RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 ATG16L2Q8NAA4 619 aa11.58□□□□□ -0.56
TCOF1-215ENST00000515516 OR2AJ1Q8NGZ0 328 aa11.58□□□□□ -0.56
TCOF1-215ENST00000515516 OR4K13Q8NH42 304 aa11.58□□□□□ -0.56
TCOF1-215ENST00000515516 APOBEC3DQ96AK3 386 aaPredicted RBP11.58□□□□□ -0.56
TCOF1-215ENST00000515516 SAMD8Q96LT4 415 aa11.58□□□□□ -0.56
TCOF1-215ENST00000515516 TSSK2Q96PF2 358 aa11.58□□□□□ -0.56
TCOF1-215ENST00000515516 NMNAT3Q96T66 252 aa11.58□□□□□ -0.56
TCOF1-215ENST00000515516 COQ7Q99807 217 aa11.58□□□□□ -0.56
TCOF1-215ENST00000515516 HDHD2Q9H0R4 259 aa11.58□□□□□ -0.56
TCOF1-215ENST00000515516 POFUT1Q9H488 388 aa11.58□□□□□ -0.56
TCOF1-215ENST00000515516 PTTG3PQ9NZH4 202 aa11.58□□□□□ -0.56
TCOF1-215ENST00000515516 NPTNQ9Y639 398 aa11.58□□□□□ -0.56
TCOF1-215ENST00000515516 CUBNO60494 3623 aa11.57□□□□□ -0.56
TCOF1-215ENST00000515516 A0A0A6YYJ9 748 aa11.57□□□□□ -0.56
TCOF1-215ENST00000515516 J3QLI3 93 aa11.57□□□□□ -0.56
TCOF1-215ENST00000515516 DEAF1O75398 565 aaPredicted RBP11.57□□□□□ -0.56
TCOF1-215ENST00000515516 GPANK1O95872 356 aa11.57□□□□□ -0.56
TCOF1-215ENST00000515516 DBHP09172 617 aa11.57□□□□□ -0.56
TCOF1-215ENST00000515516 HIST1H1CP16403 213 aaKnown RBP11.57□□□□□ -0.56
TCOF1-215ENST00000515516 GATA3P23771 443 aa11.57□□□□□ -0.56
TCOF1-215ENST00000515516 TSPAN31Q12999 210 aa11.57□□□□□ -0.56
TCOF1-215ENST00000515516 MEP1BQ16820 701 aa11.57□□□□□ -0.56
TCOF1-215ENST00000515516 OR6V1Q8N148 313 aa11.57□□□□□ -0.56
TCOF1-215ENST00000515516 KLHL36Q8N4N3 616 aa11.57□□□□□ -0.56
TCOF1-215ENST00000515516 SPICQ8N5J4 248 aa11.57□□□□□ -0.56
TCOF1-215ENST00000515516 OR52L1Q8NGH7 329 aa11.57□□□□□ -0.56
TCOF1-215ENST00000515516 ZNF418Q8TF45 676 aaPredicted RBP11.57□□□□□ -0.56
TCOF1-215ENST00000515516 ZNF582Q96NG8 517 aaPredicted RBP11.57□□□□□ -0.56
TCOF1-215ENST00000515516 PITX2Q99697 317 aa11.57□□□□□ -0.56
TCOF1-215ENST00000515516 RPRD1BQ9NQG5 326 aaKnown RBP11.57□□□□□ -0.56
TCOF1-215ENST00000515516 TMEM106BQ9NUM4 274 aa11.57□□□□□ -0.56
TCOF1-215ENST00000515516 IL19Q9UHD0 177 aa11.57□□□□□ -0.56
TCOF1-215ENST00000515516 PPP1R3CQ9UQK1 317 aa11.57□□□□□ -0.56
TCOF1-215ENST00000515516 YLPM1P49750 1951 aaKnown RBP11.57□□□□□ -0.56
TCOF1-215ENST00000515516 MXRA5Q9NR99 2828 aa11.56□□□□□ -0.56
TCOF1-215ENST00000515516 IGLV1-36A0A0B4J1U3 117 aa11.56□□□□□ -0.56
TCOF1-215ENST00000515516 TNFRSF11BO00300 401 aa11.56□□□□□ -0.56
TCOF1-215ENST00000515516 DCTN6O00399 190 aa11.56□□□□□ -0.56
TCOF1-215ENST00000515516 FOXH1O75593 365 aa11.56□□□□□ -0.56
TCOF1-215ENST00000515516 ZNF823P16415 610 aa11.56□□□□□ -0.56
TCOF1-215ENST00000515516 SELEP16581 610 aa11.56□□□□□ -0.56
TCOF1-215ENST00000515516 GSSP48637 474 aa11.56□□□□□ -0.56
TCOF1-215ENST00000515516 COX10Q12887 443 aa11.56□□□□□ -0.56
TCOF1-215ENST00000515516 ECH1Q13011 328 aa11.56□□□□□ -0.56
TCOF1-215ENST00000515516 RPL13AP3Q6NVV1 102 aa11.56□□□□□ -0.56
TCOF1-215ENST00000515516 CORO6Q6QEF8 472 aa11.56□□□□□ -0.56
TCOF1-215ENST00000515516 CYP2R1Q6VVX0 501 aa11.56□□□□□ -0.56
TCOF1-215ENST00000515516 OR5AS1Q8N127 324 aa11.56□□□□□ -0.56
TCOF1-215ENST00000515516 OR52E2Q8NGJ4 325 aa11.56□□□□□ -0.56
TCOF1-215ENST00000515516 OR13G1Q8NGZ3 307 aa11.56□□□□□ -0.56
TCOF1-215ENST00000515516 HCAR1Q9BXC0 346 aa11.56□□□□□ -0.56
TCOF1-215ENST00000515516 G6PC2Q9NQR9 355 aa11.56□□□□□ -0.56
TCOF1-215ENST00000515516 LHFPL6Q9Y693 200 aa11.56□□□□□ -0.56
TCOF1-215ENST00000515516 MALRD1Q5VYJ5 2156 aa11.55□□□□□ -0.56
TCOF1-215ENST00000515516 LOC105371242A0A075B767 164 aa11.55□□□□□ -0.56
TCOF1-215ENST00000515516 B2RBV5 119 aa11.55□□□□□ -0.56
TCOF1-215ENST00000515516 IFNL4K9M1U5 179 aa11.55□□□□□ -0.56
TCOF1-215ENST00000515516 HAX1O00165 279 aa11.55□□□□□ -0.56
TCOF1-215ENST00000515516 SRP9P49458 86 aaKnown RBP11.55□□□□□ -0.56
TCOF1-215ENST00000515516 HIST1H3AP68431 136 aa11.55□□□□□ -0.56
TCOF1-215ENST00000515516 LCN2P80188 198 aa11.55□□□□□ -0.56
TCOF1-215ENST00000515516 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.55□□□□□ -0.56
TCOF1-215ENST00000515516 MALLQ13021 153 aa11.55□□□□□ -0.56
TCOF1-215ENST00000515516 HLXQ14774 488 aaPredicted RBP11.55□□□□□ -0.56
TCOF1-215ENST00000515516 SPRNQ5BIV9 151 aa11.55□□□□□ -0.56
TCOF1-215ENST00000515516 CLEC12AQ5QGZ9 265 aa11.55□□□□□ -0.56
TCOF1-215ENST00000515516 SLC35F1Q5T1Q4 408 aa11.55□□□□□ -0.56
TCOF1-215ENST00000515516 HIST2H3PS2Q5TEC6 136 aa11.55□□□□□ -0.56
TCOF1-215ENST00000515516 OR2T2Q6IF00 324 aa11.55□□□□□ -0.56
TCOF1-215ENST00000515516 PGBD2Q6P3X8 592 aa11.55□□□□□ -0.56
TCOF1-215ENST00000515516 FBXW12Q6X9E4 464 aa11.55□□□□□ -0.56
TCOF1-215ENST00000515516 ZNF620Q6ZNG0 422 aa11.55□□□□□ -0.56
TCOF1-215ENST00000515516 Q6ZR03 302 aa11.55□□□□□ -0.56
TCOF1-215ENST00000515516 HIST2H3AQ71DI3 136 aa11.55□□□□□ -0.56
TCOF1-215ENST00000515516 ZBTB46Q86UZ6 589 aa11.55□□□□□ -0.56
TCOF1-215ENST00000515516 ARHGAP24Q8N264 748 aa11.55□□□□□ -0.56
TCOF1-215ENST00000515516 ZNF283Q8N7M2 679 aa11.55□□□□□ -0.56
TCOF1-215ENST00000515516 SDR9C7Q8NEX9 313 aa11.55□□□□□ -0.56
TCOF1-215ENST00000515516 SLC26A10Q8NG04 563 aa11.55□□□□□ -0.56
TCOF1-215ENST00000515516 OR8G5Q8NG78 346 aa11.55□□□□□ -0.56
TCOF1-215ENST00000515516 NANPQ8TBE9 248 aa11.55□□□□□ -0.56
TCOF1-215ENST00000515516 ITLN1Q8WWA0 313 aa11.55□□□□□ -0.56
TCOF1-215ENST00000515516 OR2V2Q96R30 315 aa11.55□□□□□ -0.56
TCOF1-215ENST00000515516 C7orf69Q9H7B7 122 aa11.55□□□□□ -0.56
TCOF1-215ENST00000515516 ACTR3BQ9P1U1 418 aa11.55□□□□□ -0.56
TCOF1-215ENST00000515516 CDH10Q9Y6N8 788 aa11.55□□□□□ -0.56
TCOF1-215ENST00000515516 SVEP1Q4LDE5 3571 aa11.55□□□□□ -0.56
TCOF1-215ENST00000515516 F5H5K5 113 aa11.54□□□□□ -0.56
TCOF1-215ENST00000515516 CCNB2O95067 398 aa11.54□□□□□ -0.56
TCOF1-215ENST00000515516 IGHV2-70P01814 119 aa11.54□□□□□ -0.56
TCOF1-215ENST00000515516 EPHA1P21709 976 aa11.54□□□□□ -0.56
TCOF1-215ENST00000515516 HMGA2P52926 109 aa11.54□□□□□ -0.56
TCOF1-215ENST00000515516 TPTEP56180 551 aa11.54□□□□□ -0.56
TCOF1-215ENST00000515516 BTG1P62324 171 aa11.54□□□□□ -0.56
TCOF1-215ENST00000515516 TMEM155Q4W5P6 130 aa11.54□□□□□ -0.56
TCOF1-215ENST00000515516 SLC18B1Q6NT16 456 aa11.54□□□□□ -0.56
TCOF1-215ENST00000515516 C1QL2Q7Z5L3 287 aa11.54□□□□□ -0.56
TCOF1-215ENST00000515516 DHFR2Q86XF0 187 aa11.54□□□□□ -0.56
TCOF1-215ENST00000515516 LINC00346Q8IVM7 164 aa11.54□□□□□ -0.56
TCOF1-215ENST00000515516 PROKR2Q8NFJ6 384 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms