RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 LRRC38Q5VT99 294 aa-2.63□□□□□ -2.83
RNU6-539P-201ENST00000516665 SPATA1Q5VX52 437 aa-2.63□□□□□ -2.83
RNU6-539P-201ENST00000516665 Q6ZS92 163 aa-2.63□□□□□ -2.83
RNU6-539P-201ENST00000516665 TPRA1Q86W33 373 aa-2.63□□□□□ -2.83
RNU6-539P-201ENST00000516665 C3orf22Q8N5N4 141 aa-2.63□□□□□ -2.83
RNU6-539P-201ENST00000516665 OR10A7Q8NGE5 316 aa-2.63□□□□□ -2.83
RNU6-539P-201ENST00000516665 UBLCP1Q8WVY7 318 aaPredicted RBP-2.63□□□□□ -2.83
RNU6-539P-201ENST00000516665 ITLN2Q8WWU7 325 aaPredicted RBP-2.63□□□□□ -2.83
RNU6-539P-201ENST00000516665 UPRTQ96BW1 309 aa-2.63□□□□□ -2.83
RNU6-539P-201ENST00000516665 EPSTI1Q96J88 318 aa-2.63□□□□□ -2.83
RNU6-539P-201ENST00000516665 SLC25A23Q9BV35 468 aa-2.63□□□□□ -2.83
RNU6-539P-201ENST00000516665 ERVK-6Q9BXR3 956 aa-2.63□□□□□ -2.83
RNU6-539P-201ENST00000516665 KRT23Q9C075 422 aa-2.63□□□□□ -2.83
RNU6-539P-201ENST00000516665 SRD5A3Q9H8P0 318 aa-2.63□□□□□ -2.83
RNU6-539P-201ENST00000516665 PRSS16Q9NQE7 514 aa-2.63□□□□□ -2.83
RNU6-539P-201ENST00000516665 JPT1Q9UK76 154 aa-2.63□□□□□ -2.83
RNU6-539P-201ENST00000516665 TRAPPC1Q9Y5R8 145 aa-2.63□□□□□ -2.83
RNU6-539P-201ENST00000516665 USH1CQ9Y6N9 552 aa-2.63□□□□□ -2.83
RNU6-539P-201ENST00000516665 PKHD1P08F94 4074 aa-2.63□□□□□ -2.83
RNU6-539P-201ENST00000516665 VWFP04275 2813 aa-2.64□□□□□ -2.83
RNU6-539P-201ENST00000516665 CITO14578 2027 aa-2.64□□□□□ -2.83
RNU6-539P-201ENST00000516665 TRPM3Q9HCF6 1732 aaPredicted RBP-2.64□□□□□ -2.83
RNU6-539P-201ENST00000516665 DOPEY2Q9Y3R5 2298 aa-2.64□□□□□ -2.83
RNU6-539P-201ENST00000516665 IGLV3-22A0A075B6J6 115 aa-2.64□□□□□ -2.83
RNU6-539P-201ENST00000516665 BTBD17A6NE02 478 aa-2.64□□□□□ -2.83
RNU6-539P-201ENST00000516665 URADA6NGE7 173 aa-2.64□□□□□ -2.83
RNU6-539P-201ENST00000516665 ZNF705FA8MVS1 300 aaPredicted RBP-2.64□□□□□ -2.83
RNU6-539P-201ENST00000516665 A8MWL6 223 aa-2.64□□□□□ -2.83
RNU6-539P-201ENST00000516665 B4E171 279 aa-2.64□□□□□ -2.83
RNU6-539P-201ENST00000516665 F8W036 122 aa-2.64□□□□□ -2.83
RNU6-539P-201ENST00000516665 SLC22A1O15245 554 aa-2.64□□□□□ -2.83
RNU6-539P-201ENST00000516665 NVLO15381 856 aaKnown RBP-2.64□□□□□ -2.83
RNU6-539P-201ENST00000516665 CRPP02741 224 aa-2.64□□□□□ -2.83
RNU6-539P-201ENST00000516665 CTSLP07711 333 aa-2.64□□□□□ -2.83
RNU6-539P-201ENST00000516665 CD3GP09693 182 aa-2.64□□□□□ -2.83
RNU6-539P-201ENST00000516665 ALOX5APP20292 161 aa-2.64□□□□□ -2.83
RNU6-539P-201ENST00000516665 PRKACBP22694 351 aa-2.64□□□□□ -2.83
RNU6-539P-201ENST00000516665 PTPN6P29350 595 aa-2.64□□□□□ -2.83
RNU6-539P-201ENST00000516665 RNASE4P34096 147 aaKnown RBP-2.64□□□□□ -2.83
RNU6-539P-201ENST00000516665 TSPAN7P41732 249 aa-2.64□□□□□ -2.83
RNU6-539P-201ENST00000516665 MAP2K4P45985 399 aa-2.64□□□□□ -2.83
RNU6-539P-201ENST00000516665 CASP9P55211 416 aa-2.64□□□□□ -2.83
RNU6-539P-201ENST00000516665 HSD17B7P56937 341 aa-2.64□□□□□ -2.83
RNU6-539P-201ENST00000516665 HYAL4Q2M3T9 481 aa-2.64□□□□□ -2.83
RNU6-539P-201ENST00000516665 MAJINQ3KP22 176 aa-2.64□□□□□ -2.83
RNU6-539P-201ENST00000516665 PTPN20Q4JDL3 420 aa-2.64□□□□□ -2.83
RNU6-539P-201ENST00000516665 TCEAL5Q5H9L2 206 aa-2.64□□□□□ -2.83
RNU6-539P-201ENST00000516665 C9orf152Q5JTZ5 239 aa-2.64□□□□□ -2.83
RNU6-539P-201ENST00000516665 C10orf62Q5T681 223 aaPredicted RBP-2.64□□□□□ -2.83
RNU6-539P-201ENST00000516665 CASC4Q6P4E1 433 aa-2.64□□□□□ -2.83
RNU6-539P-201ENST00000516665 CD300LGQ6UXG3 332 aa-2.64□□□□□ -2.83
RNU6-539P-201ENST00000516665 SPATA21Q7Z572 469 aa-2.64□□□□□ -2.83
RNU6-539P-201ENST00000516665 ADCK2Q7Z695 626 aa-2.64□□□□□ -2.83
RNU6-539P-201ENST00000516665 OR5T3Q8NGG3 340 aa-2.64□□□□□ -2.83
RNU6-539P-201ENST00000516665 OR1J4Q8NGS1 313 aa-2.64□□□□□ -2.83
RNU6-539P-201ENST00000516665 OR4A16Q8NH70 328 aa-2.64□□□□□ -2.83
RNU6-539P-201ENST00000516665 MRPS31Q92665 395 aaKnown RBP-2.64□□□□□ -2.83
RNU6-539P-201ENST00000516665 TCEAL3Q969E4 200 aa-2.64□□□□□ -2.83
RNU6-539P-201ENST00000516665 SLC25A36Q96CQ1 311 aa-2.64□□□□□ -2.83
RNU6-539P-201ENST00000516665 LINC00526Q96FQ7 95 aa-2.64□□□□□ -2.83
RNU6-539P-201ENST00000516665 CNDP2Q96KP4 475 aaKnown RBP-2.64□□□□□ -2.83
RNU6-539P-201ENST00000516665 PPP1R36Q96LQ0 422 aa-2.64□□□□□ -2.83
RNU6-539P-201ENST00000516665 RPF2Q9H7B2 306 aaKnown RBP-2.64□□□□□ -2.83
RNU6-539P-201ENST00000516665 OLA1Q9NTK5 396 aaKnown RBP-2.64□□□□□ -2.83
RNU6-539P-201ENST00000516665 C20orf96Q9NUD7 363 aaPredicted RBP-2.64□□□□□ -2.83
RNU6-539P-201ENST00000516665 NUDT15Q9NV35 164 aa-2.64□□□□□ -2.83
RNU6-539P-201ENST00000516665 GEMIN8Q9NWZ8 242 aaKnown RBP-2.64□□□□□ -2.83
RNU6-539P-201ENST00000516665 NSMCE4AQ9NXX6 385 aa-2.64□□□□□ -2.83
RNU6-539P-201ENST00000516665 MRPL39Q9NYK5 338 aaKnown RBP-2.64□□□□□ -2.83
RNU6-539P-201ENST00000516665 ZFP30Q9Y2G7 519 aa-2.64□□□□□ -2.83
RNU6-539P-201ENST00000516665 TMEM98Q9Y2Y6 226 aa-2.64□□□□□ -2.83
RNU6-539P-201ENST00000516665 CAB39Q9Y376 341 aaPredicted RBP-2.64□□□□□ -2.83
RNU6-539P-201ENST00000516665 SHROOM4Q9ULL8 1493 aa-2.65□□□□□ -2.83
RNU6-539P-201ENST00000516665 RAD54L2Q9Y4B4 1467 aa-2.65□□□□□ -2.83
RNU6-539P-201ENST00000516665 MED12LQ86YW9 2145 aa-2.65□□□□□ -2.83
RNU6-539P-201ENST00000516665 FANCIQ9NVI1 1328 aa-2.65□□□□□ -2.83
RNU6-539P-201ENST00000516665 A0A087X0M5 115 aa-2.65□□□□□ -2.83
RNU6-539P-201ENST00000516665 TRAV39A0A0B4J263 110 aa-2.65□□□□□ -2.83
RNU6-539P-201ENST00000516665 A0A1B0GX30 115 aa-2.65□□□□□ -2.83
RNU6-539P-201ENST00000516665 TNFRSF11BO00300 401 aa-2.65□□□□□ -2.83
RNU6-539P-201ENST00000516665 CHMP2AO43633 222 aa-2.65□□□□□ -2.83
RNU6-539P-201ENST00000516665 SYNGR4O95473 234 aa-2.65□□□□□ -2.83
RNU6-539P-201ENST00000516665 RLN1P04808 185 aa-2.65□□□□□ -2.83
RNU6-539P-201ENST00000516665 BCKDHBP21953 392 aa-2.65□□□□□ -2.83
RNU6-539P-201ENST00000516665 PCK1P35558 622 aa-2.65□□□□□ -2.83
RNU6-539P-201ENST00000516665 MAGEA1P43355 309 aa-2.65□□□□□ -2.83
RNU6-539P-201ENST00000516665 NCBP1Q09161 790 aaKnown RBP-2.65□□□□□ -2.83
RNU6-539P-201ENST00000516665 STK4Q13043 487 aa-2.65□□□□□ -2.83
RNU6-539P-201ENST00000516665 RCAN2Q14206 197 aa-2.65□□□□□ -2.83
RNU6-539P-201ENST00000516665 PSG3Q16557 428 aa-2.65□□□□□ -2.83
RNU6-539P-201ENST00000516665 METAP1DQ6UB28 335 aaPredicted RBP-2.65□□□□□ -2.83
RNU6-539P-201ENST00000516665 DDIT4LQ96D03 193 aa-2.65□□□□□ -2.83
RNU6-539P-201ENST00000516665 BTN2A3PQ96KV6 586 aa-2.65□□□□□ -2.83
RNU6-539P-201ENST00000516665 VPS35Q96QK1 796 aa-2.65□□□□□ -2.83
RNU6-539P-201ENST00000516665 PEBP4Q96S96 227 aa-2.65□□□□□ -2.83
RNU6-539P-201ENST00000516665 SEC62Q99442 399 aaKnown RBP-2.65□□□□□ -2.83
RNU6-539P-201ENST00000516665 CBWD1Q9BRT8 395 aa-2.65□□□□□ -2.83
RNU6-539P-201ENST00000516665 SLC35A5Q9BS91 424 aa-2.65□□□□□ -2.83
RNU6-539P-201ENST00000516665 ZNF426Q9BUY5 554 aa-2.65□□□□□ -2.83
RNU6-539P-201ENST00000516665 HOOK1Q9UJC3 728 aaKnown RBP-2.65□□□□□ -2.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms