RNA–Protein interactions for RNA: ENST00000521932.1

VPS13B-210, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 1,055 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-210ENST00000521932 TUBA1AQ71U36 451 aa7.24□□□□□ -1.25
VPS13B-210ENST00000521932 RHOUQ7L0Q8 258 aa7.24□□□□□ -1.25
VPS13B-210ENST00000521932 BCDIN3DQ7Z5W3 292 aaKnown RBP7.24□□□□□ -1.25
VPS13B-210ENST00000521932 C1QL4Q86Z23 238 aa7.24□□□□□ -1.25
VPS13B-210ENST00000521932 GID4Q8IVV7 300 aa7.24□□□□□ -1.25
VPS13B-210ENST00000521932 CPEB3Q8NE35 698 aaKnown RBP7.24□□□□□ -1.25
VPS13B-210ENST00000521932 GJC3Q8NFK1 279 aa7.24□□□□□ -1.25
VPS13B-210ENST00000521932 IL17RDQ8NFM7 739 aa7.24□□□□□ -1.25
VPS13B-210ENST00000521932 OR6K6Q8NGW6 343 aa7.24□□□□□ -1.25
VPS13B-210ENST00000521932 RFKQ969G6 155 aa7.24□□□□□ -1.25
VPS13B-210ENST00000521932 OTULINQ96BN8 352 aa7.24□□□□□ -1.25
VPS13B-210ENST00000521932 ZNF582Q96NG8 517 aaPredicted RBP7.24□□□□□ -1.25
VPS13B-210ENST00000521932 APOL4Q9BPW4 351 aa7.24□□□□□ -1.25
VPS13B-210ENST00000521932 CDADC1Q9BWV3 514 aa7.24□□□□□ -1.25
VPS13B-210ENST00000521932 C1QTNF6Q9BXI9 259 aa7.24□□□□□ -1.25
VPS13B-210ENST00000521932 OR2H1Q9GZK4 316 aa7.24□□□□□ -1.25
VPS13B-210ENST00000521932 ESRP2Q9H6T0 727 aaKnown RBP7.24□□□□□ -1.25
VPS13B-210ENST00000521932 RNF121Q9H920 327 aa7.24□□□□□ -1.25
VPS13B-210ENST00000521932 WDR76Q9H967 626 aa7.24□□□□□ -1.25
VPS13B-210ENST00000521932 NOX3Q9HBY0 568 aa7.24□□□□□ -1.25
VPS13B-210ENST00000521932 EMC7Q9NPA0 242 aa7.24□□□□□ -1.25
VPS13B-210ENST00000521932 CCNB1IP1Q9NPC3 277 aa7.24□□□□□ -1.25
VPS13B-210ENST00000521932 IMPAD1Q9NX62 359 aa7.24□□□□□ -1.25
VPS13B-210ENST00000521932 WARS2Q9UGM6 360 aaKnown RBP7.24□□□□□ -1.25
VPS13B-210ENST00000521932 LHFPL6Q9Y693 200 aa7.24□□□□□ -1.25
VPS13B-210ENST00000521932 COMMD3-BMI1R4GMX3 469 aa7.24□□□□□ -1.25
VPS13B-210ENST00000521932 LRRK2Q5S007 2527 aa7.23□□□□□ -1.25
VPS13B-210ENST00000521932 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.23□□□□□ -1.25
VPS13B-210ENST00000521932 TVP23AA6NH52 213 aa7.23□□□□□ -1.25
VPS13B-210ENST00000521932 RER1O15258 196 aa7.23□□□□□ -1.25
VPS13B-210ENST00000521932 TMCC2O75069 709 aa7.23□□□□□ -1.25
VPS13B-210ENST00000521932 CTAG2O75638 210 aa7.23□□□□□ -1.25
VPS13B-210ENST00000521932 RAB36O95755 333 aa7.23□□□□□ -1.25
VPS13B-210ENST00000521932 CLIC3O95833 236 aa7.23□□□□□ -1.25
VPS13B-210ENST00000521932 CD3EP07766 207 aa7.23□□□□□ -1.25
VPS13B-210ENST00000521932 GNAO1P09471 354 aa7.23□□□□□ -1.25
VPS13B-210ENST00000521932 ZNF35P13682 527 aa7.23□□□□□ -1.25
VPS13B-210ENST00000521932 CD40P25942 277 aa7.23□□□□□ -1.25
VPS13B-210ENST00000521932 HTR1FP30939 366 aa7.23□□□□□ -1.25
VPS13B-210ENST00000521932 HSPA13P48723 471 aa7.23□□□□□ -1.25
VPS13B-210ENST00000521932 ENTPD1P49961 510 aa7.23□□□□□ -1.25
VPS13B-210ENST00000521932 ZNF83P51522 516 aa7.23□□□□□ -1.25
VPS13B-210ENST00000521932 ADAM8P78325 824 aa7.23□□□□□ -1.25
VPS13B-210ENST00000521932 PLP2Q04941 152 aa7.23□□□□□ -1.25
VPS13B-210ENST00000521932 BSPH1Q075Z2 132 aa7.23□□□□□ -1.25
VPS13B-210ENST00000521932 SCRN3Q0VDG4 424 aa7.23□□□□□ -1.25
VPS13B-210ENST00000521932 CCDC92Q53HC0 331 aaPredicted RBP7.23□□□□□ -1.25
VPS13B-210ENST00000521932 PABPC1L2AQ5JQF8 200 aa7.23□□□□□ -1.25
VPS13B-210ENST00000521932 OTPQ5XKR4 325 aa7.23□□□□□ -1.25
VPS13B-210ENST00000521932 SLC18B1Q6NT16 456 aa7.23□□□□□ -1.25
VPS13B-210ENST00000521932 IZUMO2Q6UXV1 221 aa7.23□□□□□ -1.25
VPS13B-210ENST00000521932 B3GLCTQ6Y288 498 aa7.23□□□□□ -1.25
VPS13B-210ENST00000521932 SHFQ7M4L6 423 aa7.23□□□□□ -1.25
VPS13B-210ENST00000521932 SETD9Q8NE22 299 aa7.23□□□□□ -1.25
VPS13B-210ENST00000521932 OR10H5Q8NGA6 315 aa7.23□□□□□ -1.25
VPS13B-210ENST00000521932 APH1BQ8WW43 257 aa7.23□□□□□ -1.25
VPS13B-210ENST00000521932 CYGBQ8WWM9 190 aa7.23□□□□□ -1.25
VPS13B-210ENST00000521932 ZMYND19Q96E35 227 aaPredicted RBP7.23□□□□□ -1.25
VPS13B-210ENST00000521932 RADILQ96JH8 1075 aa7.23□□□□□ -1.25
VPS13B-210ENST00000521932 Q96MT0 163 aa7.23□□□□□ -1.25
VPS13B-210ENST00000521932 TMEM204Q9BSN7 226 aa7.23□□□□□ -1.25
VPS13B-210ENST00000521932 WNT5BQ9H1J7 359 aa7.23□□□□□ -1.25
VPS13B-210ENST00000521932 C1orf198Q9H425 327 aa7.23□□□□□ -1.25
VPS13B-210ENST00000521932 RASSF1Q9NS23 344 aa7.23□□□□□ -1.25
VPS13B-210ENST00000521932 MRPS18AQ9NVS2 196 aaKnown RBP7.23□□□□□ -1.25
VPS13B-210ENST00000521932 ASH2LQ9UBL3 628 aa7.23□□□□□ -1.25
VPS13B-210ENST00000521932 ATPIF1Q9UII2 106 aa7.23□□□□□ -1.25
VPS13B-210ENST00000521932 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.23□□□□□ -1.25
VPS13B-210ENST00000521932 USP9YO00507 2555 aaPredicted RBP7.23□□□□□ -1.25
VPS13B-210ENST00000521932 ICE1Q9Y2F5 2266 aa7.22□□□□□ -1.25
VPS13B-210ENST00000521932 UTP20O75691 2785 aaKnown RBP7.22□□□□□ -1.25
VPS13B-210ENST00000521932 IQCMA0A1B0GVH7 501 aa7.22□□□□□ -1.25
VPS13B-210ENST00000521932 OR6C6A6NF89 314 aa7.22□□□□□ -1.25
VPS13B-210ENST00000521932 SNTNA6NMZ2 147 aa7.22□□□□□ -1.25
VPS13B-210ENST00000521932 M0R1B8 84 aa7.22□□□□□ -1.25
VPS13B-210ENST00000521932 SYNGR3O43761 229 aa7.22□□□□□ -1.25
VPS13B-210ENST00000521932 ENTPD6O75354 484 aa7.22□□□□□ -1.25
VPS13B-210ENST00000521932 WBP4O75554 376 aaKnown RBP7.22□□□□□ -1.25
VPS13B-210ENST00000521932 CELA3BP08861 270 aa7.22□□□□□ -1.25
VPS13B-210ENST00000521932 SBK2P0C263 348 aa7.22□□□□□ -1.25
VPS13B-210ENST00000521932 CECR9P0C854 216 aa7.22□□□□□ -1.25
VPS13B-210ENST00000521932 PSKH1P11801 424 aa7.22□□□□□ -1.25
VPS13B-210ENST00000521932 STOMP27105 288 aa7.22□□□□□ -1.25
VPS13B-210ENST00000521932 RPS27P42677 84 aaKnown RBP7.22□□□□□ -1.25
VPS13B-210ENST00000521932 CDH11P55287 796 aa7.22□□□□□ -1.25
VPS13B-210ENST00000521932 RPS7P62081 194 aaKnown RBP7.22□□□□□ -1.25
VPS13B-210ENST00000521932 NAAAQ02083 359 aa7.22□□□□□ -1.25
VPS13B-210ENST00000521932 RAB39AQ14964 217 aa7.22□□□□□ -1.25
VPS13B-210ENST00000521932 MAD2L1BPQ15013 274 aaPredicted RBP7.22□□□□□ -1.25
VPS13B-210ENST00000521932 SNCBQ16143 134 aa7.22□□□□□ -1.25
VPS13B-210ENST00000521932 RSPO1Q2MKA7 263 aaPredicted RBP7.22□□□□□ -1.25
VPS13B-210ENST00000521932 ELFN2Q5R3F8 820 aa7.22□□□□□ -1.25
VPS13B-210ENST00000521932 C6orf52Q5T4I8 152 aa7.22□□□□□ -1.25
VPS13B-210ENST00000521932 LCN1P1Q5VSP4 162 aa7.22□□□□□ -1.25
VPS13B-210ENST00000521932 ADAM5Q6NVV9 412 aa7.22□□□□□ -1.25
VPS13B-210ENST00000521932 CORO6Q6QEF8 472 aa7.22□□□□□ -1.25
VPS13B-210ENST00000521932 SLC16A9Q7RTY1 509 aa7.22□□□□□ -1.25
VPS13B-210ENST00000521932 DPY19L4Q7Z388 723 aa7.22□□□□□ -1.25
VPS13B-210ENST00000521932 MYPOPQ86VE0 399 aaPredicted RBP7.22□□□□□ -1.25
VPS13B-210ENST00000521932 CDC20BQ86Y33 519 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms