RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 ZNF823P16415 610 aa17.83■□□□□ 0.44
TRAPPC9-215ENST00000524162 ZNF23P17027 643 aa17.83■□□□□ 0.44
TRAPPC9-215ENST00000524162 HOXB4P17483 251 aaPredicted RBP17.83■□□□□ 0.44
TRAPPC9-215ENST00000524162 KITLGP21583 273 aa17.83■□□□□ 0.44
TRAPPC9-215ENST00000524162 CRMP1Q14194 572 aa17.83■□□□□ 0.44
TRAPPC9-215ENST00000524162 MEP1BQ16820 701 aa17.83■□□□□ 0.44
TRAPPC9-215ENST00000524162 ASRGL1Q7L266 308 aa17.83■□□□□ 0.44
TRAPPC9-215ENST00000524162 CYB561A3Q8NBI2 242 aa17.83■□□□□ 0.44
TRAPPC9-215ENST00000524162 ICA1LQ8NDH6 482 aa17.83■□□□□ 0.44
TRAPPC9-215ENST00000524162 HPS1Q92902 700 aa17.83■□□□□ 0.44
TRAPPC9-215ENST00000524162 APOBEC3DQ96AK3 386 aaPredicted RBP17.83■□□□□ 0.44
TRAPPC9-215ENST00000524162 POM121Q96HA1 1249 aa17.83■□□□□ 0.44
TRAPPC9-215ENST00000524162 ANK3Q12955 4377 aaKnown RBP17.82■□□□□ 0.44
TRAPPC9-215ENST00000524162 H3BN98 237 aa17.82■□□□□ 0.44
TRAPPC9-215ENST00000524162 HLA-DQA2P01906 255 aa17.82■□□□□ 0.44
TRAPPC9-215ENST00000524162 HPXP02790 462 aa17.82■□□□□ 0.44
TRAPPC9-215ENST00000524162 HMGN1P05114 100 aa17.82■□□□□ 0.44
TRAPPC9-215ENST00000524162 FCGR1AP12314 374 aa17.82■□□□□ 0.44
TRAPPC9-215ENST00000524162 RAC2P15153 192 aa17.82■□□□□ 0.44
TRAPPC9-215ENST00000524162 FMO3P31513 532 aa17.82■□□□□ 0.44
TRAPPC9-215ENST00000524162 MPV17P39210 176 aa17.82■□□□□ 0.44
TRAPPC9-215ENST00000524162 GZMKP49863 264 aa17.82■□□□□ 0.44
TRAPPC9-215ENST00000524162 C1orf146Q5VVC0 180 aa17.82■□□□□ 0.44
TRAPPC9-215ENST00000524162 FBXW12Q6X9E4 464 aa17.82■□□□□ 0.44
TRAPPC9-215ENST00000524162 PARP8Q8N3A8 854 aa17.82■□□□□ 0.44
TRAPPC9-215ENST00000524162 MAPK1IP1LQ8NDC0 245 aa17.82■□□□□ 0.44
TRAPPC9-215ENST00000524162 PTP4A1Q93096 173 aa17.82■□□□□ 0.44
TRAPPC9-215ENST00000524162 HAVCR1Q96D42 359 aa17.82■□□□□ 0.44
TRAPPC9-215ENST00000524162 ATF6BQ99941 703 aa17.82■□□□□ 0.44
TRAPPC9-215ENST00000524162 BPESC1Q9GZL8 116 aa17.82■□□□□ 0.44
TRAPPC9-215ENST00000524162 FN3KQ9H479 309 aa17.82■□□□□ 0.44
TRAPPC9-215ENST00000524162 PNRC2Q9NPJ4 139 aaKnown RBP17.82■□□□□ 0.44
TRAPPC9-215ENST00000524162 DDX28Q9NUL7 540 aaKnown RBP17.82■□□□□ 0.44
TRAPPC9-215ENST00000524162 GRIP1Q9Y3R0 1128 aa17.82■□□□□ 0.44
TRAPPC9-215ENST00000524162 CD55P08174 381 aa17.81■□□□□ 0.44
TRAPPC9-215ENST00000524162 SPI1P17947 270 aa17.81■□□□□ 0.44
TRAPPC9-215ENST00000524162 OTX1P32242 354 aaPredicted RBP17.81■□□□□ 0.44
TRAPPC9-215ENST00000524162 CRYBB2P43320 205 aa17.81■□□□□ 0.44
TRAPPC9-215ENST00000524162 ZNF81P51508 661 aa17.81■□□□□ 0.44
TRAPPC9-215ENST00000524162 CDK5Q00535 292 aa17.81■□□□□ 0.44
TRAPPC9-215ENST00000524162 PSG7Q13046 419 aa17.81■□□□□ 0.44
TRAPPC9-215ENST00000524162 ATP6AP1Q15904 470 aa17.81■□□□□ 0.44
TRAPPC9-215ENST00000524162 RSPO1Q2MKA7 263 aaPredicted RBP17.81■□□□□ 0.44
TRAPPC9-215ENST00000524162 SPATA46Q5T0L3 261 aa17.81■□□□□ 0.44
TRAPPC9-215ENST00000524162 FAHD1Q6P587 224 aa17.81■□□□□ 0.44
TRAPPC9-215ENST00000524162 CFAP77Q6ZQR2 320 aa17.81■□□□□ 0.44
TRAPPC9-215ENST00000524162 RHOUQ7L0Q8 258 aa17.81■□□□□ 0.44
TRAPPC9-215ENST00000524162 C1QTNF5Q9BXJ0 243 aa17.81■□□□□ 0.44
TRAPPC9-215ENST00000524162 TMEM160Q9NX00 188 aa17.81■□□□□ 0.44
TRAPPC9-215ENST00000524162 STARD10Q9Y365 291 aa17.81■□□□□ 0.44
TRAPPC9-215ENST00000524162 COMMD3-BMI1R4GMX3 469 aa17.81■□□□□ 0.44
TRAPPC9-215ENST00000524162 RP2O75695 350 aa17.8■□□□□ 0.44
TRAPPC9-215ENST00000524162 NCR1O76036 304 aa17.8■□□□□ 0.44
TRAPPC9-215ENST00000524162 PAICSP22234 425 aaKnown RBP17.8■□□□□ 0.44
TRAPPC9-215ENST00000524162 PPP2R2BQ00005 443 aa17.8■□□□□ 0.44
TRAPPC9-215ENST00000524162 TMEM255AQ5JRV8 349 aa17.8■□□□□ 0.44
TRAPPC9-215ENST00000524162 LINC01590Q5TEZ4 76 aa17.8■□□□□ 0.44
TRAPPC9-215ENST00000524162 CORO6Q6QEF8 472 aa17.8■□□□□ 0.44
TRAPPC9-215ENST00000524162 Q71RC1 249 aaPredicted RBP17.8■□□□□ 0.44
TRAPPC9-215ENST00000524162 HIPK1Q86Z02 1210 aa17.8■□□□□ 0.44
TRAPPC9-215ENST00000524162 OR5K1Q8NHB7 308 aa17.8■□□□□ 0.44
TRAPPC9-215ENST00000524162 SLC7A6Q92536 515 aa17.8■□□□□ 0.44
TRAPPC9-215ENST00000524162 PITX2Q99697 317 aa17.8■□□□□ 0.44
TRAPPC9-215ENST00000524162 TEX12Q9BXU0 123 aa17.8■□□□□ 0.44
TRAPPC9-215ENST00000524162 MARCH7Q9H992 704 aa17.8■□□□□ 0.44
TRAPPC9-215ENST00000524162 SLC25A19Q9HC21 320 aa17.8■□□□□ 0.44
TRAPPC9-215ENST00000524162 AP4S1Q9Y587 144 aa17.8■□□□□ 0.44
TRAPPC9-215ENST00000524162 IGHV4-61A0A0C4DH41 118 aa17.79■□□□□ 0.44
TRAPPC9-215ENST00000524162 LILRA1O75019 489 aa17.79■□□□□ 0.44
TRAPPC9-215ENST00000524162 TIPRLO75663 272 aa17.79■□□□□ 0.44
TRAPPC9-215ENST00000524162 DBHP09172 617 aa17.79■□□□□ 0.44
TRAPPC9-215ENST00000524162 ACSM4P0C7M7 580 aa17.79■□□□□ 0.44
TRAPPC9-215ENST00000524162 FASP25445 335 aa17.79■□□□□ 0.44
TRAPPC9-215ENST00000524162 PYCR1P32322 319 aa17.79■□□□□ 0.44
TRAPPC9-215ENST00000524162 MAGEB1P43366 347 aa17.79■□□□□ 0.44
TRAPPC9-215ENST00000524162 ENTPD1P49961 510 aa17.79■□□□□ 0.44
TRAPPC9-215ENST00000524162 CHN2P52757 468 aa17.79■□□□□ 0.44
TRAPPC9-215ENST00000524162 CDK5R2Q13319 367 aa17.79■□□□□ 0.44
TRAPPC9-215ENST00000524162 GGTLC2Q14390 218 aa17.79■□□□□ 0.44
TRAPPC9-215ENST00000524162 GINS1Q14691 196 aa17.79■□□□□ 0.44
TRAPPC9-215ENST00000524162 CARTPTQ16568 116 aa17.79■□□□□ 0.44
TRAPPC9-215ENST00000524162 OTPQ5XKR4 325 aa17.79■□□□□ 0.44
TRAPPC9-215ENST00000524162 CYB5R2Q6BCY4 276 aa17.79■□□□□ 0.44
TRAPPC9-215ENST00000524162 HS3ST5Q8IZT8 346 aa17.79■□□□□ 0.44
TRAPPC9-215ENST00000524162 ATG16L2Q8NAA4 619 aa17.79■□□□□ 0.44
TRAPPC9-215ENST00000524162 ZNRF4Q8WWF5 429 aa17.79■□□□□ 0.44
TRAPPC9-215ENST00000524162 C1orf159Q96HA4 380 aa17.79■□□□□ 0.44
TRAPPC9-215ENST00000524162 MAP6Q96JE9 813 aa17.79■□□□□ 0.44
TRAPPC9-215ENST00000524162 PURGQ9UJV8 347 aaKnown RBP17.79■□□□□ 0.44
TRAPPC9-215ENST00000524162 SURF4O15260 269 aa17.78■□□□□ 0.44
TRAPPC9-215ENST00000524162 PRODHO43272 600 aa17.78■□□□□ 0.44
TRAPPC9-215ENST00000524162 CIB2O75838 187 aa17.78■□□□□ 0.44
TRAPPC9-215ENST00000524162 IGHV1-46P01743 117 aa17.78■□□□□ 0.44
TRAPPC9-215ENST00000524162 IGHV4-31P0DP07 118 aa17.78■□□□□ 0.44
TRAPPC9-215ENST00000524162 PRKACGP22612 351 aa17.78■□□□□ 0.44
TRAPPC9-215ENST00000524162 TPTEP56180 551 aa17.78■□□□□ 0.44
TRAPPC9-215ENST00000524162 ESRRGP62508 458 aa17.78■□□□□ 0.44
TRAPPC9-215ENST00000524162 CCL8P80075 99 aa17.78■□□□□ 0.44
TRAPPC9-215ENST00000524162 CCNIQ14094 377 aa17.78■□□□□ 0.44
TRAPPC9-215ENST00000524162 C6orf52Q5T4I8 152 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms