RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 GALNT8Q9NY28 637 aa11.42□□□□□ -0.58
CPNE3-205ENST00000522240 PLEK2Q9NYT0 353 aa11.42□□□□□ -0.58
CPNE3-205ENST00000522240 JKAMPQ9P055 326 aa11.42□□□□□ -0.58
CPNE3-205ENST00000522240 NDUFA13Q9P0J0 144 aa11.42□□□□□ -0.58
CPNE3-205ENST00000522240 TIMM10BQ9Y5J6 103 aa11.42□□□□□ -0.58
CPNE3-205ENST00000522240 RP1L1Q8IWN7 2480 aaPredicted RBP11.42□□□□□ -0.58
CPNE3-205ENST00000522240 A0A096LPE4 126 aa11.41□□□□□ -0.58
CPNE3-205ENST00000522240 A0A1B0GUH1 482 aa11.41□□□□□ -0.58
CPNE3-205ENST00000522240 SMIM31A0A1B0GVY4 71 aa11.41□□□□□ -0.58
CPNE3-205ENST00000522240 A0A1W2PPZ6 126 aa11.41□□□□□ -0.58
CPNE3-205ENST00000522240 CIB4A0PJX0 185 aa11.41□□□□□ -0.58
CPNE3-205ENST00000522240 A8MXE2 369 aa11.41□□□□□ -0.58
CPNE3-205ENST00000522240 EEF1E1-BLOC1S5C9J1V9 151 aa11.41□□□□□ -0.58
CPNE3-205ENST00000522240 CCRL2O00421 344 aa11.41□□□□□ -0.58
CPNE3-205ENST00000522240 CCL21O00585 134 aa11.41□□□□□ -0.58
CPNE3-205ENST00000522240 EEF1E1O43324 174 aaKnown RBP11.41□□□□□ -0.58
CPNE3-205ENST00000522240 DOK2O60496 412 aa11.41□□□□□ -0.58
CPNE3-205ENST00000522240 ICMTO60725 284 aa11.41□□□□□ -0.58
CPNE3-205ENST00000522240 RAD51DO75771 328 aa11.41□□□□□ -0.58
CPNE3-205ENST00000522240 LYZL6O75951 148 aa11.41□□□□□ -0.58
CPNE3-205ENST00000522240 CD1AP06126 327 aa11.41□□□□□ -0.58
CPNE3-205ENST00000522240 COX5BP10606 129 aa11.41□□□□□ -0.58
CPNE3-205ENST00000522240 CD53P19397 219 aa11.41□□□□□ -0.58
CPNE3-205ENST00000522240 HOXC12P31275 282 aa11.41□□□□□ -0.58
CPNE3-205ENST00000522240 OTX1P32242 354 aaPredicted RBP11.41□□□□□ -0.58
CPNE3-205ENST00000522240 ARR3P36575 388 aa11.41□□□□□ -0.58
CPNE3-205ENST00000522240 TGFBR2P37173 567 aa11.41□□□□□ -0.58
CPNE3-205ENST00000522240 PSMA6P60900 246 aaKnown RBP11.41□□□□□ -0.58
CPNE3-205ENST00000522240 TLE1Q04724 770 aa11.41□□□□□ -0.58
CPNE3-205ENST00000522240 ECH1Q13011 328 aa11.41□□□□□ -0.58
CPNE3-205ENST00000522240 GPR50Q13585 617 aa11.41□□□□□ -0.58
CPNE3-205ENST00000522240 CDK5R1Q15078 307 aa11.41□□□□□ -0.58
CPNE3-205ENST00000522240 TSTQ16762 297 aaKnown RBP11.41□□□□□ -0.58
CPNE3-205ENST00000522240 ZNF829Q3KNS6 432 aaPredicted RBP11.41□□□□□ -0.58
CPNE3-205ENST00000522240 CCDC92Q53HC0 331 aaPredicted RBP11.41□□□□□ -0.58
CPNE3-205ENST00000522240 SFRP5Q5T4F7 317 aa11.41□□□□□ -0.58
CPNE3-205ENST00000522240 ZNF544Q6NX49 715 aa11.41□□□□□ -0.58
CPNE3-205ENST00000522240 TMEM53Q6P2H8 277 aa11.41□□□□□ -0.58
CPNE3-205ENST00000522240 FDX2Q6P4F2 183 aa11.41□□□□□ -0.58
CPNE3-205ENST00000522240 ZNF474Q6S9Z5 364 aaPredicted RBP11.41□□□□□ -0.58
CPNE3-205ENST00000522240 SATL1Q86VE3 508 aa11.41□□□□□ -0.58
CPNE3-205ENST00000522240 CXorf67Q86X51 503 aaPredicted RBP11.41□□□□□ -0.58
CPNE3-205ENST00000522240 YIPF6Q96EC8 236 aa11.41□□□□□ -0.58
CPNE3-205ENST00000522240 ATF6BQ99941 703 aa11.41□□□□□ -0.58
CPNE3-205ENST00000522240 OR2H1Q9GZK4 316 aa11.41□□□□□ -0.58
CPNE3-205ENST00000522240 WNT5BQ9H1J7 359 aa11.41□□□□□ -0.58
CPNE3-205ENST00000522240 OR10A4Q9H209 315 aa11.41□□□□□ -0.58
CPNE3-205ENST00000522240 CENPMQ9NSP4 180 aa11.41□□□□□ -0.58
CPNE3-205ENST00000522240 NDUFB11Q9NX14 153 aa11.41□□□□□ -0.58
CPNE3-205ENST00000522240 ST6GALNAC2Q9UJ37 374 aa11.41□□□□□ -0.58
CPNE3-205ENST00000522240 OR6C6A6NF89 314 aa11.4□□□□□ -0.58
CPNE3-205ENST00000522240 PYCARD-AS1I3L0S3 204 aa11.4□□□□□ -0.58
CPNE3-205ENST00000522240 PSMD9O00233 223 aa11.4□□□□□ -0.58
CPNE3-205ENST00000522240 MAGEB4O15481 346 aaPredicted RBP11.4□□□□□ -0.58
CPNE3-205ENST00000522240 OGG1O15527 345 aa11.4□□□□□ -0.58
CPNE3-205ENST00000522240 PLPP2O43688 288 aa11.4□□□□□ -0.58
CPNE3-205ENST00000522240 SYNGR3O43761 229 aa11.4□□□□□ -0.58
CPNE3-205ENST00000522240 SRSF10O75494 262 aaKnown RBP11.4□□□□□ -0.58
CPNE3-205ENST00000522240 APOC1P02654 83 aa11.4□□□□□ -0.58
CPNE3-205ENST00000522240 PAX7P23759 505 aa11.4□□□□□ -0.58
CPNE3-205ENST00000522240 HSD11B1P28845 292 aa11.4□□□□□ -0.58
CPNE3-205ENST00000522240 CHRNB4P30926 498 aa11.4□□□□□ -0.58
CPNE3-205ENST00000522240 LIPAP38571 399 aa11.4□□□□□ -0.58
CPNE3-205ENST00000522240 RGS6P49758 472 aa11.4□□□□□ -0.58
CPNE3-205ENST00000522240 UBE2NP61088 152 aaKnown RBP11.4□□□□□ -0.58
CPNE3-205ENST00000522240 PSG4Q00888 419 aa11.4□□□□□ -0.58
CPNE3-205ENST00000522240 SRSF1Q07955 248 aaKnown RBP eCLIP11.4□□□□□ -0.58
CPNE3-205ENST00000522240 SSX1Q16384 188 aa11.4□□□□□ -0.58
CPNE3-205ENST00000522240 SLC25A35Q3KQZ1 300 aa11.4□□□□□ -0.58
CPNE3-205ENST00000522240 HIKESHIQ53FT3 197 aa11.4□□□□□ -0.58
CPNE3-205ENST00000522240 DMKNQ6E0U4 476 aaPredicted RBP11.4□□□□□ -0.58
CPNE3-205ENST00000522240 RPL22L1Q6P5R6 122 aaKnown RBP11.4□□□□□ -0.58
CPNE3-205ENST00000522240 BHLHA15Q7RTS1 189 aaPredicted RBP11.4□□□□□ -0.58
CPNE3-205ENST00000522240 LUZP2Q86TE4 346 aa11.4□□□□□ -0.58
CPNE3-205ENST00000522240 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.4□□□□□ -0.58
CPNE3-205ENST00000522240 PHC2Q8IXK0 858 aa11.4□□□□□ -0.58
CPNE3-205ENST00000522240 ASB5Q8WWX0 329 aa11.4□□□□□ -0.58
CPNE3-205ENST00000522240 TMIGD2Q96BF3 282 aa11.4□□□□□ -0.58
CPNE3-205ENST00000522240 SMIM19Q96E16 107 aa11.4□□□□□ -0.58
CPNE3-205ENST00000522240 KCNJ15Q99712 375 aa11.4□□□□□ -0.58
CPNE3-205ENST00000522240 HDHD5Q9BXW7 423 aa11.4□□□□□ -0.58
CPNE3-205ENST00000522240 RBM38Q9H0Z9 239 aaKnown RBP11.4□□□□□ -0.58
CPNE3-205ENST00000522240 MOV10Q9HCE1 1003 aaKnown RBP11.4□□□□□ -0.58
CPNE3-205ENST00000522240 SLC17A5Q9NRA2 495 aa11.4□□□□□ -0.58
CPNE3-205ENST00000522240 B3GNT2Q9NY97 397 aa11.4□□□□□ -0.58
CPNE3-205ENST00000522240 ELOVL5Q9NYP7 299 aa11.4□□□□□ -0.58
CPNE3-205ENST00000522240 FBXL3Q9UKT7 428 aa11.4□□□□□ -0.58
CPNE3-205ENST00000522240 SLC5A6Q9Y289 635 aa11.4□□□□□ -0.58
CPNE3-205ENST00000522240 AMDHD2Q9Y303 409 aa11.4□□□□□ -0.58
CPNE3-205ENST00000522240 GRIP1Q9Y3R0 1128 aa11.4□□□□□ -0.58
CPNE3-205ENST00000522240 R4GMQ9 66 aa11.4□□□□□ -0.58
CPNE3-205ENST00000522240 NCOA6Q14686 2063 aaPredicted RBP11.4□□□□□ -0.58
CPNE3-205ENST00000522240 SPTBN1Q01082 2364 aaKnown RBP11.4□□□□□ -0.58
CPNE3-205ENST00000522240 DPPA5A6NC42 116 aa11.39□□□□□ -0.59
CPNE3-205ENST00000522240 OR5H1A6NKK0 313 aa11.39□□□□□ -0.59
CPNE3-205ENST00000522240 E9PI62 339 aa11.39□□□□□ -0.59
CPNE3-205ENST00000522240 HLA-HP01893 362 aa11.39□□□□□ -0.59
CPNE3-205ENST00000522240 CD79AP11912 226 aa11.39□□□□□ -0.59
CPNE3-205ENST00000522240 CD36P16671 472 aa11.39□□□□□ -0.59
CPNE3-205ENST00000522240 CRYGSP22914 178 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms