RNA–Protein interactions for RNA: ENST00000523912.5

CTNNA1-240, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-240ENST00000523912 ECH1Q13011 328 aa7.5□□□□□ -1.21
CTNNA1-240ENST00000523912 TMEM155Q4W5P6 130 aa7.5□□□□□ -1.21
CTNNA1-240ENST00000523912 ARMCX4Q5H9R4 360 aa7.5□□□□□ -1.21
CTNNA1-240ENST00000523912 LEG1Q6P5S2 330 aa7.5□□□□□ -1.21
CTNNA1-240ENST00000523912 C16orf89Q6UX73 402 aa7.5□□□□□ -1.21
CTNNA1-240ENST00000523912 CPLX4Q7Z7G2 160 aa7.5□□□□□ -1.21
CTNNA1-240ENST00000523912 ZNF283Q8N7M2 679 aa7.5□□□□□ -1.21
CTNNA1-240ENST00000523912 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.5□□□□□ -1.21
CTNNA1-240ENST00000523912 ATG16L2Q8NAA4 619 aa7.5□□□□□ -1.21
CTNNA1-240ENST00000523912 SEMA6DQ8NFY4 1073 aa7.5□□□□□ -1.21
CTNNA1-240ENST00000523912 OR52L1Q8NGH7 329 aa7.5□□□□□ -1.21
CTNNA1-240ENST00000523912 HAVCR1Q96D42 359 aa7.5□□□□□ -1.21
CTNNA1-240ENST00000523912 PYURFQ96I23 114 aa7.5□□□□□ -1.21
CTNNA1-240ENST00000523912 DHRS1Q96LJ7 313 aa7.5□□□□□ -1.21
CTNNA1-240ENST00000523912 ZNF582Q96NG8 517 aaPredicted RBP7.5□□□□□ -1.21
CTNNA1-240ENST00000523912 ERMAPQ96PL5 475 aaPredicted RBP7.5□□□□□ -1.21
CTNNA1-240ENST00000523912 CDADC1Q9BWV3 514 aa7.5□□□□□ -1.21
CTNNA1-240ENST00000523912 HCAR1Q9BXC0 346 aa7.5□□□□□ -1.21
CTNNA1-240ENST00000523912 NUAK2Q9H093 628 aa7.5□□□□□ -1.21
CTNNA1-240ENST00000523912 MYLK2Q9H1R3 596 aa7.5□□□□□ -1.21
CTNNA1-240ENST00000523912 GORASP2Q9H8Y8 452 aa7.5□□□□□ -1.21
CTNNA1-240ENST00000523912 PTTG3PQ9NZH4 202 aa7.5□□□□□ -1.21
CTNNA1-240ENST00000523912 IL19Q9UHD0 177 aa7.5□□□□□ -1.21
CTNNA1-240ENST00000523912 IL20RAQ9UHF4 553 aa7.5□□□□□ -1.21
CTNNA1-240ENST00000523912 PPP1R3CQ9UQK1 317 aa7.5□□□□□ -1.21
CTNNA1-240ENST00000523912 ARPC3O15145 178 aa7.49□□□□□ -1.21
CTNNA1-240ENST00000523912 RER1O15258 196 aa7.49□□□□□ -1.21
CTNNA1-240ENST00000523912 SPRY1O43609 319 aaPredicted RBP7.49□□□□□ -1.21
CTNNA1-240ENST00000523912 IDH3BO43837 385 aa7.49□□□□□ -1.21
CTNNA1-240ENST00000523912 SNX3O60493 162 aa7.49□□□□□ -1.21
CTNNA1-240ENST00000523912 RGS9O75916 674 aaPredicted RBP7.49□□□□□ -1.21
CTNNA1-240ENST00000523912 DIRAS1O95057 198 aa7.49□□□□□ -1.21
CTNNA1-240ENST00000523912 VENTXO95231 258 aa7.49□□□□□ -1.21
CTNNA1-240ENST00000523912 IGHV2-70P01814 119 aa7.49□□□□□ -1.21
CTNNA1-240ENST00000523912 HLA-DQA2P01906 255 aa7.49□□□□□ -1.21
CTNNA1-240ENST00000523912 SCG5P05408 212 aa7.49□□□□□ -1.21
CTNNA1-240ENST00000523912 HSD17B1P14061 328 aa7.49□□□□□ -1.21
CTNNA1-240ENST00000523912 IRF2P14316 349 aa7.49□□□□□ -1.21
CTNNA1-240ENST00000523912 COMPP49747 757 aaPredicted RBP7.49□□□□□ -1.21
CTNNA1-240ENST00000523912 MMP16P51512 607 aa7.49□□□□□ -1.21
CTNNA1-240ENST00000523912 MNAT1P51948 309 aa7.49□□□□□ -1.21
CTNNA1-240ENST00000523912 MXRA7P84157 204 aa7.49□□□□□ -1.21
CTNNA1-240ENST00000523912 MALLQ13021 153 aa7.49□□□□□ -1.21
CTNNA1-240ENST00000523912 SEC23BQ15437 767 aa7.49□□□□□ -1.21
CTNNA1-240ENST00000523912 KCNMB1Q16558 191 aa7.49□□□□□ -1.21
CTNNA1-240ENST00000523912 RFX4Q33E94 735 aa7.49□□□□□ -1.21
CTNNA1-240ENST00000523912 SPATS1Q496A3 300 aa7.49□□□□□ -1.21
CTNNA1-240ENST00000523912 ESCO2Q56NI9 601 aa7.49□□□□□ -1.21
CTNNA1-240ENST00000523912 TMEM255AQ5JRV8 349 aa7.49□□□□□ -1.21
CTNNA1-240ENST00000523912 RPL13AP3Q6NVV1 102 aa7.49□□□□□ -1.21
CTNNA1-240ENST00000523912 FBXW12Q6X9E4 464 aa7.49□□□□□ -1.21
CTNNA1-240ENST00000523912 PTCHD4Q6ZW05 846 aa7.49□□□□□ -1.21
CTNNA1-240ENST00000523912 C1orf87Q8N0U7 546 aa7.49□□□□□ -1.21
CTNNA1-240ENST00000523912 PGAM4Q8N0Y7 254 aa7.49□□□□□ -1.21
CTNNA1-240ENST00000523912 RNF148Q8N7C7 305 aa7.49□□□□□ -1.21
CTNNA1-240ENST00000523912 OR4C15Q8NGM1 316 aa7.49□□□□□ -1.21
CTNNA1-240ENST00000523912 OR2AJ1Q8NGZ0 328 aa7.49□□□□□ -1.21
CTNNA1-240ENST00000523912 OR13G1Q8NGZ3 307 aa7.49□□□□□ -1.21
CTNNA1-240ENST00000523912 SGMS2Q8NHU3 365 aa7.49□□□□□ -1.21
CTNNA1-240ENST00000523912 ITLN1Q8WWA0 313 aa7.49□□□□□ -1.21
CTNNA1-240ENST00000523912 GCDHQ92947 438 aaPredicted RBP7.49□□□□□ -1.21
CTNNA1-240ENST00000523912 POP5Q969H6 163 aaKnown RBP7.49□□□□□ -1.21
CTNNA1-240ENST00000523912 C7orf34Q96L11 122 aa7.49□□□□□ -1.21
CTNNA1-240ENST00000523912 OR2V2Q96R30 315 aa7.49□□□□□ -1.21
CTNNA1-240ENST00000523912 PITX2Q99697 317 aa7.49□□□□□ -1.21
CTNNA1-240ENST00000523912 MRI1Q9BV20 369 aa7.49□□□□□ -1.21
CTNNA1-240ENST00000523912 TMPRSS13Q9BYE2 586 aa7.49□□□□□ -1.21
CTNNA1-240ENST00000523912 OR52D1Q9H346 318 aa7.49□□□□□ -1.21
CTNNA1-240ENST00000523912 NTN4Q9HB63 628 aa7.49□□□□□ -1.21
CTNNA1-240ENST00000523912 KCNG2Q9UJ96 466 aa7.49□□□□□ -1.21
CTNNA1-240ENST00000523912 KLHL21Q9UJP4 597 aa7.49□□□□□ -1.21
CTNNA1-240ENST00000523912 STARD10Q9Y365 291 aa7.49□□□□□ -1.21
CTNNA1-240ENST00000523912 NOP16Q9Y3C1 178 aaKnown RBP7.49□□□□□ -1.21
CTNNA1-240ENST00000523912 ARPC2O15144 300 aa7.48□□□□□ -1.21
CTNNA1-240ENST00000523912 WIPF1O43516 503 aa7.48□□□□□ -1.21
CTNNA1-240ENST00000523912 DCTN3O75935 186 aa7.48□□□□□ -1.21
CTNNA1-240ENST00000523912 KRT36O76013 467 aa7.48□□□□□ -1.21
CTNNA1-240ENST00000523912 FAM107AO95990 144 aa7.48□□□□□ -1.21
CTNNA1-240ENST00000523912 ADRA2CP18825 462 aa7.48□□□□□ -1.21
CTNNA1-240ENST00000523912 CFPP27918 469 aa7.48□□□□□ -1.21
CTNNA1-240ENST00000523912 CDKN2AP42771 156 aaKnown RBP7.48□□□□□ -1.21
CTNNA1-240ENST00000523912 RAD23AP54725 363 aa7.48□□□□□ -1.21
CTNNA1-240ENST00000523912 COX10Q12887 443 aa7.48□□□□□ -1.21
CTNNA1-240ENST00000523912 CCDC92Q53HC0 331 aaPredicted RBP7.48□□□□□ -1.21
CTNNA1-240ENST00000523912 OR2T2Q6IF00 324 aa7.48□□□□□ -1.21
CTNNA1-240ENST00000523912 BTNL3Q6UXE8 466 aa7.48□□□□□ -1.21
CTNNA1-240ENST00000523912 NLRC3Q7RTR2 1065 aa7.48□□□□□ -1.21
CTNNA1-240ENST00000523912 TSEN54Q7Z6J9 526 aaKnown RBP7.48□□□□□ -1.21
CTNNA1-240ENST00000523912 OR5AS1Q8N127 324 aa7.48□□□□□ -1.21
CTNNA1-240ENST00000523912 LINC00471Q8N535 108 aa7.48□□□□□ -1.21
CTNNA1-240ENST00000523912 FAM86B1Q8N7N1 296 aa7.48□□□□□ -1.21
CTNNA1-240ENST00000523912 OR8G5Q8NG78 346 aa7.48□□□□□ -1.21
CTNNA1-240ENST00000523912 OR10AD1Q8NGE0 317 aa7.48□□□□□ -1.21
CTNNA1-240ENST00000523912 OR4K13Q8NH42 304 aa7.48□□□□□ -1.21
CTNNA1-240ENST00000523912 GNPDA2Q8TDQ7 276 aa7.48□□□□□ -1.21
CTNNA1-240ENST00000523912 FAM216AQ8WUB2 273 aa7.48□□□□□ -1.21
CTNNA1-240ENST00000523912 SLC7A6Q92536 515 aa7.48□□□□□ -1.21
CTNNA1-240ENST00000523912 SPTSSAQ969W0 71 aa7.48□□□□□ -1.21
CTNNA1-240ENST00000523912 NMNAT3Q96T66 252 aa7.48□□□□□ -1.21
CTNNA1-240ENST00000523912 SLC6A7Q99884 636 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms