RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 FARSAQ9Y285 508 aaKnown RBP9.89□□□□□ -0.83
HDAC9-228ENST00000524023 SESN1Q9Y6P5 492 aa9.89□□□□□ -0.83
HDAC9-228ENST00000524023 PHF3Q92576 2039 aaKnown RBP9.89□□□□□ -0.83
HDAC9-228ENST00000524023 CEP192Q8TEP8 1941 aa9.89□□□□□ -0.83
HDAC9-228ENST00000524023 WIPF3A6NGB9 483 aa9.88□□□□□ -0.83
HDAC9-228ENST00000524023 NPIPB13A6NJU9 1138 aa9.88□□□□□ -0.83
HDAC9-228ENST00000524023 A8MXK9 166 aa9.88□□□□□ -0.83
HDAC9-228ENST00000524023 NPIPB4C9JG80 1138 aa9.88□□□□□ -0.83
HDAC9-228ENST00000524023 CD8AP01732 235 aa9.88□□□□□ -0.83
HDAC9-228ENST00000524023 NAGAP17050 411 aa9.88□□□□□ -0.83
HDAC9-228ENST00000524023 CSNK1EP49674 416 aaKnown RBP9.88□□□□□ -0.83
HDAC9-228ENST00000524023 MMP16P51512 607 aa9.88□□□□□ -0.83
HDAC9-228ENST00000524023 CAPZA1P52907 286 aa9.88□□□□□ -0.83
HDAC9-228ENST00000524023 HSF1Q00613 529 aa9.88□□□□□ -0.83
HDAC9-228ENST00000524023 TLE3Q04726 772 aa9.88□□□□□ -0.83
HDAC9-228ENST00000524023 C17orf67Q0P5P2 114 aa9.88□□□□□ -0.83
HDAC9-228ENST00000524023 TUSC1Q2TAM9 212 aa9.88□□□□□ -0.83
HDAC9-228ENST00000524023 ZNF260Q3ZCT1 412 aa9.88□□□□□ -0.83
HDAC9-228ENST00000524023 SCGB2B2Q4G0G5 96 aa9.88□□□□□ -0.83
HDAC9-228ENST00000524023 PAPD4Q6PIY7 484 aaKnown RBP9.88□□□□□ -0.83
HDAC9-228ENST00000524023 ARSKQ6UWY0 536 aa9.88□□□□□ -0.83
HDAC9-228ENST00000524023 ZNF813Q6ZN06 617 aa9.88□□□□□ -0.83
HDAC9-228ENST00000524023 COX15Q7KZN9 410 aa9.88□□□□□ -0.83
HDAC9-228ENST00000524023 ZNF584Q8IVC4 421 aa9.88□□□□□ -0.83
HDAC9-228ENST00000524023 APCDD1LQ8NCL9 501 aa9.88□□□□□ -0.83
HDAC9-228ENST00000524023 OR4S1Q8NGB4 309 aa9.88□□□□□ -0.83
HDAC9-228ENST00000524023 OR5M9Q8NGP3 310 aa9.88□□□□□ -0.83
HDAC9-228ENST00000524023 AQP3Q92482 292 aa9.88□□□□□ -0.83
HDAC9-228ENST00000524023 FGGYQ96C11 551 aa9.88□□□□□ -0.83
HDAC9-228ENST00000524023 PPA2Q9H2U2 334 aa9.88□□□□□ -0.83
HDAC9-228ENST00000524023 CNTD2Q9H8S5 307 aa9.88□□□□□ -0.83
HDAC9-228ENST00000524023 CHST11Q9NPF2 352 aa9.88□□□□□ -0.83
HDAC9-228ENST00000524023 SLC22A11Q9NSA0 550 aa9.88□□□□□ -0.83
HDAC9-228ENST00000524023 FGF21Q9NSA1 209 aa9.88□□□□□ -0.83
HDAC9-228ENST00000524023 ZNF230Q9UIE0 474 aaPredicted RBP9.88□□□□□ -0.83
HDAC9-228ENST00000524023 FBXL2Q9UKC9 423 aa9.88□□□□□ -0.83
HDAC9-228ENST00000524023 FBXO4Q9UKT5 387 aa9.88□□□□□ -0.83
HDAC9-228ENST00000524023 RAB22AQ9UL26 194 aa9.88□□□□□ -0.83
HDAC9-228ENST00000524023 VDAC3Q9Y277 283 aa9.88□□□□□ -0.83
HDAC9-228ENST00000524023 ADAMTS20P59510 1910 aa9.88□□□□□ -0.83
HDAC9-228ENST00000524023 A0A1B0GTI1 187 aa9.88□□□□□ -0.83
HDAC9-228ENST00000524023 METTL21EPA6NDL7 271 aa9.88□□□□□ -0.83
HDAC9-228ENST00000524023 RAB27BO00194 218 aa9.88□□□□□ -0.83
HDAC9-228ENST00000524023 EIF1AYO14602 144 aaKnown RBP9.88□□□□□ -0.83
HDAC9-228ENST00000524023 HOXD4P09016 255 aaPredicted RBP9.88□□□□□ -0.83
HDAC9-228ENST00000524023 SRFP11831 508 aa9.88□□□□□ -0.83
HDAC9-228ENST00000524023 MYF5P13349 255 aa9.88□□□□□ -0.83
HDAC9-228ENST00000524023 BDKRB2P30411 391 aa9.88□□□□□ -0.83
HDAC9-228ENST00000524023 NUP62P37198 522 aaPredicted RBP9.88□□□□□ -0.83
HDAC9-228ENST00000524023 MEF2DQ14814 521 aa9.88□□□□□ -0.83
HDAC9-228ENST00000524023 COL19A1Q14993 1142 aa9.88□□□□□ -0.83
HDAC9-228ENST00000524023 PHF19Q5T6S3 580 aa9.88□□□□□ -0.83
HDAC9-228ENST00000524023 RAB12Q6IQ22 244 aa9.88□□□□□ -0.83
HDAC9-228ENST00000524023 C17orf107Q6ZR85 190 aa9.88□□□□□ -0.83
HDAC9-228ENST00000524023 OVCH2Q7RTZ1 564 aa9.88□□□□□ -0.83
HDAC9-228ENST00000524023 ZNF546Q86UE3 836 aa9.88□□□□□ -0.83
HDAC9-228ENST00000524023 BEST3Q8N1M1 668 aa9.88□□□□□ -0.83
HDAC9-228ENST00000524023 PAQR4Q8N4S7 273 aaPredicted RBP9.88□□□□□ -0.83
HDAC9-228ENST00000524023 OR5M8Q8NGP6 311 aa9.88□□□□□ -0.83
HDAC9-228ENST00000524023 OR1S1Q8NH92 325 aa9.88□□□□□ -0.83
HDAC9-228ENST00000524023 STT3BQ8TCJ2 826 aa9.88□□□□□ -0.83
HDAC9-228ENST00000524023 THAP3Q8WTV1 239 aaPredicted RBP9.88□□□□□ -0.83
HDAC9-228ENST00000524023 NKD1Q969G9 470 aa9.88□□□□□ -0.83
HDAC9-228ENST00000524023 PMEPA1Q969W9 287 aa9.88□□□□□ -0.83
HDAC9-228ENST00000524023 MESP1Q9BRJ9 268 aa9.88□□□□□ -0.83
HDAC9-228ENST00000524023 FAM206AQ9NX38 181 aa9.88□□□□□ -0.83
HDAC9-228ENST00000524023 CABIN1Q9Y6J0 2220 aa9.88□□□□□ -0.83
HDAC9-228ENST00000524023 WDR87Q6ZQQ6 2873 aa9.87□□□□□ -0.83
HDAC9-228ENST00000524023 CPED1A4D0V7 1026 aa9.87□□□□□ -0.83
HDAC9-228ENST00000524023 OR14I1A6ND48 311 aa9.87□□□□□ -0.83
HDAC9-228ENST00000524023 DISC1C4P0D8 188 aa9.87□□□□□ -0.83
HDAC9-228ENST00000524023 KRBOX1C9JBD0 128 aa9.87□□□□□ -0.83
HDAC9-228ENST00000524023 ZNF208O43345 1280 aa9.87□□□□□ -0.83
HDAC9-228ENST00000524023 SPDEFO95238 335 aa9.87□□□□□ -0.83
HDAC9-228ENST00000524023 TTRP02766 147 aa9.87□□□□□ -0.83
HDAC9-228ENST00000524023 CSN2P05814 226 aa9.87□□□□□ -0.83
HDAC9-228ENST00000524023 FGF2P09038 288 aa9.87□□□□□ -0.83
HDAC9-228ENST00000524023 HSD11B1P28845 292 aa9.87□□□□□ -0.83
HDAC9-228ENST00000524023 CD34P28906 385 aa9.87□□□□□ -0.83
HDAC9-228ENST00000524023 SUMO3P55854 103 aaPredicted RBP9.87□□□□□ -0.83
HDAC9-228ENST00000524023 TAGLNQ01995 201 aaKnown RBP9.87□□□□□ -0.83
HDAC9-228ENST00000524023 SRSF4Q08170 494 aaKnown RBP9.87□□□□□ -0.83
HDAC9-228ENST00000524023 UNC119Q13432 240 aa9.87□□□□□ -0.83
HDAC9-228ENST00000524023 NKPD1Q17RQ9 610 aa9.87□□□□□ -0.83
HDAC9-228ENST00000524023 PXDC1Q5TGL8 231 aa9.87□□□□□ -0.83
HDAC9-228ENST00000524023 CD163Q86VB7 1156 aa9.87□□□□□ -0.83
HDAC9-228ENST00000524023 FJX1Q86VR8 437 aa9.87□□□□□ -0.83
HDAC9-228ENST00000524023 PDZD9Q8IXQ8 264 aa9.87□□□□□ -0.83
HDAC9-228ENST00000524023 C11orf40Q8WZ69 217 aa9.87□□□□□ -0.83
HDAC9-228ENST00000524023 DDIT4LQ96D03 193 aa9.87□□□□□ -0.83
HDAC9-228ENST00000524023 SLAMF6Q96DU3 332 aa9.87□□□□□ -0.83
HDAC9-228ENST00000524023 C5orf34Q96MH7 638 aa9.87□□□□□ -0.83
HDAC9-228ENST00000524023 TGIF2Q9GZN2 237 aa9.87□□□□□ -0.83
HDAC9-228ENST00000524023 PCED1AQ9H1Q7 454 aa9.87□□□□□ -0.83
HDAC9-228ENST00000524023 SLC2A8Q9NY64 477 aa9.87□□□□□ -0.83
HDAC9-228ENST00000524023 VSIG4Q9Y279 399 aa9.87□□□□□ -0.83
HDAC9-228ENST00000524023 SDK1Q7Z5N4 2213 aa9.87□□□□□ -0.83
HDAC9-228ENST00000524023 OR5H14A6NHG9 310 aa9.87□□□□□ -0.83
HDAC9-228ENST00000524023 LIPT2A6NK58 231 aa9.87□□□□□ -0.83
HDAC9-228ENST00000524023 SHISA8B8ZZ34 492 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms