RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 ATP6V1E1P36543 226 aa9.78□□□□□ -0.84
HTT-213ENST00000513806 BLVRAP53004 296 aa9.78□□□□□ -0.84
HTT-213ENST00000513806 CXCR4P61073 352 aa9.78□□□□□ -0.84
HTT-213ENST00000513806 ZNF85Q03923 595 aa9.78□□□□□ -0.84
HTT-213ENST00000513806 SNTB2Q13425 540 aaKnown RBP9.78□□□□□ -0.84
HTT-213ENST00000513806 IL18R1Q13478 541 aa9.78□□□□□ -0.84
HTT-213ENST00000513806 TBC1D28Q2M2D7 210 aa9.78□□□□□ -0.84
HTT-213ENST00000513806 MEDAGQ5VYS4 303 aa9.78□□□□□ -0.84
HTT-213ENST00000513806 RFPL4BQ6ZWI9 263 aa9.78□□□□□ -0.84
HTT-213ENST00000513806 DPPA2Q7Z7J5 298 aa9.78□□□□□ -0.84
HTT-213ENST00000513806 ALDH16A1Q8IZ83 802 aa9.78□□□□□ -0.84
HTT-213ENST00000513806 FAM169BQ8N8A8 192 aa9.78□□□□□ -0.84
HTT-213ENST00000513806 BPIFB6Q8NFQ5 453 aa9.78□□□□□ -0.84
HTT-213ENST00000513806 OR52I1Q8NGK6 324 aa9.78□□□□□ -0.84
HTT-213ENST00000513806 RFKQ969G6 155 aa9.78□□□□□ -0.84
HTT-213ENST00000513806 ZNF184Q99676 751 aaPredicted RBP9.78□□□□□ -0.84
HTT-213ENST00000513806 ATF6BQ99941 703 aa9.78□□□□□ -0.84
HTT-213ENST00000513806 TMEM204Q9BSN7 226 aa9.78□□□□□ -0.84
HTT-213ENST00000513806 COPS4Q9BT78 406 aa9.78□□□□□ -0.84
HTT-213ENST00000513806 YIPF3Q9GZM5 350 aa9.78□□□□□ -0.84
HTT-213ENST00000513806 BRD7Q9NPI1 651 aa9.78□□□□□ -0.84
HTT-213ENST00000513806 CHD3Q12873 2000 aaKnown RBP9.78□□□□□ -0.84
HTT-213ENST00000513806 APCP25054 2843 aa9.78□□□□□ -0.84
HTT-213ENST00000513806 CYSRT1A8MQ03 144 aa9.77□□□□□ -0.85
HTT-213ENST00000513806 J3QRE1 110 aa9.77□□□□□ -0.85
HTT-213ENST00000513806 MPZL2O60487 215 aa9.77□□□□□ -0.85
HTT-213ENST00000513806 SMPD2O60906 423 aa9.77□□□□□ -0.85
HTT-213ENST00000513806 FAM20BO75063 409 aa9.77□□□□□ -0.85
HTT-213ENST00000513806 TMCC2O75069 709 aa9.77□□□□□ -0.85
HTT-213ENST00000513806 ACSM4P0C7M7 580 aa9.77□□□□□ -0.85
HTT-213ENST00000513806 NR1H2P55055 460 aa9.77□□□□□ -0.85
HTT-213ENST00000513806 TAF13Q15543 124 aa9.77□□□□□ -0.85
HTT-213ENST00000513806 SNAI3Q3KNW1 292 aa9.77□□□□□ -0.85
HTT-213ENST00000513806 C3orf36Q3SXR2 165 aa9.77□□□□□ -0.85
HTT-213ENST00000513806 ZNF672Q499Z4 452 aaPredicted RBP9.77□□□□□ -0.85
HTT-213ENST00000513806 TMEM255AQ5JRV8 349 aa9.77□□□□□ -0.85
HTT-213ENST00000513806 LHFPL3Q86UP9 236 aa9.77□□□□□ -0.85
HTT-213ENST00000513806 LRP11Q86VZ4 500 aa9.77□□□□□ -0.85
HTT-213ENST00000513806 ABHD4Q8TB40 342 aa9.77□□□□□ -0.85
HTT-213ENST00000513806 FBLIM1Q8WUP2 373 aa9.77□□□□□ -0.85
HTT-213ENST00000513806 GGHQ92820 318 aa9.77□□□□□ -0.85
HTT-213ENST00000513806 PPP1R14AQ96A00 147 aa9.77□□□□□ -0.85
HTT-213ENST00000513806 C14orf79Q96F83 325 aa9.77□□□□□ -0.85
HTT-213ENST00000513806 Q96MT0 163 aa9.77□□□□□ -0.85
HTT-213ENST00000513806 COQ7Q99807 217 aa9.77□□□□□ -0.85
HTT-213ENST00000513806 ANKRD60Q9BZ19 345 aa9.77□□□□□ -0.85
HTT-213ENST00000513806 HDHD2Q9H0R4 259 aa9.77□□□□□ -0.85
HTT-213ENST00000513806 PLEKHF2Q9H8W4 249 aa9.77□□□□□ -0.85
HTT-213ENST00000513806 HAO2Q9NYQ3 351 aa9.77□□□□□ -0.85
HTT-213ENST00000513806 UBAP1Q9NZ09 502 aa9.77□□□□□ -0.85
HTT-213ENST00000513806 IKZF2Q9UKS7 526 aa9.77□□□□□ -0.85
HTT-213ENST00000513806 RAB26Q9ULW5 256 aa9.77□□□□□ -0.85
HTT-213ENST00000513806 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.77□□□□□ -0.854e-7■■■■■ 48
HTT-213ENST00000513806 EXOGQ9Y2C4 368 aaKnown RBP9.77□□□□□ -0.85
HTT-213ENST00000513806 LRP12Q9Y561 859 aa9.77□□□□□ -0.85
HTT-213ENST00000513806 ASH1LQ9NR48 2969 aaKnown RBP9.77□□□□□ -0.85
HTT-213ENST00000513806 POLQO75417 2590 aa9.76□□□□□ -0.85
HTT-213ENST00000513806 ZNF878C9JN71 531 aa9.76□□□□□ -0.85
HTT-213ENST00000513806 ZNF670-ZNF695F2Z2N8 137 aa9.76□□□□□ -0.85
HTT-213ENST00000513806 ABHD16AO95870 558 aa9.76□□□□□ -0.85
HTT-213ENST00000513806 CLPTM1O96005 669 aa9.76□□□□□ -0.85
HTT-213ENST00000513806 LCKP06239 509 aa9.76□□□□□ -0.85
HTT-213ENST00000513806 H2BFMP0C1H6 154 aa9.76□□□□□ -0.85
HTT-213ENST00000513806 NR4A1P22736 598 aa9.76□□□□□ -0.85
HTT-213ENST00000513806 OPRL1P41146 370 aa9.76□□□□□ -0.85
HTT-213ENST00000513806 SLC6A9P48067 706 aa9.76□□□□□ -0.85
HTT-213ENST00000513806 CX3CR1P49238 355 aa9.76□□□□□ -0.85
HTT-213ENST00000513806 NKX6-1P78426 367 aaPredicted RBP9.76□□□□□ -0.85
HTT-213ENST00000513806 ALKBH6Q3KRA9 238 aa9.76□□□□□ -0.85
HTT-213ENST00000513806 KRTAP27-1Q3LI81 207 aa9.76□□□□□ -0.85
HTT-213ENST00000513806 TP53I3Q53FA7 332 aa9.76□□□□□ -0.85
HTT-213ENST00000513806 C6orf141Q5SZD1 244 aa9.76□□□□□ -0.85
HTT-213ENST00000513806 ZNF322Q6U7Q0 402 aaPredicted RBP9.76□□□□□ -0.85
HTT-213ENST00000513806 KRT77Q7Z794 578 aa9.76□□□□□ -0.85
HTT-213ENST00000513806 ZNF283Q8N7M2 679 aa9.76□□□□□ -0.85
HTT-213ENST00000513806 OR1J1Q8NGS3 322 aa9.76□□□□□ -0.85
HTT-213ENST00000513806 RNF133Q8WVZ7 376 aa9.76□□□□□ -0.85
HTT-213ENST00000513806 C4orf45Q96LM5 186 aa9.76□□□□□ -0.85
HTT-213ENST00000513806 ELOVL3Q9HB03 270 aa9.76□□□□□ -0.85
HTT-213ENST00000513806 SLC24A3Q9HC58 644 aa9.76□□□□□ -0.85
HTT-213ENST00000513806 DDX28Q9NUL7 540 aaKnown RBP9.76□□□□□ -0.85
HTT-213ENST00000513806 CISD1Q9NZ45 108 aaKnown RBP9.76□□□□□ -0.85
HTT-213ENST00000513806 PTTG3PQ9NZH4 202 aa9.76□□□□□ -0.85
HTT-213ENST00000513806 MYEF2Q9P2K5 600 aaKnown RBP9.76□□□□□ -0.85
HTT-213ENST00000513806 MRM2Q9UI43 246 aaKnown RBP9.76□□□□□ -0.85
HTT-213ENST00000513806 STARD10Q9Y365 291 aa9.76□□□□□ -0.85
HTT-213ENST00000513806 HSPE1-MOB4S4R3N1 261 aa9.76□□□□□ -0.85
HTT-213ENST00000513806 SPG11Q96JI7 2443 aa9.76□□□□□ -0.85
HTT-213ENST00000513806 ITPR2Q14571 2701 aa9.76□□□□□ -0.85
HTT-213ENST00000513806 UNC79Q9P2D8 2635 aa9.75□□□□□ -0.85
HTT-213ENST00000513806 M0R135 149 aa9.75□□□□□ -0.85
HTT-213ENST00000513806 SLC1A7O00341 560 aa9.75□□□□□ -0.85
HTT-213ENST00000513806 HS3ST1O14792 307 aa9.75□□□□□ -0.85
HTT-213ENST00000513806 RPP14O95059 124 aaKnown RBP9.75□□□□□ -0.85
HTT-213ENST00000513806 PTHP01270 115 aa9.75□□□□□ -0.85
HTT-213ENST00000513806 LCATP04180 440 aa9.75□□□□□ -0.85
HTT-213ENST00000513806 COX5BP10606 129 aa9.75□□□□□ -0.85
HTT-213ENST00000513806 HSD11B1P28845 292 aa9.75□□□□□ -0.85
HTT-213ENST00000513806 SSTR2P30874 369 aa9.75□□□□□ -0.85
HTT-213ENST00000513806 MPV17P39210 176 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms