RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 OR52L1Q8NGH7 329 aa13.66□□□□□ -0.22
IGHV3-42-201ENST00000520410 PTP4A1Q93096 173 aa13.66□□□□□ -0.22
IGHV3-42-201ENST00000520410 SAMD8Q96LT4 415 aa13.66□□□□□ -0.22
IGHV3-42-201ENST00000520410 OR2V2Q96R30 315 aa13.66□□□□□ -0.22
IGHV3-42-201ENST00000520410 PITX2Q99697 317 aa13.66□□□□□ -0.22
IGHV3-42-201ENST00000520410 GORASP2Q9H8Y8 452 aa13.66□□□□□ -0.22
IGHV3-42-201ENST00000520410 WDR76Q9H967 626 aa13.66□□□□□ -0.22
IGHV3-42-201ENST00000520410 G6PC2Q9NQR9 355 aa13.66□□□□□ -0.22
IGHV3-42-201ENST00000520410 TAGLN3Q9UI15 199 aa13.66□□□□□ -0.22
IGHV3-42-201ENST00000520410 PPP1R3CQ9UQK1 317 aa13.66□□□□□ -0.22
IGHV3-42-201ENST00000520410 ATRQ13535 2644 aa13.65□□□□□ -0.22
IGHV3-42-201ENST00000520410 ATP8B1O43520 1251 aa13.65□□□□□ -0.22
IGHV3-42-201ENST00000520410 ICMTO60725 284 aa13.65□□□□□ -0.22
IGHV3-42-201ENST00000520410 FOXH1O75593 365 aa13.65□□□□□ -0.22
IGHV3-42-201ENST00000520410 CD55P08174 381 aa13.65□□□□□ -0.22
IGHV3-42-201ENST00000520410 TUBG1P23258 451 aa13.65□□□□□ -0.22
IGHV3-42-201ENST00000520410 FXYD6P3P58550 94 aa13.65□□□□□ -0.22
IGHV3-42-201ENST00000520410 DBPQ10586 325 aaPredicted RBP13.65□□□□□ -0.22
IGHV3-42-201ENST00000520410 CDK5R2Q13319 367 aa13.65□□□□□ -0.22
IGHV3-42-201ENST00000520410 RFX4Q33E94 735 aa13.65□□□□□ -0.22
IGHV3-42-201ENST00000520410 CLEC12AQ5QGZ9 265 aa13.65□□□□□ -0.22
IGHV3-42-201ENST00000520410 SLC35F1Q5T1Q4 408 aa13.65□□□□□ -0.22
IGHV3-42-201ENST00000520410 ZDHHC21Q8IVQ6 265 aa13.65□□□□□ -0.22
IGHV3-42-201ENST00000520410 DEFB107AQ8IZN7 70 aa13.65□□□□□ -0.22
IGHV3-42-201ENST00000520410 NANPQ8TBE9 248 aa13.65□□□□□ -0.22
IGHV3-42-201ENST00000520410 GNPDA2Q8TDQ7 276 aa13.65□□□□□ -0.22
IGHV3-42-201ENST00000520410 ZNF582Q96NG8 517 aaPredicted RBP13.65□□□□□ -0.22
IGHV3-42-201ENST00000520410 GPA33Q99795 319 aa13.65□□□□□ -0.22
IGHV3-42-201ENST00000520410 TMPRSS13Q9BYE2 586 aa13.65□□□□□ -0.22
IGHV3-42-201ENST00000520410 HDHD2Q9H0R4 259 aa13.65□□□□□ -0.22
IGHV3-42-201ENST00000520410 TUBG2Q9NRH3 451 aa13.65□□□□□ -0.22
IGHV3-42-201ENST00000520410 NDE1Q9NXR1 346 aa13.65□□□□□ -0.22
IGHV3-42-201ENST00000520410 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.65□□□□□ -0.22
IGHV3-42-201ENST00000520410 F5H5K5 113 aa13.64□□□□□ -0.23
IGHV3-42-201ENST00000520410 J3QLI3 93 aa13.64□□□□□ -0.23
IGHV3-42-201ENST00000520410 DCTN3O75935 186 aa13.64□□□□□ -0.23
IGHV3-42-201ENST00000520410 ADH4P08319 380 aa13.64□□□□□ -0.23
IGHV3-42-201ENST00000520410 HIST1H1CP16403 213 aaKnown RBP13.64□□□□□ -0.23
IGHV3-42-201ENST00000520410 KITLGP21583 273 aa13.64□□□□□ -0.23
IGHV3-42-201ENST00000520410 PRSS12P56730 875 aa13.64□□□□□ -0.23
IGHV3-42-201ENST00000520410 SLC36A3Q495N2 470 aa13.64□□□□□ -0.23
IGHV3-42-201ENST00000520410 ARMCX4Q5H9R4 360 aa13.64□□□□□ -0.23
IGHV3-42-201ENST00000520410 CYP2R1Q6VVX0 501 aa13.64□□□□□ -0.23
IGHV3-42-201ENST00000520410 Q6ZR03 302 aa13.64□□□□□ -0.23
IGHV3-42-201ENST00000520410 C1QL2Q7Z5L3 287 aa13.64□□□□□ -0.23
IGHV3-42-201ENST00000520410 OR52E2Q8NGJ4 325 aa13.64□□□□□ -0.23
IGHV3-42-201ENST00000520410 C22orf15Q8WYQ4 148 aa13.64□□□□□ -0.23
IGHV3-42-201ENST00000520410 APOBEC3DQ96AK3 386 aaPredicted RBP13.64□□□□□ -0.23
IGHV3-42-201ENST00000520410 HAVCR1Q96D42 359 aa13.64□□□□□ -0.23
IGHV3-42-201ENST00000520410 SLC6A7Q99884 636 aa13.64□□□□□ -0.23
IGHV3-42-201ENST00000520410 HCAR1Q9BXC0 346 aa13.64□□□□□ -0.23
IGHV3-42-201ENST00000520410 ARL8BQ9NVJ2 186 aa13.64□□□□□ -0.23
IGHV3-42-201ENST00000520410 IL19Q9UHD0 177 aa13.64□□□□□ -0.23
IGHV3-42-201ENST00000520410 B9D1Q9UPM9 204 aa13.64□□□□□ -0.23
IGHV3-42-201ENST00000520410 ARL2BPQ9Y2Y0 163 aa13.64□□□□□ -0.23
IGHV3-42-201ENST00000520410 LHFPL6Q9Y693 200 aa13.64□□□□□ -0.23
IGHV3-42-201ENST00000520410 COL6A5A8TX70 2615 aa13.64□□□□□ -0.23
IGHV3-42-201ENST00000520410 A0A0A6YYJ9 748 aa13.63□□□□□ -0.23
IGHV3-42-201ENST00000520410 TRIM77I1YAP6 450 aa13.63□□□□□ -0.23
IGHV3-42-201ENST00000520410 DCTN6O00399 190 aa13.63□□□□□ -0.23
IGHV3-42-201ENST00000520410 ZNF205O95201 554 aa13.63□□□□□ -0.23
IGHV3-42-201ENST00000520410 TXNDC12O95881 172 aa13.63□□□□□ -0.23
IGHV3-42-201ENST00000520410 AVPP01185 164 aa13.63□□□□□ -0.23
IGHV3-42-201ENST00000520410 IGHV2-70P01814 119 aa13.63□□□□□ -0.23
IGHV3-42-201ENST00000520410 HSD17B1P14061 328 aa13.63□□□□□ -0.23
IGHV3-42-201ENST00000520410 RAC2P15153 192 aa13.63□□□□□ -0.23
IGHV3-42-201ENST00000520410 ZNF823P16415 610 aa13.63□□□□□ -0.23
IGHV3-42-201ENST00000520410 FPR3P25089 353 aa13.63□□□□□ -0.23
IGHV3-42-201ENST00000520410 SRP9P49458 86 aaKnown RBP13.63□□□□□ -0.23
IGHV3-42-201ENST00000520410 BTG1P62324 171 aa13.63□□□□□ -0.23
IGHV3-42-201ENST00000520410 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.63□□□□□ -0.23
IGHV3-42-201ENST00000520410 MALLQ13021 153 aa13.63□□□□□ -0.23
IGHV3-42-201ENST00000520410 SLC27A4Q6P1M0 643 aa13.63□□□□□ -0.23
IGHV3-42-201ENST00000520410 PROKR2Q8NFJ6 384 aa13.63□□□□□ -0.23
IGHV3-42-201ENST00000520410 ZNF420Q8TAQ5 688 aaPredicted RBP13.63□□□□□ -0.23
IGHV3-42-201ENST00000520410 DHRS1Q96LJ7 313 aa13.63□□□□□ -0.23
IGHV3-42-201ENST00000520410 JMJD8Q96S16 334 aa13.63□□□□□ -0.23
IGHV3-42-201ENST00000520410 COQ7Q99807 217 aa13.63□□□□□ -0.23
IGHV3-42-201ENST00000520410 SUCNR1Q9BXA5 334 aa13.63□□□□□ -0.23
IGHV3-42-201ENST00000520410 EGLN3Q9H6Z9 239 aa13.63□□□□□ -0.23
IGHV3-42-201ENST00000520410 KLHL21Q9UJP4 597 aa13.63□□□□□ -0.23
IGHV3-42-201ENST00000520410 IGLV1-36A0A0B4J1U3 117 aa13.62□□□□□ -0.23
IGHV3-42-201ENST00000520410 TNFRSF11BO00300 401 aa13.62□□□□□ -0.23
IGHV3-42-201ENST00000520410 LCATP04180 440 aa13.62□□□□□ -0.23
IGHV3-42-201ENST00000520410 GATA3P23771 443 aa13.62□□□□□ -0.23
IGHV3-42-201ENST00000520410 SLC6A9P48067 706 aa13.62□□□□□ -0.23
IGHV3-42-201ENST00000520410 RAD23AP54725 363 aa13.62□□□□□ -0.23
IGHV3-42-201ENST00000520410 ESCO2Q56NI9 601 aa13.62□□□□□ -0.23
IGHV3-42-201ENST00000520410 RBMS3Q6XE24 437 aaKnown RBP13.62□□□□□ -0.23
IGHV3-42-201ENST00000520410 CFAP77Q6ZQR2 320 aa13.62□□□□□ -0.23
IGHV3-42-201ENST00000520410 C1orf229Q6ZS94 237 aaPredicted RBP13.62□□□□□ -0.23
IGHV3-42-201ENST00000520410 OR6V1Q8N148 313 aa13.62□□□□□ -0.23
IGHV3-42-201ENST00000520410 ZNF283Q8N7M2 679 aa13.62□□□□□ -0.23
IGHV3-42-201ENST00000520410 OR8G5Q8NG78 346 aa13.62□□□□□ -0.23
IGHV3-42-201ENST00000520410 OR13G1Q8NGZ3 307 aa13.62□□□□□ -0.23
IGHV3-42-201ENST00000520410 GCDHQ92947 438 aaPredicted RBP13.62□□□□□ -0.23
IGHV3-42-201ENST00000520410 ATF6BQ99941 703 aa13.62□□□□□ -0.23
IGHV3-42-201ENST00000520410 MRI1Q9BV20 369 aa13.62□□□□□ -0.23
IGHV3-42-201ENST00000520410 TBC1D23Q9NUY8 699 aa13.62□□□□□ -0.23
IGHV3-42-201ENST00000520410 OR5V1Q9UGF6 321 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms