RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 SSX5O60225 188 aa11.54□□□□□ -0.56
TRAPPC9-208ENST00000520857 MPZL1O95297 269 aa11.54□□□□□ -0.56
TRAPPC9-208ENST00000520857 ABHD16AO95870 558 aa11.54□□□□□ -0.56
TRAPPC9-208ENST00000520857 CD8AP01732 235 aa11.54□□□□□ -0.56
TRAPPC9-208ENST00000520857 SLC25A4P12235 298 aa11.54□□□□□ -0.56
TRAPPC9-208ENST00000520857 ST6GAL1P15907 406 aa11.54□□□□□ -0.56
TRAPPC9-208ENST00000520857 IL12BP29460 328 aa11.54□□□□□ -0.56
TRAPPC9-208ENST00000520857 PNLIPRP2P54317 469 aa11.54□□□□□ -0.56
TRAPPC9-208ENST00000520857 CLDN6P56747 220 aa11.54□□□□□ -0.56
TRAPPC9-208ENST00000520857 EIF5AP63241 154 aaKnown RBP11.54□□□□□ -0.56
TRAPPC9-208ENST00000520857 ACKR1Q16570 336 aa11.54□□□□□ -0.56
TRAPPC9-208ENST00000520857 ETV3LQ6ZN32 361 aa11.54□□□□□ -0.56
TRAPPC9-208ENST00000520857 PEG10Q86TG7 708 aaKnown RBP11.54□□□□□ -0.56
TRAPPC9-208ENST00000520857 ZNF440Q8IYI8 595 aa11.54□□□□□ -0.56
TRAPPC9-208ENST00000520857 AVL9Q8NBF6 648 aa11.54□□□□□ -0.56
TRAPPC9-208ENST00000520857 TAAR8Q969N4 342 aa11.54□□□□□ -0.56
TRAPPC9-208ENST00000520857 ABHD6Q9BV23 337 aa11.54□□□□□ -0.56
TRAPPC9-208ENST00000520857 BARX1Q9HBU1 254 aaPredicted RBP11.54□□□□□ -0.56
TRAPPC9-208ENST00000520857 UBQLN4Q9NRR5 601 aa11.54□□□□□ -0.56
TRAPPC9-208ENST00000520857 DHCR7Q9UBM7 475 aaKnown RBP11.54□□□□□ -0.56
TRAPPC9-208ENST00000520857 URB1O60287 2271 aaKnown RBP11.54□□□□□ -0.56
TRAPPC9-208ENST00000520857 CTSEP14091 401 aa11.54□□□□□ -0.56
TRAPPC9-208ENST00000520857 EMP2P54851 167 aa11.54□□□□□ -0.56
TRAPPC9-208ENST00000520857 SSBP1Q04837 148 aaKnown RBP11.54□□□□□ -0.56
TRAPPC9-208ENST00000520857 MGAT2Q10469 447 aa11.54□□□□□ -0.56
TRAPPC9-208ENST00000520857 TSC22D1Q15714 1073 aa11.54□□□□□ -0.56
TRAPPC9-208ENST00000520857 CHRDL2Q6WN34 429 aa11.54□□□□□ -0.56
TRAPPC9-208ENST00000520857 ST6GALNAC5Q9BVH7 336 aa11.54□□□□□ -0.56
TRAPPC9-208ENST00000520857 FAM117AQ9C073 453 aa11.54□□□□□ -0.56
TRAPPC9-208ENST00000520857 COA3Q9Y2R0 106 aaPredicted RBP11.54□□□□□ -0.56
TRAPPC9-208ENST00000520857 KCNK7Q9Y2U2 307 aa11.54□□□□□ -0.56
TRAPPC9-208ENST00000520857 A0A1W2PPC1 479 aa11.53□□□□□ -0.56
TRAPPC9-208ENST00000520857 RNASEK-C17orf49H0YIS7 233 aa11.53□□□□□ -0.56
TRAPPC9-208ENST00000520857 CTSBP07858 339 aa11.53□□□□□ -0.56
TRAPPC9-208ENST00000520857 HNRNPA1P09651 372 aaKnown RBP eCLIP11.53□□□□□ -0.56
TRAPPC9-208ENST00000520857 DAOP14920 347 aa11.53□□□□□ -0.56
TRAPPC9-208ENST00000520857 MUC1P15941 1255 aaPredicted RBP11.53□□□□□ -0.56
TRAPPC9-208ENST00000520857 SCAND1P57086 179 aa11.53□□□□□ -0.56
TRAPPC9-208ENST00000520857 S100A12P80511 92 aa11.53□□□□□ -0.56
TRAPPC9-208ENST00000520857 ZNF684Q5T5D7 378 aa11.53□□□□□ -0.56
TRAPPC9-208ENST00000520857 TANGO2Q6ICL3 276 aa11.53□□□□□ -0.56
TRAPPC9-208ENST00000520857 SPRED2Q7Z698 418 aa11.53□□□□□ -0.56
TRAPPC9-208ENST00000520857 ASB5Q8WWX0 329 aa11.53□□□□□ -0.56
TRAPPC9-208ENST00000520857 MCHR2Q969V1 340 aa11.53□□□□□ -0.56
TRAPPC9-208ENST00000520857 HHIPL1Q96JK4 782 aa11.53□□□□□ -0.56
TRAPPC9-208ENST00000520857 RSRP1Q9BUV0 290 aa11.53□□□□□ -0.56
TRAPPC9-208ENST00000520857 MMP26Q9NRE1 261 aa11.53□□□□□ -0.56
TRAPPC9-208ENST00000520857 IGKV1D-42A0A075B6H8 117 aa11.53□□□□□ -0.56
TRAPPC9-208ENST00000520857 ZNF20P17024 532 aa11.53□□□□□ -0.56
TRAPPC9-208ENST00000520857 AMY2BP19961 511 aa11.53□□□□□ -0.56
TRAPPC9-208ENST00000520857 ZBTB25P24278 435 aa11.53□□□□□ -0.56
TRAPPC9-208ENST00000520857 ADH6P28332 368 aa11.53□□□□□ -0.56
TRAPPC9-208ENST00000520857 GLO1Q04760 184 aa11.53□□□□□ -0.56
TRAPPC9-208ENST00000520857 FABP9Q0Z7S8 132 aa11.53□□□□□ -0.56
TRAPPC9-208ENST00000520857 TGIF1Q15583 401 aa11.53□□□□□ -0.56
TRAPPC9-208ENST00000520857 FAM109BQ6ICB4 259 aaPredicted RBP11.53□□□□□ -0.56
TRAPPC9-208ENST00000520857 MAMDC2Q7Z304 686 aaPredicted RBP11.53□□□□□ -0.56
TRAPPC9-208ENST00000520857 SLC25A42Q86VD7 318 aa11.53□□□□□ -0.56
TRAPPC9-208ENST00000520857 COA4Q9NYJ1 87 aa11.53□□□□□ -0.56
TRAPPC9-208ENST00000520857 LRP12Q9Y561 859 aa11.53□□□□□ -0.56
TRAPPC9-208ENST00000520857 TRBV23-1A0A0A0MS06 115 aa11.53□□□□□ -0.56
TRAPPC9-208ENST00000520857 C17orf105B2RV13 164 aa11.53□□□□□ -0.56
TRAPPC9-208ENST00000520857 LMX1BO60663 402 aa11.53□□□□□ -0.56
TRAPPC9-208ENST00000520857 TSPAN15O95858 294 aa11.53□□□□□ -0.56
TRAPPC9-208ENST00000520857 EEF1A1P5Q5VTE0 462 aa11.53□□□□□ -0.56
TRAPPC9-208ENST00000520857 OR4D6Q8NGJ1 314 aa11.53□□□□□ -0.56
TRAPPC9-208ENST00000520857 MITD1Q8WV92 249 aa11.53□□□□□ -0.56
TRAPPC9-208ENST00000520857 ASB17Q8WXJ9 295 aa11.53□□□□□ -0.56
TRAPPC9-208ENST00000520857 VSTM2LQ96N03 204 aa11.53□□□□□ -0.56
TRAPPC9-208ENST00000520857 LSM5Q9Y4Y9 91 aaKnown RBP11.53□□□□□ -0.56
TRAPPC9-208ENST00000520857 SDCBPO00560 298 aaPredicted RBP11.52□□□□□ -0.56
TRAPPC9-208ENST00000520857 SYT7O43581 403 aa11.52□□□□□ -0.56
TRAPPC9-208ENST00000520857 HCKP08631 526 aa11.52□□□□□ -0.56
TRAPPC9-208ENST00000520857 GP1BBP13224 206 aa11.52□□□□□ -0.56
TRAPPC9-208ENST00000520857 NQO2P16083 231 aa11.52□□□□□ -0.56
TRAPPC9-208ENST00000520857 ABOP16442 354 aa11.52□□□□□ -0.56
TRAPPC9-208ENST00000520857 ARRB1P49407 418 aaPredicted RBP11.52□□□□□ -0.56
TRAPPC9-208ENST00000520857 DCXRQ7Z4W1 244 aa11.52□□□□□ -0.56
TRAPPC9-208ENST00000520857 CAPNS2Q96L46 248 aa11.52□□□□□ -0.56
TRAPPC9-208ENST00000520857 CLCC1Q96S66 551 aa11.52□□□□□ -0.56
TRAPPC9-208ENST00000520857 NRIP2Q9BQI9 281 aa11.52□□□□□ -0.56
TRAPPC9-208ENST00000520857 BANF2Q9H503 90 aa11.52□□□□□ -0.56
TRAPPC9-208ENST00000520857 SEC61A2Q9H9S3 476 aa11.52□□□□□ -0.56
TRAPPC9-208ENST00000520857 TAF9BQ9HBM6 251 aa11.52□□□□□ -0.56
TRAPPC9-208ENST00000520857 RP1P56715 2156 aa11.52□□□□□ -0.57
TRAPPC9-208ENST00000520857 A0A0J9YY10 115 aa11.52□□□□□ -0.57
TRAPPC9-208ENST00000520857 C17orf51A8MQB3 221 aa11.52□□□□□ -0.57
TRAPPC9-208ENST00000520857 HCRTR1O43613 425 aa11.52□□□□□ -0.57
TRAPPC9-208ENST00000520857 PTAFRP25105 342 aa11.52□□□□□ -0.57
TRAPPC9-208ENST00000520857 ID4P47928 161 aa11.52□□□□□ -0.57
TRAPPC9-208ENST00000520857 ZNF141Q15928 474 aa11.52□□□□□ -0.57
TRAPPC9-208ENST00000520857 DHRS7BQ6IAN0 325 aaPredicted RBP11.52□□□□□ -0.57
TRAPPC9-208ENST00000520857 NPRL2Q8WTW4 380 aa11.52□□□□□ -0.57
TRAPPC9-208ENST00000520857 MAFIPQ8WZ33 124 aa11.52□□□□□ -0.57
TRAPPC9-208ENST00000520857 OR52A1Q9UKL2 312 aa11.52□□□□□ -0.57
TRAPPC9-208ENST00000520857 B4DGG1 531 aa11.51□□□□□ -0.57
TRAPPC9-208ENST00000520857 ZNF878C9JN71 531 aa11.51□□□□□ -0.57
TRAPPC9-208ENST00000520857 TIMP1P01033 207 aa11.51□□□□□ -0.57
TRAPPC9-208ENST00000520857 ACAA1P09110 424 aaPredicted RBP11.51□□□□□ -0.57
TRAPPC9-208ENST00000520857 CTLA4P16410 223 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms