RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 PPP1R3EQ9H7J1 279 aa12.76□□□□□ -0.37
CLN8-204ENST00000519254 G6PC2Q9NQR9 355 aa12.76□□□□□ -0.37
CLN8-204ENST00000519254 CENPMQ9NSP4 180 aa12.76□□□□□ -0.37
CLN8-204ENST00000519254 FAIMQ9NVQ4 179 aa12.76□□□□□ -0.37
CLN8-204ENST00000519254 FOXD3Q9UJU5 478 aaPredicted RBP12.76□□□□□ -0.37
CLN8-204ENST00000519254 GDF2Q9UK05 429 aaPredicted RBP12.76□□□□□ -0.37
CLN8-204ENST00000519254 EMC9Q9Y3B6 208 aa12.76□□□□□ -0.37
CLN8-204ENST00000519254 FLVCR1Q9Y5Y0 555 aa12.76□□□□□ -0.37
CLN8-204ENST00000519254 ZZEF1O43149 2961 aa12.76□□□□□ -0.37
CLN8-204ENST00000519254 OR14I1A6ND48 311 aa12.76□□□□□ -0.37
CLN8-204ENST00000519254 ANKRD61A6NGH8 418 aa12.76□□□□□ -0.37
CLN8-204ENST00000519254 H3BSH0 61 aa12.76□□□□□ -0.37
CLN8-204ENST00000519254 TGM6O95932 706 aa12.76□□□□□ -0.37
CLN8-204ENST00000519254 TPOP07202 933 aa12.76□□□□□ -0.37
CLN8-204ENST00000519254 H2BFMP0C1H6 154 aa12.76□□□□□ -0.37
CLN8-204ENST00000519254 NR2C1P13056 603 aa12.76□□□□□ -0.37
CLN8-204ENST00000519254 PSMD7P51665 324 aa12.76□□□□□ -0.37
CLN8-204ENST00000519254 MADCAM1Q13477 382 aa12.76□□□□□ -0.37
CLN8-204ENST00000519254 KRTCAP3Q53RY4 240 aa12.76□□□□□ -0.37
CLN8-204ENST00000519254 ZNF324BQ6AW86 544 aaPredicted RBP12.76□□□□□ -0.37
CLN8-204ENST00000519254 METAP1DQ6UB28 335 aaPredicted RBP12.76□□□□□ -0.37
CLN8-204ENST00000519254 STAC2Q6ZMT1 411 aa12.76□□□□□ -0.37
CLN8-204ENST00000519254 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.76□□□□□ -0.37
CLN8-204ENST00000519254 OR8H2Q8N162 312 aa12.76□□□□□ -0.37
CLN8-204ENST00000519254 MINDY2Q8NBR6 621 aa12.76□□□□□ -0.37
CLN8-204ENST00000519254 CNTNAP3BQ96NU0 1288 aa12.76□□□□□ -0.37
CLN8-204ENST00000519254 CNTNAP3Q9BZ76 1288 aa12.76□□□□□ -0.37
CLN8-204ENST00000519254 C1orf198Q9H425 327 aa12.76□□□□□ -0.37
CLN8-204ENST00000519254 ASF1BQ9NVP2 202 aa12.76□□□□□ -0.37
CLN8-204ENST00000519254 GTF2A1LQ9UNN4 478 aa12.76□□□□□ -0.37
CLN8-204ENST00000519254 SPENQ96T58 3664 aaKnown RBP12.75□□□□□ -0.37
CLN8-204ENST00000519254 A0A0B4J203 849 aa12.75□□□□□ -0.37
CLN8-204ENST00000519254 PDCD5O14737 125 aa12.75□□□□□ -0.37
CLN8-204ENST00000519254 RAF1P04049 648 aa12.75□□□□□ -0.37
CLN8-204ENST00000519254 EIF4EP06730 217 aaKnown RBP12.75□□□□□ -0.37
CLN8-204ENST00000519254 ADRA2CP18825 462 aa12.75□□□□□ -0.37
CLN8-204ENST00000519254 P2RY14Q15391 338 aa12.75□□□□□ -0.37
CLN8-204ENST00000519254 ZNF544Q6NX49 715 aa12.75□□□□□ -0.37
CLN8-204ENST00000519254 FOXL2NBQ6ZUU3 175 aa12.75□□□□□ -0.37
CLN8-204ENST00000519254 AAED1Q7RTV5 226 aa12.75□□□□□ -0.37
CLN8-204ENST00000519254 LRRTM1Q86UE6 522 aa12.75□□□□□ -0.37
CLN8-204ENST00000519254 TUSC5Q8IXB3 177 aa12.75□□□□□ -0.37
CLN8-204ENST00000519254 C20orf196Q8IYI0 205 aa12.75□□□□□ -0.37
CLN8-204ENST00000519254 SAMD12Q8N8I0 201 aa12.75□□□□□ -0.37
CLN8-204ENST00000519254 GDPD1Q8N9F7 314 aa12.75□□□□□ -0.37
CLN8-204ENST00000519254 POC5Q8NA72 575 aa12.75□□□□□ -0.37
CLN8-204ENST00000519254 OR5H6Q8NGV6 325 aa12.75□□□□□ -0.37
CLN8-204ENST00000519254 TRMT10AQ8TBZ6 339 aaKnown RBP12.75□□□□□ -0.37
CLN8-204ENST00000519254 TMEM106AQ96A25 262 aa12.75□□□□□ -0.37
CLN8-204ENST00000519254 INTS12Q96CB8 462 aaKnown RBP12.75□□□□□ -0.37
CLN8-204ENST00000519254 CALHM2Q9HA72 323 aa12.75□□□□□ -0.37
CLN8-204ENST00000519254 CYSLTR2Q9NS75 346 aa12.75□□□□□ -0.37
CLN8-204ENST00000519254 MALT1Q9UDY8 824 aa12.75□□□□□ -0.37
CLN8-204ENST00000519254 ADAM30Q9UKF2 790 aa12.75□□□□□ -0.37
CLN8-204ENST00000519254 DSPP15924 2871 aaKnown RBP12.75□□□□□ -0.37
CLN8-204ENST00000519254 RTTNQ86VV8 2226 aa12.74□□□□□ -0.37
CLN8-204ENST00000519254 TRAV8-7A0A075B6U6 113 aa12.74□□□□□ -0.37
CLN8-204ENST00000519254 TMEM269A0A1B0GVZ9 245 aa12.74□□□□□ -0.37
CLN8-204ENST00000519254 TTLL8A6PVC2 850 aa12.74□□□□□ -0.37
CLN8-204ENST00000519254 FAM25AB3EWG3 89 aa12.74□□□□□ -0.37
CLN8-204ENST00000519254 FAM25CB3EWG5 89 aa12.74□□□□□ -0.37
CLN8-204ENST00000519254 FAM25GB3EWG6 89 aa12.74□□□□□ -0.37
CLN8-204ENST00000519254 ERVH48-1M5A8F1 160 aa12.74□□□□□ -0.37
CLN8-204ENST00000519254 SFTPCP11686 197 aa12.74□□□□□ -0.37
CLN8-204ENST00000519254 IL7P13232 177 aa12.74□□□□□ -0.37
CLN8-204ENST00000519254 SNRPBP14678 240 aaKnown RBP12.74□□□□□ -0.37
CLN8-204ENST00000519254 ABOP16442 354 aa12.74□□□□□ -0.37
CLN8-204ENST00000519254 PTBP1P26599 531 aaKnown RBP eCLIP12.74□□□□□ -0.37
CLN8-204ENST00000519254 TDGF1P3P51864 188 aa12.74□□□□□ -0.37
CLN8-204ENST00000519254 RNPS1Q15287 305 aaKnown RBP12.74□□□□□ -0.37
CLN8-204ENST00000519254 PYDC2Q56P42 97 aa12.74□□□□□ -0.37
CLN8-204ENST00000519254 LRRC28Q86X40 367 aaPredicted RBP12.74□□□□□ -0.37
CLN8-204ENST00000519254 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.74□□□□□ -0.37
CLN8-204ENST00000519254 OR2AJ1Q8NGZ0 328 aa12.74□□□□□ -0.37
CLN8-204ENST00000519254 TCF7L1Q9HCS4 588 aa12.74□□□□□ -0.37
CLN8-204ENST00000519254 EMC3Q9P0I2 261 aa12.74□□□□□ -0.37
CLN8-204ENST00000519254 ABRACLQ9P1F3 81 aa12.74□□□□□ -0.37
CLN8-204ENST00000519254 ASH2LQ9UBL3 628 aa12.74□□□□□ -0.37
CLN8-204ENST00000519254 OR52A1Q9UKL2 312 aa12.74□□□□□ -0.37
CLN8-204ENST00000519254 POLR1DQ9Y2S0 133 aa12.74□□□□□ -0.37
CLN8-204ENST00000519254 NOSIPQ9Y314 301 aaKnown RBP12.74□□□□□ -0.37
CLN8-204ENST00000519254 ZNF175Q9Y473 711 aa12.74□□□□□ -0.37
CLN8-204ENST00000519254 IFITM5A6NNB3 132 aa12.74□□□□□ -0.37
CLN8-204ENST00000519254 DHHO43323 396 aa12.74□□□□□ -0.37
CLN8-204ENST00000519254 CSF3P09919 207 aa12.74□□□□□ -0.37
CLN8-204ENST00000519254 FCGR2AP12318 317 aa12.74□□□□□ -0.37
CLN8-204ENST00000519254 NPR2P20594 1047 aa12.74□□□□□ -0.37
CLN8-204ENST00000519254 DCTDP32321 178 aa12.74□□□□□ -0.37
CLN8-204ENST00000519254 MMP16P51512 607 aa12.74□□□□□ -0.37
CLN8-204ENST00000519254 LSM6P62312 80 aaKnown RBP12.74□□□□□ -0.37
CLN8-204ENST00000519254 RIN1Q13671 783 aa12.74□□□□□ -0.37
CLN8-204ENST00000519254 SGCAQ16586 387 aa12.74□□□□□ -0.37
CLN8-204ENST00000519254 ST3GAL2Q16842 350 aa12.74□□□□□ -0.37
CLN8-204ENST00000519254 ACSF3Q4G176 576 aaPredicted RBP12.74□□□□□ -0.37
CLN8-204ENST00000519254 CD163Q86VB7 1156 aa12.74□□□□□ -0.37
CLN8-204ENST00000519254 ZNF433Q8N7K0 673 aaPredicted RBP12.74□□□□□ -0.37
CLN8-204ENST00000519254 NABP1Q96AH0 204 aa12.74□□□□□ -0.37
CLN8-204ENST00000519254 ZNF837Q96EG3 531 aaPredicted RBP12.74□□□□□ -0.37
CLN8-204ENST00000519254 SLX1AQ9BQ83 275 aa12.74□□□□□ -0.37
CLN8-204ENST00000519254 ZNF416Q9BWM5 594 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms