RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 SPI1P17947 270 aa11.33□□□□□ -0.6
VEGFA-219ENST00000518824 GSTM3P21266 225 aa11.33□□□□□ -0.6
VEGFA-219ENST00000518824 POU1F1P28069 291 aa11.33□□□□□ -0.6
VEGFA-219ENST00000518824 GCH1P30793 250 aa11.33□□□□□ -0.6
VEGFA-219ENST00000518824 HLXQ14774 488 aaPredicted RBP11.33□□□□□ -0.6
VEGFA-219ENST00000518824 KRTAP27-1Q3LI81 207 aa11.33□□□□□ -0.6
VEGFA-219ENST00000518824 LINC01590Q5TEZ4 76 aa11.33□□□□□ -0.6
VEGFA-219ENST00000518824 TMEM236Q5W0B7 351 aa11.33□□□□□ -0.6
VEGFA-219ENST00000518824 Q6ZR03 302 aa11.33□□□□□ -0.6
VEGFA-219ENST00000518824 PROKR2Q8NFJ6 384 aa11.33□□□□□ -0.6
VEGFA-219ENST00000518824 OR2T33Q8NG76 320 aa11.33□□□□□ -0.6
VEGFA-219ENST00000518824 POP5Q969H6 163 aaKnown RBP11.33□□□□□ -0.6
VEGFA-219ENST00000518824 CMBLQ96DG6 245 aa11.33□□□□□ -0.6
VEGFA-219ENST00000518824 ELOVL3Q9HB03 270 aa11.33□□□□□ -0.6
VEGFA-219ENST00000518824 MYOZ1Q9NP98 299 aaPredicted RBP11.33□□□□□ -0.6
VEGFA-219ENST00000518824 ZNF275Q9NSD4 429 aaPredicted RBP11.33□□□□□ -0.6
VEGFA-219ENST00000518824 TBCCD1Q9NVR7 557 aa11.33□□□□□ -0.6
VEGFA-219ENST00000518824 PTTG3PQ9NZH4 202 aa11.33□□□□□ -0.6
VEGFA-219ENST00000518824 DNAJB9Q9UBS3 223 aa11.33□□□□□ -0.6
VEGFA-219ENST00000518824 KLHL21Q9UJP4 597 aa11.33□□□□□ -0.6
VEGFA-219ENST00000518824 FBXO9Q9UK97 447 aaPredicted RBP11.33□□□□□ -0.6
VEGFA-219ENST00000518824 H3BN98 237 aa11.32□□□□□ -0.6
VEGFA-219ENST00000518824 E2F6O75461 281 aa11.32□□□□□ -0.6
VEGFA-219ENST00000518824 DAPP51397 102 aa11.32□□□□□ -0.6
VEGFA-219ENST00000518824 ZNF81P51508 661 aa11.32□□□□□ -0.6
VEGFA-219ENST00000518824 SELENOVP59797 346 aa11.32□□□□□ -0.6
VEGFA-219ENST00000518824 GINS1Q14691 196 aa11.32□□□□□ -0.6
VEGFA-219ENST00000518824 C6orf52Q5T4I8 152 aa11.32□□□□□ -0.6
VEGFA-219ENST00000518824 AMIGO2Q86SJ2 522 aa11.32□□□□□ -0.6
VEGFA-219ENST00000518824 PRIMA1Q86XR5 153 aa11.32□□□□□ -0.6
VEGFA-219ENST00000518824 GJC3Q8NFK1 279 aa11.32□□□□□ -0.6
VEGFA-219ENST00000518824 TEX47Q8TBZ9 253 aa11.32□□□□□ -0.6
VEGFA-219ENST00000518824 PTP4A1Q93096 173 aa11.32□□□□□ -0.6
VEGFA-219ENST00000518824 MSI2Q96DH6 328 aaKnown RBP11.32□□□□□ -0.6
VEGFA-219ENST00000518824 PITX2Q99697 317 aa11.32□□□□□ -0.6
VEGFA-219ENST00000518824 COQ7Q99807 217 aa11.32□□□□□ -0.6
VEGFA-219ENST00000518824 NARFLQ9H6Q4 476 aa11.32□□□□□ -0.6
VEGFA-219ENST00000518824 DCAF16Q9NXF7 216 aa11.32□□□□□ -0.6
VEGFA-219ENST00000518824 SLCO1C1Q9NYB5 712 aa11.32□□□□□ -0.6
VEGFA-219ENST00000518824 COMMD3-BMI1R4GMX3 469 aa11.32□□□□□ -0.6
VEGFA-219ENST00000518824 F5H5K5 113 aa11.31□□□□□ -0.6
VEGFA-219ENST00000518824 MITFO75030 526 aaPredicted RBP11.31□□□□□ -0.6
VEGFA-219ENST00000518824 ERCC1P07992 297 aaPredicted RBP11.31□□□□□ -0.6
VEGFA-219ENST00000518824 TACSTD2P09758 323 aa11.31□□□□□ -0.6
VEGFA-219ENST00000518824 ACSM4P0C7M7 580 aa11.31□□□□□ -0.6
VEGFA-219ENST00000518824 ZNF23P17027 643 aa11.31□□□□□ -0.6
VEGFA-219ENST00000518824 GRK5P34947 590 aa11.31□□□□□ -0.6
VEGFA-219ENST00000518824 ARHGDIAP52565 204 aa11.31□□□□□ -0.6
VEGFA-219ENST00000518824 SLC25A1P53007 311 aa11.31□□□□□ -0.6
VEGFA-219ENST00000518824 GK3PQ14409 553 aa11.31□□□□□ -0.6
VEGFA-219ENST00000518824 SHQ1Q6PI26 577 aaKnown RBP11.31□□□□□ -0.6
VEGFA-219ENST00000518824 USP51Q70EK9 711 aa11.31□□□□□ -0.6
VEGFA-219ENST00000518824 ASRGL1Q7L266 308 aa11.31□□□□□ -0.6
VEGFA-219ENST00000518824 OR5AS1Q8N127 324 aa11.31□□□□□ -0.6
VEGFA-219ENST00000518824 OR2T4Q8NH00 348 aa11.31□□□□□ -0.6
VEGFA-219ENST00000518824 SNX33Q8WV41 574 aa11.31□□□□□ -0.6
VEGFA-219ENST00000518824 RDH5Q92781 318 aa11.31□□□□□ -0.6
VEGFA-219ENST00000518824 CDADC1Q9BWV3 514 aa11.31□□□□□ -0.6
VEGFA-219ENST00000518824 HDHD2Q9H0R4 259 aa11.31□□□□□ -0.6
VEGFA-219ENST00000518824 CMC2Q9NRP2 79 aa11.31□□□□□ -0.6
VEGFA-219ENST00000518824 PURGQ9UJV8 347 aaKnown RBP11.31□□□□□ -0.6
VEGFA-219ENST00000518824 BAIAP2Q9UQB8 552 aa11.31□□□□□ -0.6
VEGFA-219ENST00000518824 TANC2Q9HCD6 1990 aa11.3□□□□□ -0.6
VEGFA-219ENST00000518824 TIMM8AO60220 97 aaPredicted RBP11.3□□□□□ -0.6
VEGFA-219ENST00000518824 ATP5HO75947 161 aa11.3□□□□□ -0.6
VEGFA-219ENST00000518824 SPARCP09486 303 aa11.3□□□□□ -0.6
VEGFA-219ENST00000518824 OSMP13725 252 aa11.3□□□□□ -0.6
VEGFA-219ENST00000518824 ZNF823P16415 610 aa11.3□□□□□ -0.6
VEGFA-219ENST00000518824 EPHA2P29317 976 aa11.3□□□□□ -0.6
VEGFA-219ENST00000518824 RASSF2P50749 326 aa11.3□□□□□ -0.6
VEGFA-219ENST00000518824 CDK5Q00535 292 aa11.3□□□□□ -0.6
VEGFA-219ENST00000518824 AVPI1Q5T686 147 aa11.3□□□□□ -0.6
VEGFA-219ENST00000518824 C1orf146Q5VVC0 180 aa11.3□□□□□ -0.6
VEGFA-219ENST00000518824 OR2T2Q6IF00 324 aa11.3□□□□□ -0.6
VEGFA-219ENST00000518824 COLCA1Q6ZS62 124 aa11.3□□□□□ -0.6
VEGFA-219ENST00000518824 SPATC1Q76KD6 591 aa11.3□□□□□ -0.6
VEGFA-219ENST00000518824 DCXRQ7Z4W1 244 aa11.3□□□□□ -0.6
VEGFA-219ENST00000518824 BBS1Q8NFJ9 593 aa11.3□□□□□ -0.6
VEGFA-219ENST00000518824 OR6K6Q8NGW6 343 aa11.3□□□□□ -0.6
VEGFA-219ENST00000518824 OR2AJ1Q8NGZ0 328 aa11.3□□□□□ -0.6
VEGFA-219ENST00000518824 LRTOMTQ8WZ04 291 aa11.3□□□□□ -0.6
VEGFA-219ENST00000518824 OTULINQ96BN8 352 aa11.3□□□□□ -0.6
VEGFA-219ENST00000518824 HAVCR1Q96D42 359 aa11.3□□□□□ -0.6
VEGFA-219ENST00000518824 AMELYQ99218 206 aa11.3□□□□□ -0.6
VEGFA-219ENST00000518824 CHODLQ9H9P2 273 aa11.3□□□□□ -0.6
VEGFA-219ENST00000518824 NKIRAS2Q9NYR9 191 aa11.3□□□□□ -0.6
VEGFA-219ENST00000518824 RIIAD1A6NNX1 92 aa11.29□□□□□ -0.6
VEGFA-219ENST00000518824 A8MV72 311 aaPredicted RBP11.29□□□□□ -0.6
VEGFA-219ENST00000518824 H0YL77 283 aa11.29□□□□□ -0.6
VEGFA-219ENST00000518824 M0R129 80 aa11.29□□□□□ -0.6
VEGFA-219ENST00000518824 ZNF593O00488 134 aaPredicted RBP11.29□□□□□ -0.6
VEGFA-219ENST00000518824 SURF4O15260 269 aa11.29□□□□□ -0.6
VEGFA-219ENST00000518824 TPD52L2O43399 206 aaKnown RBP11.29□□□□□ -0.6
VEGFA-219ENST00000518824 PPIHO43447 177 aaKnown RBP11.29□□□□□ -0.6
VEGFA-219ENST00000518824 TLX2O43763 284 aaPredicted RBP11.29□□□□□ -0.6
VEGFA-219ENST00000518824 CRLF1O75462 422 aa11.29□□□□□ -0.6
VEGFA-219ENST00000518824 ANXA8P13928 327 aa11.29□□□□□ -0.6
VEGFA-219ENST00000518824 ZNF3P17036 446 aa11.29□□□□□ -0.6
VEGFA-219ENST00000518824 KITLGP21583 273 aa11.29□□□□□ -0.6
VEGFA-219ENST00000518824 ACHEP22303 614 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms