2Q5TEC6 136 aa15.73■□□□□ 0.11
CAPN1-203ENST00000525013 ACSM5Q6NUN0 579 aa15.73■□□□□ 0.11
CAPN1-203ENST00000525013 RPL13AP3Q6NVV1 102 aa15.73■□□□□ 0.11
CAPN1-203ENST00000525013 HIST2H3AQ71DI3 136 aa15.73■□□□□ 0.11
CAPN1-203ENST00000525013 ZBTB46Q86UZ6 589 aa15.73■□□□□ 0.11
CAPN1-203ENST00000525013 LINC00346Q8IVM7 164 aa15.73■□□□□ 0.11
CAPN1-203ENST00000525013 PHC2Q8IXK0 858 aa15.73■□□□□ 0.11
CAPN1-203ENST00000525013 OR2AJ1Q8NGZ0 328 aa15.73■□□□□ 0.11
CAPN1-203ENST00000525013 HAVCR1Q96D42 359 aa15.73■□□□□ 0.11
CAPN1-203ENST00000525013 PITX2Q99697 317 aa15.73■□□□□ 0.11
CAPN1-203ENST00000525013 COQ7Q99807 217 aa15.73■□□□□ 0.11
CAPN1-203ENST00000525013 GAL3ST1Q99999 423 aa15.73■□□□□ 0.11
CAPN1-203ENST00000525013 BTBD10Q9BSF8 475 aa15.73■□□□□ 0.11
CAPN1-203ENST00000525013 TRIM15Q9C019 465 aa15.73■□□□□ 0.11
CAPN1-203ENST00000525013 HDHD2Q9H0R4 259 aa15.73■□□□□ 0.11
CAPN1-203ENST00000525013 PTTG3PQ9NZH4 202 aa15.73■□□□□ 0.11
CAPN1-203ENST00000525013 ATPIF1Q9UII2 106 aa15.73■□□□□ 0.11
CAPN1-203ENST00000525013 TRAV20A0A0B4J274 112 aa15.72■□□□□ 0.11
CAPN1-203ENST00000525013 TCRBV5S2A0A599 114 aa15.72■□□□□ 0.11
CAPN1-203ENST00000525013 DYNC1I1O14576 645 aa15.72■□□□□ 0.11
CAPN1-203ENST00000525013 GASTP01350 101 aa15.72■□□□□ 0.11
CAPN1-203ENST00000525013 CD55P08174 381 aa15.72■□□□□ 0.11
CAPN1-203ENST00000525013 RAC2P15153 192 aa15.72■□□□□ 0.11
CAPN1-203ENST00000525013 MAGEA2P43356 314 aa15.72■□□□□ 0.11
CAPN1-203ENST00000525013 MS4A2Q01362 244 aa15.72■□□□□ 0.11
CAPN1-203ENST00000525013 COX10Q12887 443 aa15.72■□□□□ 0.11
CAPN1-203ENST00000525013 FAM98BQ52LJ0 330 aaKnown RBP15.72■□□□□ 0.11
CAPN1-203ENST00000525013 LCN8Q6JVE9 175 aa15.72■□□□□ 0.11
CAPN1-203ENST00000525013 FAHD2BQ6P2I3 314 aaPredicted RBP15.72■□□□□ 0.11
CAPN1-203ENST00000525013 OR5AS1Q8N127 324 aa15.72■□□□□ 0.11
CAPN1-203ENST00000525013 CYB561A3Q8NBI2 242 aa15.72■□□□□ 0.11
CAPN1-203ENST00000525013 APOBEC3DQ96AK3 386 aaPredicted RBP15.72■□□□□ 0.11
CAPN1-203ENST00000525013 CCDC124Q96CT7 223 aaKnown RBP15.72■□□□□ 0.11
CAPN1-203ENST00000525013 FAHD2AQ96GK7 314 aa15.72■□□□□ 0.11
CAPN1-203ENST00000525013 MAGIXQ9H6Y5 334 aa15.72■□□□□ 0.11
CAPN1-203ENST00000525013 UBAP1Q9NZ09 502 aa15.72■□□□□ 0.11
CAPN1-203ENST00000525013 SAMHD1Q9Y3Z3 626 aaKnown RBP15.72■□□□□ 0.11
CAPN1-203ENST00000525013 U3KQV3 271 aa15.72■□□□□ 0.11
CAPN1-203ENST00000525013 F5H5K5 113 aa15.71■□□□□ 0.11
CAPN1-203ENST00000525013 IGHV2-5P01817 119 aa15.71■□□□□ 0.11
CAPN1-203ENST00000525013 T-ENOLP0DO92 83 aa15.71■□□□□ 0.11
CAPN1-203ENST00000525013 PYCR1P32322 319 aa15.71■□□□□ 0.11
CAPN1-203ENST00000525013 ERFP50548 548 aa15.71■□□□□ 0.11
CAPN1-203ENST00000525013 HNRNPA0Q13151 305 aaKnown RBP15.71■□□□□ 0.11
CAPN1-203ENST00000525013 OR2T5Q6IEZ7 315 aa15.71■□□□□ 0.11
CAPN1-203ENST00000525013 OR2T2Q6IF00 324 aa15.71■□□□□ 0.11
CAPN1-203ENST00000525013 SLC18B1Q6NT16 456 aa15.71■□□□□ 0.11
CAPN1-203ENST00000525013 SHQ1Q6PI26 577 aaKnown RBP15.71■□□□□ 0.11
CAPN1-203ENST00000525013 CFAP77Q6ZQR2 320 aa15.71■□□□□ 0.11
CAPN1-203ENST00000525013 Q6ZR03 302 aa15.71■□□□□ 0.11
CAPN1-203ENST00000525013 AQP11Q8NBQ7 271 aa15.71■□□□□ 0.11
CAPN1-203ENST00000525013 PROKR2Q8NFJ6 384 aa15.71■□□□□ 0.11
CAPN1-203ENST00000525013 OR4C15Q8NGM1 316 aa15.71■□□□□ 0.11
CAPN1-203ENST00000525013 OR2T29Q8NH02 315 aa15.71■□□□□ 0.11
CAPN1-203ENST00000525013 LRGUKQ96M69 825 aa15.71■□□□□ 0.11
CAPN1-203ENST00000525013 REEP1Q9H902 201 aa15.71■□□□□ 0.11
CAPN1-203ENST00000525013 TBC1D23Q9NUY8 699 aa15.71■□□□□ 0.11
CAPN1-203ENST00000525013 PRPF19Q9UMS4 504 aaKnown RBP15.71■□□□□ 0.11
CAPN1-203ENST00000525013 J3QW42 95 aa15.7■□□□□ 0.1
CAPN1-203ENST00000525013 BHLHE40O14503 412 aa15.7■□□□□ 0.1
CAPN1-203ENST00000525013 SURF4O15260 269 aa15.7■□□□□ 0.1
CAPN1-203ENST00000525013 ZNF823P16415 610 aa15.7■□□□□ 0.1
CAPN1-203ENST00000525013 TNFRSF1AP19438 455 aa15.7■□□□□ 0.1
CAPN1-203ENST00000525013 ECH1Q13011 328 aa15.7■□□□□ 0.1
CAPN1-203ENST00000525013 ZNF770Q6IQ21 691 aaPredicted RBP15.7■□□□□ 0.1
CAPN1-203ENST00000525013 RASSF6Q6ZTQ3 369 aa15.7■□□□□ 0.1
CAPN1-203ENST00000525013 ATG16L2Q8NAA4 619 aa15.7■□□□□ 0.1
CAPN1-203ENST00000525013 ITLN1Q8WWA0 313 aa15.7■□□□□ 0.1
CAPN1-203ENST00000525013 CLPTM1LQ96KA5 538 aa15.7■□□□□ 0.1
CAPN1-203ENST00000525013 PLA2G12AQ9BZM1 189 aa15.7■□□□□ 0.1
CAPN1-203ENST00000525013 IL20Q9NYY1 176 aa15.7■□□□□ 0.1
CAPN1-203ENST00000525013 PLPP2O43688 288 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms