RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 RPRD1BQ9NQG5 326 aaKnown RBP17.5■□□□□ 0.39
SDCBP-209ENST00000522243 TUBG2Q9NRH3 451 aa17.5■□□□□ 0.39
SDCBP-209ENST00000522243 TMCC3Q9ULS5 477 aa17.5■□□□□ 0.39
SDCBP-209ENST00000522243 NPTNQ9Y639 398 aa17.5■□□□□ 0.39
SDCBP-209ENST00000522243 VENTXO95231 258 aa17.49■□□□□ 0.39
SDCBP-209ENST00000522243 TNFSF4P23510 183 aa17.49■□□□□ 0.39
SDCBP-209ENST00000522243 FPR3P25089 353 aa17.49■□□□□ 0.39
SDCBP-209ENST00000522243 NOS3P29474 1203 aa17.49■□□□□ 0.39
SDCBP-209ENST00000522243 C16orf89Q6UX73 402 aa17.49■□□□□ 0.39
SDCBP-209ENST00000522243 PIGWQ7Z7B1 504 aa17.49■□□□□ 0.39
SDCBP-209ENST00000522243 LINC00346Q8IVM7 164 aa17.49■□□□□ 0.39
SDCBP-209ENST00000522243 ZDHHC21Q8IVQ6 265 aa17.49■□□□□ 0.39
SDCBP-209ENST00000522243 GJC3Q8NFK1 279 aa17.49■□□□□ 0.39
SDCBP-209ENST00000522243 GNPDA2Q8TDQ7 276 aa17.49■□□□□ 0.39
SDCBP-209ENST00000522243 TMPRSS13Q9BYE2 586 aa17.49■□□□□ 0.39
SDCBP-209ENST00000522243 IL1RAPQ9NPH3 570 aa17.49■□□□□ 0.39
SDCBP-209ENST00000522243 TMEM106BQ9NUM4 274 aa17.49■□□□□ 0.39
SDCBP-209ENST00000522243 A0A0G2JMP0 313 aa17.48■□□□□ 0.39
SDCBP-209ENST00000522243 A0A0X1KG70 313 aa17.48■□□□□ 0.39
SDCBP-209ENST00000522243 ARPC3O15145 178 aa17.48■□□□□ 0.39
SDCBP-209ENST00000522243 ADRA2CP18825 462 aa17.48■□□□□ 0.39
SDCBP-209ENST00000522243 GSSP48637 474 aa17.48■□□□□ 0.39
SDCBP-209ENST00000522243 HIST1H3AP68431 136 aa17.48■□□□□ 0.39
SDCBP-209ENST00000522243 LCN2P80188 198 aa17.48■□□□□ 0.39
SDCBP-209ENST00000522243 SLC35F1Q5T1Q4 408 aa17.48■□□□□ 0.39
SDCBP-209ENST00000522243 HIST2H3PS2Q5TEC6 136 aa17.48■□□□□ 0.39
SDCBP-209ENST00000522243 DCAF12L2Q5VW00 463 aa17.48■□□□□ 0.39
SDCBP-209ENST00000522243 OR2T2Q6IF00 324 aa17.48■□□□□ 0.39
SDCBP-209ENST00000522243 CYP2R1Q6VVX0 501 aa17.48■□□□□ 0.39
SDCBP-209ENST00000522243 HIST2H3AQ71DI3 136 aa17.48■□□□□ 0.39
SDCBP-209ENST00000522243 ATG16L2Q8NAA4 619 aa17.48■□□□□ 0.39
SDCBP-209ENST00000522243 SDR9C7Q8NEX9 313 aa17.48■□□□□ 0.39
SDCBP-209ENST00000522243 OR4M2Q8NGB6 313 aa17.48■□□□□ 0.39
SDCBP-209ENST00000522243 COG8Q96MW5 612 aa17.48■□□□□ 0.39
SDCBP-209ENST00000522243 OR6C68A6NDL8 312 aa17.47■□□□□ 0.39
SDCBP-209ENST00000522243 DCTN3O75935 186 aa17.47■□□□□ 0.39
SDCBP-209ENST00000522243 IGHV2-70P01814 119 aa17.47■□□□□ 0.39
SDCBP-209ENST00000522243 RAC2P15153 192 aa17.47■□□□□ 0.39
SDCBP-209ENST00000522243 TNFRSF1AP19438 455 aa17.47■□□□□ 0.39
SDCBP-209ENST00000522243 IFNGR2P38484 337 aa17.47■□□□□ 0.39
SDCBP-209ENST00000522243 PRSS12P56730 875 aa17.47■□□□□ 0.39
SDCBP-209ENST00000522243 PGBD2Q6P3X8 592 aa17.47■□□□□ 0.39
SDCBP-209ENST00000522243 PGM2L1Q6PCE3 622 aa17.47■□□□□ 0.39
SDCBP-209ENST00000522243 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.47■□□□□ 0.39
SDCBP-209ENST00000522243 SLC26A10Q8NG04 563 aa17.47■□□□□ 0.39
SDCBP-209ENST00000522243 OR52E2Q8NGJ4 325 aa17.47■□□□□ 0.39
SDCBP-209ENST00000522243 OR5L1Q8NGL2 311 aa17.47■□□□□ 0.39
SDCBP-209ENST00000522243 ST7LQ8TDW4 575 aa17.47■□□□□ 0.39
SDCBP-209ENST00000522243 OR2V2Q96R30 315 aa17.47■□□□□ 0.39
SDCBP-209ENST00000522243 COQ7Q99807 217 aa17.47■□□□□ 0.39
SDCBP-209ENST00000522243 HDHD2Q9H0R4 259 aa17.47■□□□□ 0.39
SDCBP-209ENST00000522243 EGLN3Q9H6Z9 239 aa17.47■□□□□ 0.39
SDCBP-209ENST00000522243 WDR76Q9H967 626 aa17.47■□□□□ 0.39
SDCBP-209ENST00000522243 PCDHB10Q9UN67 800 aa17.47■□□□□ 0.39
SDCBP-209ENST00000522243 HLA-DQA2P01906 255 aa17.46■□□□□ 0.39
SDCBP-209ENST00000522243 EPHA1P21709 976 aa17.46■□□□□ 0.39
SDCBP-209ENST00000522243 RGS6P49758 472 aa17.46■□□□□ 0.39
SDCBP-209ENST00000522243 COX10Q12887 443 aa17.46■□□□□ 0.39
SDCBP-209ENST00000522243 TSPAN31Q12999 210 aa17.46■□□□□ 0.39
SDCBP-209ENST00000522243 CLEC12AQ5QGZ9 265 aa17.46■□□□□ 0.39
SDCBP-209ENST00000522243 ZNF620Q6ZNG0 422 aa17.46■□□□□ 0.39
SDCBP-209ENST00000522243 CFAP77Q6ZQR2 320 aa17.46■□□□□ 0.39
SDCBP-209ENST00000522243 ZNF283Q8N7M2 679 aa17.46■□□□□ 0.39
SDCBP-209ENST00000522243 OR10AD1Q8NGE0 317 aa17.46■□□□□ 0.39
SDCBP-209ENST00000522243 OR9Q2Q8NGE9 314 aa17.46■□□□□ 0.39
SDCBP-209ENST00000522243 APOBEC3DQ96AK3 386 aaPredicted RBP17.46■□□□□ 0.39
SDCBP-209ENST00000522243 NDE1Q9NXR1 346 aa17.46■□□□□ 0.39
SDCBP-209ENST00000522243 IL19Q9UHD0 177 aa17.46■□□□□ 0.39
SDCBP-209ENST00000522243 ATPIF1Q9UII2 106 aa17.46■□□□□ 0.39
SDCBP-209ENST00000522243 PPP1R3CQ9UQK1 317 aa17.46■□□□□ 0.39
SDCBP-209ENST00000522243 H0YL77 283 aa17.45■□□□□ 0.38
SDCBP-209ENST00000522243 ATP6V1B2P21281 511 aa17.45■□□□□ 0.38
SDCBP-209ENST00000522243 ZFP36P26651 326 aaKnown RBP17.45■□□□□ 0.38
SDCBP-209ENST00000522243 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.45■□□□□ 0.38
SDCBP-209ENST00000522243 RSPO1Q2MKA7 263 aaPredicted RBP17.45■□□□□ 0.38
SDCBP-209ENST00000522243 SLC18B1Q6NT16 456 aa17.45■□□□□ 0.38
SDCBP-209ENST00000522243 FBXW12Q6X9E4 464 aa17.45■□□□□ 0.38
SDCBP-209ENST00000522243 ZBTB46Q86UZ6 589 aa17.45■□□□□ 0.38
SDCBP-209ENST00000522243 OR2AJ1Q8NGZ0 328 aa17.45■□□□□ 0.38
SDCBP-209ENST00000522243 SIGLEC11Q96RL6 698 aa17.45■□□□□ 0.38
SDCBP-209ENST00000522243 PITX2Q99697 317 aa17.45■□□□□ 0.38
SDCBP-209ENST00000522243 CDADC1Q9BWV3 514 aa17.45■□□□□ 0.38
SDCBP-209ENST00000522243 C7orf69Q9H7B7 122 aa17.45■□□□□ 0.38
SDCBP-209ENST00000522243 IGHV3-64DA0A0J9YX35 117 aa17.44■□□□□ 0.38
SDCBP-209ENST00000522243 F5H5K5 113 aa17.44■□□□□ 0.38
SDCBP-209ENST00000522243 J3QW42 95 aa17.44■□□□□ 0.38
SDCBP-209ENST00000522243 TNFRSF11BO00300 401 aa17.44■□□□□ 0.38
SDCBP-209ENST00000522243 SURF4O15260 269 aa17.44■□□□□ 0.38
SDCBP-209ENST00000522243 PYCR1P32322 319 aa17.44■□□□□ 0.38
SDCBP-209ENST00000522243 PPP1R8Q12972 351 aaKnown RBP17.44■□□□□ 0.38
SDCBP-209ENST00000522243 SLC36A3Q495N2 470 aa17.44■□□□□ 0.38
SDCBP-209ENST00000522243 C1QL2Q7Z5L3 287 aa17.44■□□□□ 0.38
SDCBP-209ENST00000522243 NAA40Q86UY6 237 aa17.44■□□□□ 0.38
SDCBP-209ENST00000522243 BHLHE23Q8NDY6 225 aa17.44■□□□□ 0.38
SDCBP-209ENST00000522243 SEMA6DQ8NFY4 1073 aa17.44■□□□□ 0.38
SDCBP-209ENST00000522243 OR8G5Q8NG78 346 aa17.44■□□□□ 0.38
SDCBP-209ENST00000522243 ZNF420Q8TAQ5 688 aaPredicted RBP17.44■□□□□ 0.38
SDCBP-209ENST00000522243 ZNF418Q8TF45 676 aaPredicted RBP17.44■□□□□ 0.38
SDCBP-209ENST00000522243 BTBD10Q9BSF8 475 aa17.44■□□□□ 0.38
SDCBP-209ENST00000522243 MRPL22Q9NWU5 206 aaKnown RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms