RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 LYRM1O43325 122 aa13.2□□□□□ -0.3
VCAN-211ENST00000513984 ADRB1P08588 477 aa13.2□□□□□ -0.3
VCAN-211ENST00000513984 CELA3AP09093 270 aa13.2□□□□□ -0.3
VCAN-211ENST00000513984 HSD11B1P28845 292 aa13.2□□□□□ -0.3
VCAN-211ENST00000513984 MAGEA5P43359 124 aa13.2□□□□□ -0.3
VCAN-211ENST00000513984 INPP1P49441 399 aa13.2□□□□□ -0.3
VCAN-211ENST00000513984 ZNF84P51523 738 aa13.2□□□□□ -0.3
VCAN-211ENST00000513984 GRB2P62993 217 aaKnown RBP13.2□□□□□ -0.3
VCAN-211ENST00000513984 ENDOGQ14249 297 aaKnown RBP13.2□□□□□ -0.3
VCAN-211ENST00000513984 SGCAQ16586 387 aa13.2□□□□□ -0.3
VCAN-211ENST00000513984 MZT2BQ6NZ67 158 aa13.2□□□□□ -0.3
VCAN-211ENST00000513984 TMEM251Q8N6I4 163 aa13.2□□□□□ -0.3
VCAN-211ENST00000513984 CHAC2Q8WUX2 184 aa13.2□□□□□ -0.3
VCAN-211ENST00000513984 HDHD2Q9H0R4 259 aa13.2□□□□□ -0.3
VCAN-211ENST00000513984 DDX28Q9NUL7 540 aaKnown RBP13.2□□□□□ -0.3
VCAN-211ENST00000513984 TAS2R4Q9NYW5 299 aa13.2□□□□□ -0.3
VCAN-211ENST00000513984 BOLA2-SMG1P6H3BVE0 249 aa13.19□□□□□ -0.3
VCAN-211ENST00000513984 SLC17A2O00624 439 aa13.19□□□□□ -0.3
VCAN-211ENST00000513984 GSTZ1O43708 216 aaPredicted RBP13.19□□□□□ -0.3
VCAN-211ENST00000513984 LANCL1O43813 399 aa13.19□□□□□ -0.3
VCAN-211ENST00000513984 FAM157BP0CG42 384 aa13.19□□□□□ -0.3
VCAN-211ENST00000513984 NTF4P34130 210 aa13.19□□□□□ -0.3
VCAN-211ENST00000513984 MEOX1P50221 254 aa13.19□□□□□ -0.3
VCAN-211ENST00000513984 CLDN18P56856 261 aa13.19□□□□□ -0.3
VCAN-211ENST00000513984 HIST1H3AP68431 136 aa13.19□□□□□ -0.3
VCAN-211ENST00000513984 MRPS34P82930 218 aaKnown RBP13.19□□□□□ -0.3
VCAN-211ENST00000513984 TAF13Q15543 124 aa13.19□□□□□ -0.3
VCAN-211ENST00000513984 HIST2H3PS2Q5TEC6 136 aa13.19□□□□□ -0.3
VCAN-211ENST00000513984 FAM166AQ6J272 317 aa13.19□□□□□ -0.3
VCAN-211ENST00000513984 HIST2H3AQ71DI3 136 aa13.19□□□□□ -0.3
VCAN-211ENST00000513984 GALNTL5Q7Z4T8 443 aa13.19□□□□□ -0.3
VCAN-211ENST00000513984 VASH2Q86V25 355 aa13.19□□□□□ -0.3
VCAN-211ENST00000513984 HAVCR1Q96D42 359 aa13.19□□□□□ -0.3
VCAN-211ENST00000513984 FAM166BA8MTA8 275 aa13.18□□□□□ -0.3
VCAN-211ENST00000513984 KLRC4-KLRK1H3BQV0 150 aa13.18□□□□□ -0.3
VCAN-211ENST00000513984 EEF1E1O43324 174 aaKnown RBP13.18□□□□□ -0.3
VCAN-211ENST00000513984 DOK2O60496 412 aa13.18□□□□□ -0.3
VCAN-211ENST00000513984 ITGA5P08648 1049 aa13.18□□□□□ -0.3
VCAN-211ENST00000513984 CEACAM1P13688 526 aa13.18□□□□□ -0.3
VCAN-211ENST00000513984 ZNF708P17019 499 aa13.18□□□□□ -0.3
VCAN-211ENST00000513984 CTSSP25774 331 aa13.18□□□□□ -0.3
VCAN-211ENST00000513984 KIR2DL3P43628 341 aa13.18□□□□□ -0.3
VCAN-211ENST00000513984 ZNF57Q68EA5 555 aaPredicted RBP13.18□□□□□ -0.3
VCAN-211ENST00000513984 DRAXINQ8NBI3 349 aaPredicted RBP13.18□□□□□ -0.3
VCAN-211ENST00000513984 DUSP18Q8NEJ0 188 aa13.18□□□□□ -0.3
VCAN-211ENST00000513984 GJC3Q8NFK1 279 aa13.18□□□□□ -0.3
VCAN-211ENST00000513984 SYNPRQ8TBG9 265 aa13.18□□□□□ -0.3
VCAN-211ENST00000513984 ENKURQ8TC29 256 aa13.18□□□□□ -0.3
VCAN-211ENST00000513984 YIPF5Q969M3 257 aa13.18□□□□□ -0.3
VCAN-211ENST00000513984 ZNF845Q96IR2 970 aaPredicted RBP13.18□□□□□ -0.3
VCAN-211ENST00000513984 RBM24Q9BX46 236 aaKnown RBP13.18□□□□□ -0.3
VCAN-211ENST00000513984 ZNF275Q9NSD4 429 aaPredicted RBP13.18□□□□□ -0.3
VCAN-211ENST00000513984 ZNF292O60281 2723 aa13.18□□□□□ -0.3
VCAN-211ENST00000513984 MEGF11A6BM72 1044 aa13.18□□□□□ -0.3
VCAN-211ENST00000513984 TM4SF5O14894 197 aa13.18□□□□□ -0.3
VCAN-211ENST00000513984 CD46P15529 392 aa13.18□□□□□ -0.3
VCAN-211ENST00000513984 MNDAP41218 407 aa13.18□□□□□ -0.3
VCAN-211ENST00000513984 ART1P52961 327 aa13.18□□□□□ -0.3
VCAN-211ENST00000513984 PLGLB1Q02325 96 aa13.18□□□□□ -0.3
VCAN-211ENST00000513984 GLT8D1Q68CQ7 371 aa13.18□□□□□ -0.3
VCAN-211ENST00000513984 AAED1Q7RTV5 226 aa13.18□□□□□ -0.3
VCAN-211ENST00000513984 TMPRSS7Q7RTY8 843 aa13.18□□□□□ -0.3
VCAN-211ENST00000513984 ZFP62Q8NB50 900 aaPredicted RBP13.18□□□□□ -0.3
VCAN-211ENST00000513984 SMIM4Q8WVI0 70 aa13.18□□□□□ -0.3
VCAN-211ENST00000513984 HAS2Q92819 552 aa13.18□□□□□ -0.3
VCAN-211ENST00000513984 TMEM45BQ96B21 275 aa13.18□□□□□ -0.3
VCAN-211ENST00000513984 S100A16Q96FQ6 103 aaKnown RBP13.18□□□□□ -0.3
VCAN-211ENST00000513984 SCMH1Q96GD3 660 aa13.18□□□□□ -0.3
VCAN-211ENST00000513984 SLC6A15Q9H2J7 730 aa13.18□□□□□ -0.3
VCAN-211ENST00000513984 IGKV3D-15A0A087WSY6 115 aa13.17□□□□□ -0.3
VCAN-211ENST00000513984 A6NL46 340 aa13.17□□□□□ -0.3
VCAN-211ENST00000513984 SYT7O43581 403 aa13.17□□□□□ -0.3
VCAN-211ENST00000513984 SULT1B1O43704 296 aa13.17□□□□□ -0.3
VCAN-211ENST00000513984 LMX1BO60663 402 aa13.17□□□□□ -0.3
VCAN-211ENST00000513984 TPPPO94811 219 aa13.17□□□□□ -0.3
VCAN-211ENST00000513984 CX3CR1P49238 355 aa13.17□□□□□ -0.3
VCAN-211ENST00000513984 PRKXP51817 358 aa13.17□□□□□ -0.3
VCAN-211ENST00000513984 ZNF121P58317 390 aaPredicted RBP13.17□□□□□ -0.3
VCAN-211ENST00000513984 DGCR2P98153 550 aa13.17□□□□□ -0.3
VCAN-211ENST00000513984 RAB11BQ15907 218 aa13.17□□□□□ -0.3
VCAN-211ENST00000513984 RIPPLY2Q5TAB7 128 aa13.17□□□□□ -0.3
VCAN-211ENST00000513984 FAM27BQ5VT28 67 aa13.17□□□□□ -0.3
VCAN-211ENST00000513984 UBE2J2Q8N2K1 259 aa13.17□□□□□ -0.3
VCAN-211ENST00000513984 GPR137CQ8N3F9 429 aa13.17□□□□□ -0.3
VCAN-211ENST00000513984 PLPP7Q8NBV4 271 aa13.17□□□□□ -0.3
VCAN-211ENST00000513984 CPT1CQ8TCG5 803 aa13.17□□□□□ -0.3
VCAN-211ENST00000513984 ABHD3Q8WU67 409 aa13.17□□□□□ -0.3
VCAN-211ENST00000513984 ZNF775Q96BV0 537 aaPredicted RBP13.17□□□□□ -0.3
VCAN-211ENST00000513984 ZNF837Q96EG3 531 aaPredicted RBP13.17□□□□□ -0.3
VCAN-211ENST00000513984 ZFP3Q96NJ6 502 aa13.17□□□□□ -0.3
VCAN-211ENST00000513984 LRFN3Q9BTN0 628 aa13.17□□□□□ -0.3
VCAN-211ENST00000513984 IRF2BPLQ9H1B7 796 aa13.17□□□□□ -0.3
VCAN-211ENST00000513984 MMP28Q9H239 520 aa13.17□□□□□ -0.3
VCAN-211ENST00000513984 ZNF552Q9H707 407 aaPredicted RBP13.17□□□□□ -0.3
VCAN-211ENST00000513984 NPAP1Q9NZP6 1156 aa13.17□□□□□ -0.3
VCAN-211ENST00000513984 MRPS7Q9Y2R9 242 aaKnown RBP13.17□□□□□ -0.3
VCAN-211ENST00000513984 ARHGAP21Q5T5U3 1957 aa13.17□□□□□ -0.3
VCAN-211ENST00000513984 A0A1B0GTI1 187 aa13.16□□□□□ -0.3
VCAN-211ENST00000513984 LOC390937A0A1W2PQ73 354 aa13.16□□□□□ -0.3
VCAN-211ENST00000513984 NKX2-8O15522 239 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms