RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 KRTAP27-1Q3LI81 207 aa15.23■□□□□ 0.03
CLK4-211ENST00000522556 MBNL2Q5VZF2 373 aaKnown RBP15.23■□□□□ 0.03
CLK4-211ENST00000522556 BBS1Q8NFJ9 593 aa15.23■□□□□ 0.03
CLK4-211ENST00000522556 GJC3Q8NFK1 279 aa15.23■□□□□ 0.03
CLK4-211ENST00000522556 OR6K6Q8NGW6 343 aa15.23■□□□□ 0.03
CLK4-211ENST00000522556 OR5K1Q8NHB7 308 aa15.23■□□□□ 0.03
CLK4-211ENST00000522556 UBASH3BQ8TF42 649 aa15.23■□□□□ 0.03
CLK4-211ENST00000522556 PYDC1Q8WXC3 89 aa15.23■□□□□ 0.03
CLK4-211ENST00000522556 PTP4A1Q93096 173 aa15.23■□□□□ 0.03
CLK4-211ENST00000522556 PITX2Q99697 317 aa15.23■□□□□ 0.03
CLK4-211ENST00000522556 SEMA6AQ9H2E6 1030 aa15.23■□□□□ 0.03
CLK4-211ENST00000522556 MS4A5Q9H3V2 200 aa15.23■□□□□ 0.03
CLK4-211ENST00000522556 HINT3Q9NQE9 182 aaKnown RBP15.23■□□□□ 0.03
CLK4-211ENST00000522556 AP4S1Q9Y587 144 aa15.23■□□□□ 0.03
CLK4-211ENST00000522556 NF1P21359 2839 aa15.22■□□□□ 0.03
CLK4-211ENST00000522556 LOC390937A0A1W2PQ73 354 aa15.22■□□□□ 0.03
CLK4-211ENST00000522556 SURF4O15260 269 aa15.22■□□□□ 0.03
CLK4-211ENST00000522556 CIB2O75838 187 aa15.22■□□□□ 0.03
CLK4-211ENST00000522556 SPARCP09486 303 aa15.22■□□□□ 0.03
CLK4-211ENST00000522556 SLC25A16P16260 332 aa15.22■□□□□ 0.03
CLK4-211ENST00000522556 ZNF3P17036 446 aa15.22■□□□□ 0.03
CLK4-211ENST00000522556 HOXB4P17483 251 aaPredicted RBP15.22■□□□□ 0.03
CLK4-211ENST00000522556 GCH1P30793 250 aa15.22■□□□□ 0.03
CLK4-211ENST00000522556 PSG7Q13046 419 aa15.22■□□□□ 0.03
CLK4-211ENST00000522556 ZNF718Q3SXZ3 478 aa15.22■□□□□ 0.03
CLK4-211ENST00000522556 SLC27A4Q6P1M0 643 aa15.22■□□□□ 0.03
CLK4-211ENST00000522556 PLBD1Q6P4A8 553 aa15.22■□□□□ 0.03
CLK4-211ENST00000522556 ZNF786Q8N393 782 aa15.22■□□□□ 0.03
CLK4-211ENST00000522556 OTULINQ96BN8 352 aa15.22■□□□□ 0.03
CLK4-211ENST00000522556 COQ7Q99807 217 aa15.22■□□□□ 0.03
CLK4-211ENST00000522556 PIMREGQ9BSJ6 248 aa15.22■□□□□ 0.03
CLK4-211ENST00000522556 SOX7Q9BT81 388 aa15.22■□□□□ 0.03
CLK4-211ENST00000522556 HDHD2Q9H0R4 259 aa15.22■□□□□ 0.03
CLK4-211ENST00000522556 ELOVL3Q9HB03 270 aa15.22■□□□□ 0.03
CLK4-211ENST00000522556 MSL2Q9HCI7 577 aa15.22■□□□□ 0.03
CLK4-211ENST00000522556 TBCCD1Q9NVR7 557 aa15.22■□□□□ 0.03
CLK4-211ENST00000522556 PTTG3PQ9NZH4 202 aa15.22■□□□□ 0.03
CLK4-211ENST00000522556 KIF17Q9P2E2 1029 aa15.22■□□□□ 0.03
CLK4-211ENST00000522556 CACNG2Q9Y698 323 aa15.22■□□□□ 0.03
CLK4-211ENST00000522556 NSD1Q96L73 2696 aaPredicted RBP15.22■□□□□ 0.03
CLK4-211ENST00000522556 SETD2Q9BYW2 2564 aaPredicted RBP15.22■□□□□ 0.03
CLK4-211ENST00000522556 C2CD3Q4AC94 2353 aa15.21■□□□□ 0.03
CLK4-211ENST00000522556 LRP5LA4QPB2 252 aa15.21■□□□□ 0.03
CLK4-211ENST00000522556 INAFM1C9JVW0 142 aa15.21■□□□□ 0.03
CLK4-211ENST00000522556 H3BNX3 289 aa15.21■□□□□ 0.03
CLK4-211ENST00000522556 SPRY3O43610 288 aa15.21■□□□□ 0.03
CLK4-211ENST00000522556 CDC14BO60729 498 aa15.21■□□□□ 0.03
CLK4-211ENST00000522556 IFNGP01579 166 aa15.21■□□□□ 0.03
CLK4-211ENST00000522556 IGHV1-46P01743 117 aa15.21■□□□□ 0.03
CLK4-211ENST00000522556 ACSM4P0C7M7 580 aa15.21■□□□□ 0.03
CLK4-211ENST00000522556 IL2RGP31785 369 aa15.21■□□□□ 0.03
CLK4-211ENST00000522556 LOXL1Q08397 574 aaPredicted RBP15.21■□□□□ 0.03
CLK4-211ENST00000522556 RIN1Q13671 783 aa15.21■□□□□ 0.03
CLK4-211ENST00000522556 TSTQ16762 297 aaKnown RBP15.21■□□□□ 0.03
CLK4-211ENST00000522556 TMEM249Q2WGJ8 235 aa15.21■□□□□ 0.03
CLK4-211ENST00000522556 SPATC1Q76KD6 591 aa15.21■□□□□ 0.03
CLK4-211ENST00000522556 DCXRQ7Z4W1 244 aa15.21■□□□□ 0.03
CLK4-211ENST00000522556 OR2AJ1Q8NGZ0 328 aa15.21■□□□□ 0.03
CLK4-211ENST00000522556 NRBF2Q96F24 287 aa15.21■□□□□ 0.03
CLK4-211ENST00000522556 ATF6BQ99941 703 aa15.21■□□□□ 0.03
CLK4-211ENST00000522556 CDADC1Q9BWV3 514 aa15.21■□□□□ 0.03
CLK4-211ENST00000522556 OR51V1Q9H2C8 321 aa15.21■□□□□ 0.03
CLK4-211ENST00000522556 ZNF556Q9HAH1 456 aa15.21■□□□□ 0.03
CLK4-211ENST00000522556 SLC25A19Q9HC21 320 aa15.21■□□□□ 0.03
CLK4-211ENST00000522556 PAPOLBQ9NRJ5 636 aaKnown RBP15.21■□□□□ 0.03
CLK4-211ENST00000522556 SLCO1C1Q9NYB5 712 aa15.21■□□□□ 0.03
CLK4-211ENST00000522556 ATPIF1Q9UII2 106 aa15.21■□□□□ 0.03
CLK4-211ENST00000522556 FBXO9Q9UK97 447 aaPredicted RBP15.21■□□□□ 0.03
CLK4-211ENST00000522556 TANC2Q9HCD6 1990 aa15.21■□□□□ 0.03
CLK4-211ENST00000522556 F5H5K5 113 aa15.2■□□□□ 0.02
CLK4-211ENST00000522556 WNT9BO14905 357 aa15.2■□□□□ 0.02
CLK4-211ENST00000522556 LILRA1O75019 489 aa15.2■□□□□ 0.02
CLK4-211ENST00000522556 RP2O75695 350 aa15.2■□□□□ 0.02
CLK4-211ENST00000522556 ZNF823P16415 610 aa15.2■□□□□ 0.02
CLK4-211ENST00000522556 ZNF23P17027 643 aa15.2■□□□□ 0.02
CLK4-211ENST00000522556 USF1P22415 310 aaPredicted RBP15.2■□□□□ 0.02
CLK4-211ENST00000522556 FASP25445 335 aa15.2■□□□□ 0.02
CLK4-211ENST00000522556 GIFP27352 417 aa15.2■□□□□ 0.02
CLK4-211ENST00000522556 FMO3P31513 532 aa15.2■□□□□ 0.02
CLK4-211ENST00000522556 ENTPD1P49961 510 aa15.2■□□□□ 0.02
CLK4-211ENST00000522556 ARHGDIAP52565 204 aa15.2■□□□□ 0.02
CLK4-211ENST00000522556 SELENOVP59797 346 aa15.2■□□□□ 0.02
CLK4-211ENST00000522556 Q6ZR03 302 aa15.2■□□□□ 0.02
CLK4-211ENST00000522556 SNX33Q8WV41 574 aa15.2■□□□□ 0.02
CLK4-211ENST00000522556 CMBLQ96DG6 245 aa15.2■□□□□ 0.02
CLK4-211ENST00000522556 ZMYND19Q96E35 227 aaPredicted RBP15.2■□□□□ 0.02
CLK4-211ENST00000522556 AMELYQ99218 206 aa15.2■□□□□ 0.02
CLK4-211ENST00000522556 MYOZ1Q9NP98 299 aaPredicted RBP15.2■□□□□ 0.02
CLK4-211ENST00000522556 KCNG2Q9UJ96 466 aa15.2■□□□□ 0.02
CLK4-211ENST00000522556 PURGQ9UJV8 347 aaKnown RBP15.2■□□□□ 0.02
CLK4-211ENST00000522556 SAC3D1A6NKF1 404 aa15.19■□□□□ 0.02
CLK4-211ENST00000522556 NDUFS8O00217 210 aa15.19■□□□□ 0.02
CLK4-211ENST00000522556 ZNF593O00488 134 aaPredicted RBP15.19■□□□□ 0.02
CLK4-211ENST00000522556 SELENOFO60613 162 aa15.19■□□□□ 0.02
CLK4-211ENST00000522556 ERCC1P07992 297 aaPredicted RBP15.19■□□□□ 0.02
CLK4-211ENST00000522556 IGHV4-31P0DP07 118 aa15.19■□□□□ 0.02
CLK4-211ENST00000522556 ZNF16P17020 682 aaPredicted RBP15.19■□□□□ 0.02
CLK4-211ENST00000522556 ZNF81P51508 661 aa15.19■□□□□ 0.02
CLK4-211ENST00000522556 CRISP1P54107 249 aa15.19■□□□□ 0.02
CLK4-211ENST00000522556 ACTR3P61158 418 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms