RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 GZMMP51124 257 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 CCR8P51685 355 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 RABGGTBP53611 331 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 RPS25P62851 125 aaKnown RBP4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 SELENOWP63302 87 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 CRADDP78560 199 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 AKR1C1Q04828 323 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 SCAPQ12770 1279 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 PNRC1Q12796 327 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 TNFAIP1Q13829 316 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 TCEA2Q15560 299 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 RPE65Q16518 533 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 UGCGQ16739 394 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 ODF4Q2M2E3 257 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 PGGHGQ32M88 737 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 ACOT6Q3I5F7 207 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 SOHLH1Q5JUK2 328 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 C12orf73Q69YU5 71 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 MTFR2Q6P444 385 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 SFXN4Q6P4A7 337 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 DOK6Q6PKX4 331 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 DHRS11Q6UWP2 260 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 BTNL8Q6UX41 500 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 UNQ6494/PRO21346Q6UXR6 183 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 NRMQ8IXM6 262 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 SELENOHQ8IZQ5 122 aaKnown RBP4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 PGBD5Q8N414 524 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 PNKDQ8N490 385 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 TMEM156Q8N614 296 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 ARIH2OSQ8N7S6 290 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 FRMD1Q8N878 549 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 PTGR2Q8N8N7 351 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 MRPL43Q8N983 215 aaKnown RBP4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 OR4K17Q8NGC6 315 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 OR4D6Q8NGJ1 314 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 OR51L1Q8NGJ5 315 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 OR52I1Q8NGK6 324 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 OR5D16Q8NGK9 328 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 OR4A4PQ8NGN8 299 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 OR1P1Q8NH06 330 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 OR5B3Q8NH48 314 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 OR52J3Q8NH60 311 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 LYPD6BQ8NI32 183 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 ARRDC2Q8TBH0 407 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 DUSP19Q8WTR2 217 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 FAM222BQ8WU58 562 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 HSD17B8Q92506 261 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 ERGIC1Q969X5 290 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 ARRDC3Q96B67 414 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 SPSB1Q96BD6 273 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 SFRP2Q96HF1 295 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 AKR1E2Q96JD6 320 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 SLC41A2Q96JW4 573 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 TEX37Q96LM6 180 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 OR2V2Q96R30 315 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 IL4I1Q96RQ9 567 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 LYSMD1Q96S90 227 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 P2RX7Q99572 595 aaKnown RBP4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 KLHDC3Q9BQ90 382 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 CCDC3Q9BQI4 270 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 BOCQ9BWV1 1114 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 GLIS2Q9BZE0 524 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 CTDSP1Q9GZU7 261 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 SLCO5A1Q9H2Y9 848 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 HRH4Q9H3N8 390 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 C1orf198Q9H425 327 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 RBKSQ9H477 322 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 CST9LQ9H4G1 147 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 WFDC1Q9HC57 220 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 GBA2Q9HCG7 927 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 Q9N2J8 555 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 MYOZ2Q9NPC6 264 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 CA10Q9NS85 328 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 SEMA4GQ9NTN9 838 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 GPATCH2LQ9NWQ4 482 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 AURKAIP1Q9NWT8 199 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 FKBP11Q9NYL4 201 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 USP36Q9P275 1121 aaKnown RBP4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 SEMA5BQ9P283 1151 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 B3GAT1Q9P2W7 334 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 ZNF107Q9UII5 783 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 TUBD1Q9UJT1 453 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 UTS2RQ9UKP6 389 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 FLVCR2Q9UPI3 526 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 ST3GAL6Q9Y274 331 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 UBR2Q8IWV8 1755 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 SHANK3Q9BYB0 1731 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 ADAMTS7Q9UKP4 1686 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 AHDC1Q5TGY3 1603 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 TRBV24-1A0A075B6N3 115 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 TRBV5-3A0A0A0MS03 114 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 TRBV6-7A0A0A0MS04 114 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 TRBC2A0A5B9 178 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 CDHR4A6H8M9 788 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 TMEM235A6NFC5 223 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 ANKUB1A6NFN9 424 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 FAM183AA6NL82 134 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 C2CD4BA6NLJ0 364 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 ZNF716A6NP11 495 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 OR11H12B2RN74 326 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms