RNA–Protein interactions for RNA: ENST00000518140.5

SLIT3-204, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 2,090 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-204ENST00000518140 SLC22A4Q9H015 551 aa20.6■□□□□ 0.89
SLIT3-204ENST00000518140 CRLF2Q9HC73 371 aa20.6■□□□□ 0.89
SLIT3-204ENST00000518140 PNRC2Q9NPJ4 139 aaKnown RBP20.6■□□□□ 0.89
SLIT3-204ENST00000518140 CLEC4AQ9UMR7 237 aa20.6■□□□□ 0.89
SLIT3-204ENST00000518140 DMXL2Q8TDJ6 3036 aa20.6■□□□□ 0.89
SLIT3-204ENST00000518140 TMEM269A0A1B0GVZ9 245 aa20.6■□□□□ 0.89
SLIT3-204ENST00000518140 FAM172BPA6NC97 362 aa20.6■□□□□ 0.89
SLIT3-204ENST00000518140 GPR171O14626 319 aa20.6■□□□□ 0.89
SLIT3-204ENST00000518140 NR2C1P13056 603 aa20.6■□□□□ 0.89
SLIT3-204ENST00000518140 FOXL2NBQ6ZUU3 175 aa20.6■□□□□ 0.89
SLIT3-204ENST00000518140 ST6GAL2Q96JF0 529 aa20.6■□□□□ 0.89
SLIT3-204ENST00000518140 TNRC6AQ8NDV7 1962 aaKnown RBP20.59■□□□□ 0.89
SLIT3-204ENST00000518140 MEIOCA2RUB1 952 aa20.59■□□□□ 0.89
SLIT3-204ENST00000518140 FABP12A6NFH5 140 aa20.59■□□□□ 0.89
SLIT3-204ENST00000518140 HMX3A6NHT5 357 aa20.59■□□□□ 0.89
SLIT3-204ENST00000518140 ACTL6AO96019 429 aa20.59■□□□□ 0.89
SLIT3-204ENST00000518140 MSR1P21757 451 aa20.59■□□□□ 0.89
SLIT3-204ENST00000518140 DDI2Q5TDH0 399 aa20.59■□□□□ 0.89
SLIT3-204ENST00000518140 WDYHV1Q96HA8 205 aa20.59■□□□□ 0.89
SLIT3-204ENST00000518140 DIRAS2Q96HU8 199 aa20.59■□□□□ 0.89
SLIT3-204ENST00000518140 ALKBH3Q96Q83 286 aaPredicted RBP20.59■□□□□ 0.89
SLIT3-204ENST00000518140 NELFAQ9H3P2 528 aa20.59■□□□□ 0.89
SLIT3-204ENST00000518140 OR52A1Q9UKL2 312 aa20.59■□□□□ 0.89
SLIT3-204ENST00000518140 WASF3Q9UPY6 502 aa20.59■□□□□ 0.89
SLIT3-204ENST00000518140 A0A0B4J203 849 aa20.58■□□□□ 0.89
SLIT3-204ENST00000518140 PAHP00439 452 aa20.58■□□□□ 0.89
SLIT3-204ENST00000518140 IGHV3-9P01782 118 aa20.58■□□□□ 0.89
SLIT3-204ENST00000518140 ANOS1P23352 680 aa20.58■□□□□ 0.89
SLIT3-204ENST00000518140 TUSC5Q8IXB3 177 aa20.58■□□□□ 0.89
SLIT3-204ENST00000518140 GPR148Q8TDV2 347 aa20.58■□□□□ 0.89
SLIT3-204ENST00000518140 PHYHIPQ92561 330 aa20.58■□□□□ 0.89
SLIT3-204ENST00000518140 RTTNQ86VV8 2226 aa20.58■□□□□ 0.89
SLIT3-204ENST00000518140 IGKV3D-15A0A087WSY6 115 aa20.58■□□□□ 0.88
SLIT3-204ENST00000518140 TRAV17A0A0B4J275 112 aa20.58■□□□□ 0.88
SLIT3-204ENST00000518140 SYNGR4O95473 234 aa20.58■□□□□ 0.88
SLIT3-204ENST00000518140 LSM6P62312 80 aaKnown RBP20.58■□□□□ 0.88
SLIT3-204ENST00000518140 TAB1Q15750 504 aa20.58■□□□□ 0.88
SLIT3-204ENST00000518140 DDX28Q9NUL7 540 aaKnown RBP20.58■□□□□ 0.88
SLIT3-204ENST00000518140 FAM206AQ9NX38 181 aa20.58■□□□□ 0.88
SLIT3-204ENST00000518140 BOD1L1Q8NFC6 3051 aa20.58■□□□□ 0.88
SLIT3-204ENST00000518140 TRAV8-7A0A075B6U6 113 aa20.57■□□□□ 0.88
SLIT3-204ENST00000518140 TRBV5-7A0A0A0MS05 114 aa20.57■□□□□ 0.88
SLIT3-204ENST00000518140 TFECO14948 347 aaPredicted RBP20.57■□□□□ 0.88
SLIT3-204ENST00000518140 CSF3P09919 207 aa20.57■□□□□ 0.88
SLIT3-204ENST00000518140 ATF1P18846 271 aa20.57■□□□□ 0.88
SLIT3-204ENST00000518140 GUCA1AP43080 201 aaPredicted RBP20.57■□□□□ 0.88
SLIT3-204ENST00000518140 ZFP69Q49AA0 526 aa20.57■□□□□ 0.88
SLIT3-204ENST00000518140 TMEM106AQ96A25 262 aa20.57■□□□□ 0.88
SLIT3-204ENST00000518140 LINC00854A0A1B0GVQ3 168 aa20.57■□□□□ 0.88
SLIT3-204ENST00000518140 CENPXA8MT69 81 aa20.57■□□□□ 0.88
SLIT3-204ENST00000518140 EPXP11678 715 aa20.57■□□□□ 0.88
SLIT3-204ENST00000518140 ZNF24P17028 368 aa20.57■□□□□ 0.88
SLIT3-204ENST00000518140 GPR137CQ8N3F9 429 aa20.57■□□□□ 0.88
SLIT3-204ENST00000518140 PRRG4Q9BZD6 226 aa20.57■□□□□ 0.88
SLIT3-204ENST00000518140 ZCCHC4Q9H5U6 513 aa20.57■□□□□ 0.88
SLIT3-204ENST00000518140 CALHM2Q9HA72 323 aa20.57■□□□□ 0.88
SLIT3-204ENST00000518140 MCTS1Q9ULC4 181 aaKnown RBP20.57■□□□□ 0.88
SLIT3-204ENST00000518140 NOSIPQ9Y314 301 aaKnown RBP20.57■□□□□ 0.88
SLIT3-204ENST00000518140 PDGFAP04085 211 aa20.56■□□□□ 0.88
SLIT3-204ENST00000518140 ADRA2CP18825 462 aa20.56■□□□□ 0.88
SLIT3-204ENST00000518140 MMP16P51512 607 aa20.56■□□□□ 0.88
SLIT3-204ENST00000518140 ZNF84P51523 738 aa20.56■□□□□ 0.88
SLIT3-204ENST00000518140 PRKXP51817 358 aa20.56■□□□□ 0.88
SLIT3-204ENST00000518140 ZNF433Q8N7K0 673 aaPredicted RBP20.56■□□□□ 0.88
SLIT3-204ENST00000518140 FBXO17Q96EF6 278 aa20.56■□□□□ 0.88
SLIT3-204ENST00000518140 MMP28Q9H239 520 aa20.56■□□□□ 0.88
SLIT3-204ENST00000518140 NOTOA8MTQ0 251 aa20.55■□□□□ 0.88
SLIT3-204ENST00000518140 ZNF878C9JN71 531 aa20.55■□□□□ 0.88
SLIT3-204ENST00000518140 K7EM74 188 aa20.55■□□□□ 0.88
SLIT3-204ENST00000518140 TBRG1Q3YBR2 411 aa20.55■□□□□ 0.88
SLIT3-204ENST00000518140 TSPO2Q5TGU0 170 aa20.55■□□□□ 0.88
SLIT3-204ENST00000518140 ASPHD2Q6ICH7 369 aa20.55■□□□□ 0.88
SLIT3-204ENST00000518140 STAC2Q6ZMT1 411 aa20.55■□□□□ 0.88
SLIT3-204ENST00000518140 TSEN15Q8WW01 171 aaKnown RBP20.55■□□□□ 0.88
SLIT3-204ENST00000518140 TMEM45BQ96B21 275 aa20.55■□□□□ 0.88
SLIT3-204ENST00000518140 CAMK2AQ9UQM7 478 aa20.55■□□□□ 0.88
SLIT3-204ENST00000518140 LMX1BO60663 402 aa20.55■□□□□ 0.88
SLIT3-204ENST00000518140 TGM6O95932 706 aa20.55■□□□□ 0.88
SLIT3-204ENST00000518140 SLC2A1P11166 492 aa20.55■□□□□ 0.88
SLIT3-204ENST00000518140 CPN1P15169 458 aa20.55■□□□□ 0.88
SLIT3-204ENST00000518140 CFL1P23528 166 aaKnown RBP20.55■□□□□ 0.88
SLIT3-204ENST00000518140 PPP3R1P63098 170 aa20.55■□□□□ 0.88
SLIT3-204ENST00000518140 MRPS34P82930 218 aaKnown RBP20.55■□□□□ 0.88
SLIT3-204ENST00000518140 LRRTM1Q86UE6 522 aa20.55■□□□□ 0.88
SLIT3-204ENST00000518140 SNIP1Q8TAD8 396 aaKnown RBP20.55■□□□□ 0.88
SLIT3-204ENST00000518140 ASB5Q8WWX0 329 aa20.55■□□□□ 0.88
SLIT3-204ENST00000518140 C11orf54Q9H0W9 315 aaPredicted RBP20.55■□□□□ 0.88
SLIT3-204ENST00000518140 GPR35Q9HC97 309 aa20.55■□□□□ 0.88
SLIT3-204ENST00000518140 FREM1Q5H8C1 2179 aa20.54■□□□□ 0.88
SLIT3-204ENST00000518140 P2RY10O00398 339 aa20.54■□□□□ 0.88
SLIT3-204ENST00000518140 DLL1O00548 723 aa20.54■□□□□ 0.88
SLIT3-204ENST00000518140 TAF13Q15543 124 aa20.54■□□□□ 0.88
SLIT3-204ENST00000518140 CEACAM16Q2WEN9 425 aa20.54■□□□□ 0.88
SLIT3-204ENST00000518140 PYDC2Q56P42 97 aa20.54■□□□□ 0.88
SLIT3-204ENST00000518140 FAM27BQ5VT28 67 aa20.54■□□□□ 0.88
SLIT3-204ENST00000518140 MZT2AQ6P582 158 aa20.54■□□□□ 0.88
SLIT3-204ENST00000518140 CNIH2Q6PI25 160 aa20.54■□□□□ 0.88
SLIT3-204ENST00000518140 KLHL24Q6TFL4 600 aa20.54■□□□□ 0.88
SLIT3-204ENST00000518140 DNAAF1Q8NEP3 725 aa20.54■□□□□ 0.88
SLIT3-204ENST00000518140 OR5H6Q8NGV6 325 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms