RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 NUP43Q8NFH3 380 aa12.19□□□□□ -0.46
PABPC1-208ENST00000519004 CNRIP1Q96F85 164 aaPredicted RBP12.19□□□□□ -0.46
PABPC1-208ENST00000519004 SLC35A4Q96G79 324 aa12.19□□□□□ -0.46
PABPC1-208ENST00000519004 IL17FQ96PD4 163 aa12.19□□□□□ -0.46
PABPC1-208ENST00000519004 ZNF587Q96SQ5 575 aaPredicted RBP12.19□□□□□ -0.46
PABPC1-208ENST00000519004 ELP3Q9H9T3 547 aa12.19□□□□□ -0.46
PABPC1-208ENST00000519004 A0A0A6YYD5 115 aa12.19□□□□□ -0.46
PABPC1-208ENST00000519004 NDUFS4O43181 175 aa12.19□□□□□ -0.46
PABPC1-208ENST00000519004 GMFGO60234 142 aa12.19□□□□□ -0.46
PABPC1-208ENST00000519004 CTSHP09668 335 aa12.19□□□□□ -0.46
PABPC1-208ENST00000519004 CD37P11049 281 aa12.19□□□□□ -0.46
PABPC1-208ENST00000519004 RPS12P25398 132 aaKnown RBP12.19□□□□□ -0.46
PABPC1-208ENST00000519004 MC3RP41968 323 aa12.19□□□□□ -0.46
PABPC1-208ENST00000519004 FAM3AP98173 230 aa12.19□□□□□ -0.46
PABPC1-208ENST00000519004 ZNF616Q08AN1 781 aa12.19□□□□□ -0.46
PABPC1-208ENST00000519004 RASGEF1BQ0VAM2 473 aa12.19□□□□□ -0.46
PABPC1-208ENST00000519004 RAB35Q15286 201 aa12.19□□□□□ -0.46
PABPC1-208ENST00000519004 DCXRQ7Z4W1 244 aa12.19□□□□□ -0.46
PABPC1-208ENST00000519004 OR6K6Q8NGW6 343 aa12.19□□□□□ -0.46
PABPC1-208ENST00000519004 ZPLD1Q8TCW7 415 aa12.19□□□□□ -0.46
PABPC1-208ENST00000519004 NPRL2Q8WTW4 380 aa12.19□□□□□ -0.46
PABPC1-208ENST00000519004 ADGRG7Q96K78 797 aa12.19□□□□□ -0.46
PABPC1-208ENST00000519004 NELFAQ9H3P2 528 aa12.19□□□□□ -0.46
PABPC1-208ENST00000519004 MRM2Q9UI43 246 aaKnown RBP12.19□□□□□ -0.46
PABPC1-208ENST00000519004 KLHDC2Q9Y2U9 406 aa12.19□□□□□ -0.46
PABPC1-208ENST00000519004 A0A087WWC5 75 aa12.18□□□□□ -0.46
PABPC1-208ENST00000519004 FEZF1A0PJY2 475 aa12.18□□□□□ -0.46
PABPC1-208ENST00000519004 SLC38A8A6NNN8 435 aa12.18□□□□□ -0.46
PABPC1-208ENST00000519004 C8orf89P0DMQ9 161 aa12.18□□□□□ -0.46
PABPC1-208ENST00000519004 CTSAP10619 480 aa12.18□□□□□ -0.46
PABPC1-208ENST00000519004 CTXN3Q4LDR2 81 aa12.18□□□□□ -0.46
PABPC1-208ENST00000519004 C9orf64Q5T6V5 341 aa12.18□□□□□ -0.46
PABPC1-208ENST00000519004 ZNF101Q8IZC7 436 aa12.18□□□□□ -0.46
PABPC1-208ENST00000519004 TMEM104Q8NE00 496 aa12.18□□□□□ -0.46
PABPC1-208ENST00000519004 OR2AP1Q8NGE2 309 aa12.18□□□□□ -0.46
PABPC1-208ENST00000519004 RNF128Q8TEB7 428 aa12.18□□□□□ -0.46
PABPC1-208ENST00000519004 MCHR2Q969V1 340 aa12.18□□□□□ -0.46
PABPC1-208ENST00000519004 RAB39BQ96DA2 213 aa12.18□□□□□ -0.46
PABPC1-208ENST00000519004 ARSGQ96EG1 525 aa12.18□□□□□ -0.46
PABPC1-208ENST00000519004 DTD2Q96FN9 168 aa12.18□□□□□ -0.46
PABPC1-208ENST00000519004 CNTNAP3Q9BZ76 1288 aa12.18□□□□□ -0.46
PABPC1-208ENST00000519004 TCEAL2Q9H3H9 227 aaPredicted RBP12.18□□□□□ -0.46
PABPC1-208ENST00000519004 CBLN4Q9NTU7 201 aa12.18□□□□□ -0.46
PABPC1-208ENST00000519004 OR4C45A6NMZ5 311 aa12.18□□□□□ -0.46
PABPC1-208ENST00000519004 PEX12O00623 359 aa12.18□□□□□ -0.46
PABPC1-208ENST00000519004 DNAJB6O75190 326 aa12.18□□□□□ -0.46
PABPC1-208ENST00000519004 ABHD16AO95870 558 aa12.18□□□□□ -0.46
PABPC1-208ENST00000519004 AMBPP02760 352 aa12.18□□□□□ -0.46
PABPC1-208ENST00000519004 GAPDHP04406 335 aaKnown RBP12.18□□□□□ -0.46
PABPC1-208ENST00000519004 HMGB2P26583 209 aaKnown RBP12.18□□□□□ -0.46
PABPC1-208ENST00000519004 PMPCAQ10713 525 aa12.18□□□□□ -0.46
PABPC1-208ENST00000519004 ZNF658BQ4V348 819 aaPredicted RBP12.18□□□□□ -0.46
PABPC1-208ENST00000519004 SOHLH1Q5JUK2 328 aa12.18□□□□□ -0.46
PABPC1-208ENST00000519004 POMZP3Q6PJE2 187 aa12.18□□□□□ -0.46
PABPC1-208ENST00000519004 SLC22A25Q6T423 547 aa12.18□□□□□ -0.46
PABPC1-208ENST00000519004 HSD11B1LQ7Z5J1 315 aa12.18□□□□□ -0.46
PABPC1-208ENST00000519004 C2orf15Q8WU43 125 aaKnown RBP12.18□□□□□ -0.46
PABPC1-208ENST00000519004 OR2M4Q96R27 311 aa12.18□□□□□ -0.46
PABPC1-208ENST00000519004 Q9N2J8 555 aa12.18□□□□□ -0.46
PABPC1-208ENST00000519004 RNF181Q9P0P0 153 aa12.18□□□□□ -0.46
PABPC1-208ENST00000519004 FBXL17Q9UF56 701 aa12.18□□□□□ -0.46
PABPC1-208ENST00000519004 NFKBIEO00221 500 aa12.17□□□□□ -0.46
PABPC1-208ENST00000519004 BNIP3LO60238 219 aa12.17□□□□□ -0.46
PABPC1-208ENST00000519004 ELFN1P0C7U0 828 aa12.17□□□□□ -0.46
PABPC1-208ENST00000519004 DANCRP0C864 163 aa12.17□□□□□ -0.46
PABPC1-208ENST00000519004 TAGLN2P37802 199 aaKnown RBP12.17□□□□□ -0.46
PABPC1-208ENST00000519004 RGS19P49795 217 aa12.17□□□□□ -0.46
PABPC1-208ENST00000519004 GLO1Q04760 184 aa12.17□□□□□ -0.46
PABPC1-208ENST00000519004 TMEM31Q5JXX7 168 aa12.17□□□□□ -0.46
PABPC1-208ENST00000519004 DMRTA1Q5VZB9 504 aa12.17□□□□□ -0.46
PABPC1-208ENST00000519004 TMEM220Q6QAJ8 160 aa12.17□□□□□ -0.46
PABPC1-208ENST00000519004 ZNF793Q6ZN11 406 aa12.17□□□□□ -0.46
PABPC1-208ENST00000519004 CDS1Q92903 461 aa12.17□□□□□ -0.46
PABPC1-208ENST00000519004 THOC3Q96J01 351 aaKnown RBP12.17□□□□□ -0.46
PABPC1-208ENST00000519004 OR10C1Q96KK4 312 aa12.17□□□□□ -0.46
PABPC1-208ENST00000519004 ULBP3Q9BZM4 244 aa12.17□□□□□ -0.46
PABPC1-208ENST00000519004 MTHFD2LQ9H903 347 aaPredicted RBP12.17□□□□□ -0.46
PABPC1-208ENST00000519004 RAB18Q9NP72 206 aa12.17□□□□□ -0.46
PABPC1-208ENST00000519004 PRR13Q9NZ81 148 aa12.17□□□□□ -0.46
PABPC1-208ENST00000519004 ADAM29Q9UKF5 820 aa12.17□□□□□ -0.46
PABPC1-208ENST00000519004 IER3IP1Q9Y5U9 82 aa12.17□□□□□ -0.46
PABPC1-208ENST00000519004 NUMA1Q14980 2115 aa12.17□□□□□ -0.46
PABPC1-208ENST00000519004 FITM1A5D6W6 292 aa12.17□□□□□ -0.46
PABPC1-208ENST00000519004 ZNF705GA8MUZ8 300 aaPredicted RBP12.17□□□□□ -0.46
PABPC1-208ENST00000519004 ZNF432O94892 652 aa12.17□□□□□ -0.46
PABPC1-208ENST00000519004 SLC35G4P0C7Q5 338 aa12.17□□□□□ -0.46
PABPC1-208ENST00000519004 FHITP49789 147 aa12.17□□□□□ -0.46
PABPC1-208ENST00000519004 TRA2BP62995 288 aaKnown RBP12.17□□□□□ -0.46
PABPC1-208ENST00000519004 SPEM2Q0P670 501 aa12.17□□□□□ -0.46
PABPC1-208ENST00000519004 IL15RAQ13261 267 aa12.17□□□□□ -0.46
PABPC1-208ENST00000519004 TMEM35AQ53FP2 167 aa12.17□□□□□ -0.46
PABPC1-208ENST00000519004 RPUSD3Q6P087 351 aaKnown RBP12.17□□□□□ -0.46
PABPC1-208ENST00000519004 DLK2Q6UY11 383 aa12.17□□□□□ -0.46
PABPC1-208ENST00000519004 SUMF2Q8NBJ7 301 aa12.17□□□□□ -0.46
PABPC1-208ENST00000519004 POC1AQ8NBT0 407 aa12.17□□□□□ -0.46
PABPC1-208ENST00000519004 NPEPL1Q8NDH3 523 aa12.17□□□□□ -0.46
PABPC1-208ENST00000519004 RCC1LQ96I51 464 aaKnown RBP12.17□□□□□ -0.46
PABPC1-208ENST00000519004 SNX22Q96L94 193 aa12.17□□□□□ -0.46
PABPC1-208ENST00000519004 CCNL2Q96S94 520 aaPredicted RBP12.17□□□□□ -0.46
PABPC1-208ENST00000519004 INTS14Q96SY0 518 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms