RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 USE1Q9NZ43 259 aa18.86■□□□□ 0.61
VEGFA-217ENST00000518538 ARFGEF3Q5TH69 2177 aa18.86■□□□□ 0.61
VEGFA-217ENST00000518538 J3QW42 95 aa18.85■□□□□ 0.61
VEGFA-217ENST00000518538 EI24O14681 340 aa18.85■□□□□ 0.61
VEGFA-217ENST00000518538 PRKYO43930 277 aa18.85■□□□□ 0.61
VEGFA-217ENST00000518538 SSX4O60224 188 aa18.85■□□□□ 0.61
VEGFA-217ENST00000518538 CLPTM1O96005 669 aa18.85■□□□□ 0.61
VEGFA-217ENST00000518538 F12P00748 615 aaPredicted RBP18.85■□□□□ 0.61
VEGFA-217ENST00000518538 ERCC1P07992 297 aaPredicted RBP18.85■□□□□ 0.61
VEGFA-217ENST00000518538 ADRA2AP08913 450 aa18.85■□□□□ 0.61
VEGFA-217ENST00000518538 SLC2A5P22732 501 aa18.85■□□□□ 0.61
VEGFA-217ENST00000518538 TUBG1P23258 451 aa18.85■□□□□ 0.61
VEGFA-217ENST00000518538 GCH1P30793 250 aa18.85■□□□□ 0.61
VEGFA-217ENST00000518538 ALDH3B1P43353 468 aa18.85■□□□□ 0.61
VEGFA-217ENST00000518538 RGS6P49758 472 aa18.85■□□□□ 0.61
VEGFA-217ENST00000518538 KLHL12Q53G59 568 aa18.85■□□□□ 0.61
VEGFA-217ENST00000518538 DCXRQ7Z4W1 244 aa18.85■□□□□ 0.61
VEGFA-217ENST00000518538 ERI1Q8IV48 349 aaKnown RBP18.85■□□□□ 0.61
VEGFA-217ENST00000518538 BBS1Q8NFJ9 593 aa18.85■□□□□ 0.61
VEGFA-217ENST00000518538 OR10S1Q8NGN2 331 aa18.85■□□□□ 0.61
VEGFA-217ENST00000518538 KLF14Q8TD94 323 aaPredicted RBP18.85■□□□□ 0.61
VEGFA-217ENST00000518538 COG8Q96MW5 612 aa18.85■□□□□ 0.61
VEGFA-217ENST00000518538 OR2J1Q9GZK6 312 aa18.85■□□□□ 0.61
VEGFA-217ENST00000518538 MS4A5Q9H3V2 200 aa18.85■□□□□ 0.61
VEGFA-217ENST00000518538 RIBC2Q9H4K1 309 aa18.85■□□□□ 0.61
VEGFA-217ENST00000518538 TUBG2Q9NRH3 451 aa18.85■□□□□ 0.61
VEGFA-217ENST00000518538 DDX28Q9NUL7 540 aaKnown RBP18.85■□□□□ 0.61
VEGFA-217ENST00000518538 SLCO1C1Q9NYB5 712 aa18.85■□□□□ 0.61
VEGFA-217ENST00000518538 GPR160Q9UJ42 338 aa18.85■□□□□ 0.61
VEGFA-217ENST00000518538 IGHV3-13P01766 116 aa18.84■□□□□ 0.61
VEGFA-217ENST00000518538 CD99P14209 185 aa18.84■□□□□ 0.61
VEGFA-217ENST00000518538 POLR2IP36954 125 aaKnown RBP18.84■□□□□ 0.61
VEGFA-217ENST00000518538 ALDH3A2P51648 485 aa18.84■□□□□ 0.61
VEGFA-217ENST00000518538 MAD2L1BPQ15013 274 aaPredicted RBP18.84■□□□□ 0.61
VEGFA-217ENST00000518538 MOGQ16653 247 aa18.84■□□□□ 0.61
VEGFA-217ENST00000518538 RSPO1Q2MKA7 263 aaPredicted RBP18.84■□□□□ 0.61
VEGFA-217ENST00000518538 DNM1P46Q6ZS02 220 aa18.84■□□□□ 0.61
VEGFA-217ENST00000518538 LURAP1LQ8IV03 231 aa18.84■□□□□ 0.61
VEGFA-217ENST00000518538 TIGD4Q8IY51 512 aa18.84■□□□□ 0.61
VEGFA-217ENST00000518538 OR6N2Q8NGY6 317 aa18.84■□□□□ 0.61
VEGFA-217ENST00000518538 ZMYND19Q96E35 227 aaPredicted RBP18.84■□□□□ 0.61
VEGFA-217ENST00000518538 C9orf16Q9BUW7 83 aa18.84■□□□□ 0.61
VEGFA-217ENST00000518538 TAAR3PQ9P1P4 343 aa18.84■□□□□ 0.61
VEGFA-217ENST00000518538 ORC6Q9Y5N6 252 aa18.84■□□□□ 0.61
VEGFA-217ENST00000518538 RTTNQ86VV8 2226 aa18.84■□□□□ 0.61
VEGFA-217ENST00000518538 MPV17P39210 176 aa18.83■□□□□ 0.6
VEGFA-217ENST00000518538 RPS7P62081 194 aaKnown RBP18.83■□□□□ 0.6
VEGFA-217ENST00000518538 EFNB1P98172 346 aa18.83■□□□□ 0.6
VEGFA-217ENST00000518538 NKPD1Q17RQ9 610 aa18.83■□□□□ 0.6
VEGFA-217ENST00000518538 SHFQ7M4L6 423 aa18.83■□□□□ 0.6
VEGFA-217ENST00000518538 ZCCHC24Q8N2G6 241 aaKnown RBP18.83■□□□□ 0.6
VEGFA-217ENST00000518538 CBR4Q8N4T8 237 aa18.83■□□□□ 0.6
VEGFA-217ENST00000518538 TMEM163Q8TC26 289 aa18.83■□□□□ 0.6
VEGFA-217ENST00000518538 ST7LQ8TDW4 575 aa18.83■□□□□ 0.6
VEGFA-217ENST00000518538 NEU4Q8WWR8 484 aaPredicted RBP18.83■□□□□ 0.6
VEGFA-217ENST00000518538 APOBEC3DQ96AK3 386 aaPredicted RBP18.83■□□□□ 0.6
VEGFA-217ENST00000518538 DLL4Q9NR61 685 aa18.83■□□□□ 0.6
VEGFA-217ENST00000518538 TRIM64A6NGJ6 449 aa18.82■□□□□ 0.6
VEGFA-217ENST00000518538 TRIM64BA6NI03 449 aa18.82■□□□□ 0.6
VEGFA-217ENST00000518538 F5H5K5 113 aa18.82■□□□□ 0.6
VEGFA-217ENST00000518538 M0R129 80 aa18.82■□□□□ 0.6
VEGFA-217ENST00000518538 TLX2O43763 284 aaPredicted RBP18.82■□□□□ 0.6
VEGFA-217ENST00000518538 BAG2O95816 211 aa18.82■□□□□ 0.6
VEGFA-217ENST00000518538 ACSM4P0C7M7 580 aa18.82■□□□□ 0.6
VEGFA-217ENST00000518538 RAD23AP54725 363 aa18.82■□□□□ 0.6
VEGFA-217ENST00000518538 DSCR9P59020 149 aa18.82■□□□□ 0.6
VEGFA-217ENST00000518538 APOFQ13790 326 aa18.82■□□□□ 0.6
VEGFA-217ENST00000518538 COLCA1Q6ZS62 124 aa18.82■□□□□ 0.6
VEGFA-217ENST00000518538 DPY19L4Q7Z388 723 aa18.82■□□□□ 0.6
VEGFA-217ENST00000518538 ZNF525Q8N782 197 aa18.82■□□□□ 0.6
VEGFA-217ENST00000518538 TCEANCQ8N8B7 351 aa18.82■□□□□ 0.6
VEGFA-217ENST00000518538 OR5L1Q8NGL2 311 aa18.82■□□□□ 0.6
VEGFA-217ENST00000518538 SNX33Q8WV41 574 aa18.82■□□□□ 0.6
VEGFA-217ENST00000518538 SPTSSAQ969W0 71 aa18.82■□□□□ 0.6
VEGFA-217ENST00000518538 SLAMF6Q96DU3 332 aa18.82■□□□□ 0.6
VEGFA-217ENST00000518538 TPK1Q9H3S4 243 aa18.82■□□□□ 0.6
VEGFA-217ENST00000518538 STARD10Q9Y365 291 aa18.82■□□□□ 0.6
VEGFA-217ENST00000518538 ZNF878C9JN71 531 aa18.81■□□□□ 0.6
VEGFA-217ENST00000518538 ANKRD65E5RJM6 399 aa18.81■□□□□ 0.6
VEGFA-217ENST00000518538 SELENOFO60613 162 aa18.81■□□□□ 0.6
VEGFA-217ENST00000518538 LY6HO94772 140 aa18.81■□□□□ 0.6
VEGFA-217ENST00000518538 CSF3P09919 207 aa18.81■□□□□ 0.6
VEGFA-217ENST00000518538 NAT2P11245 290 aa18.81■□□□□ 0.6
VEGFA-217ENST00000518538 TNK1Q13470 666 aa18.81■□□□□ 0.6
VEGFA-217ENST00000518538 EIF2B1Q14232 305 aaKnown RBP18.81■□□□□ 0.6
VEGFA-217ENST00000518538 ALKBH6Q3KRA9 238 aa18.81■□□□□ 0.6
VEGFA-217ENST00000518538 TMEM255AQ5JRV8 349 aa18.81■□□□□ 0.6
VEGFA-217ENST00000518538 LCN1P1Q5VSP4 162 aa18.81■□□□□ 0.6
VEGFA-217ENST00000518538 CLEC2AQ6UVW9 174 aa18.81■□□□□ 0.6
VEGFA-217ENST00000518538 TEAD3Q99594 435 aa18.81■□□□□ 0.6
VEGFA-217ENST00000518538 COPS4Q9BT78 406 aa18.81■□□□□ 0.6
VEGFA-217ENST00000518538 C1QTNF5Q9BXJ0 243 aa18.81■□□□□ 0.6
VEGFA-217ENST00000518538 POFUT1Q9H488 388 aa18.81■□□□□ 0.6
VEGFA-217ENST00000518538 MYOZ1Q9NP98 299 aaPredicted RBP18.81■□□□□ 0.6
VEGFA-217ENST00000518538 ITPR3Q14573 2671 aa18.8■□□□□ 0.6
VEGFA-217ENST00000518538 CCDC182A6NF36 153 aa18.8■□□□□ 0.6
VEGFA-217ENST00000518538 M0R135 149 aa18.8■□□□□ 0.6
VEGFA-217ENST00000518538 MT-ND5P03915 603 aa18.8■□□□□ 0.6
VEGFA-217ENST00000518538 OTX1P32242 354 aaPredicted RBP18.8■□□□□ 0.6
VEGFA-217ENST00000518538 TPTEP56180 551 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms