RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 COX10Q12887 443 aa9.24□□□□□ -0.93
RNF4-218ENST00000513284 VMACQ2NL98 169 aa9.24□□□□□ -0.93
RNF4-218ENST00000513284 ZNF404Q494X3 552 aa9.24□□□□□ -0.93
RNF4-218ENST00000513284 C10orf128Q5T292 105 aa9.24□□□□□ -0.93
RNF4-218ENST00000513284 FOXB2Q5VYV0 432 aa9.24□□□□□ -0.93
RNF4-218ENST00000513284 ERICH5Q6P6B1 374 aa9.24□□□□□ -0.93
RNF4-218ENST00000513284 ARL9Q6T311 187 aa9.24□□□□□ -0.93
RNF4-218ENST00000513284 GDPGP1Q6ZNW5 385 aa9.24□□□□□ -0.93
RNF4-218ENST00000513284 ZER1Q7Z7L7 766 aa9.24□□□□□ -0.93
RNF4-218ENST00000513284 ASB10Q8WXI3 467 aa9.24□□□□□ -0.93
RNF4-218ENST00000513284 NMD3Q96D46 503 aaKnown RBP9.24□□□□□ -0.93
RNF4-218ENST00000513284 PLEKHA8Q96JA3 519 aa9.24□□□□□ -0.93
RNF4-218ENST00000513284 C4orf45Q96LM5 186 aa9.24□□□□□ -0.93
RNF4-218ENST00000513284 ECSITQ9BQ95 431 aa9.24□□□□□ -0.93
RNF4-218ENST00000513284 TOR3AQ9H497 397 aa9.24□□□□□ -0.93
RNF4-218ENST00000513284 ELOVL3Q9HB03 270 aa9.24□□□□□ -0.93
RNF4-218ENST00000513284 FBLN5Q9UBX5 448 aa9.24□□□□□ -0.93
RNF4-218ENST00000513284 SH3GLB1Q9Y371 365 aa9.24□□□□□ -0.93
RNF4-218ENST00000513284 MED31Q9Y3C7 131 aa9.24□□□□□ -0.93
RNF4-218ENST00000513284 ZNF879B4DU55 563 aa9.23□□□□□ -0.93
RNF4-218ENST00000513284 FCN3O75636 299 aa9.23□□□□□ -0.93
RNF4-218ENST00000513284 TOX4O94842 621 aa9.23□□□□□ -0.93
RNF4-218ENST00000513284 LYPD3O95274 346 aa9.23□□□□□ -0.93
RNF4-218ENST00000513284 FSTL3O95633 263 aa9.23□□□□□ -0.93
RNF4-218ENST00000513284 F13BP05160 661 aa9.23□□□□□ -0.93
RNF4-218ENST00000513284 KITLGP21583 273 aa9.23□□□□□ -0.93
RNF4-218ENST00000513284 PSMB10P40306 273 aa9.23□□□□□ -0.93
RNF4-218ENST00000513284 ARHGDIAP52565 204 aa9.23□□□□□ -0.93
RNF4-218ENST00000513284 PCBD1P61457 104 aa9.23□□□□□ -0.93
RNF4-218ENST00000513284 ERVK-25P63136 954 aa9.23□□□□□ -0.93
RNF4-218ENST00000513284 MRPS34P82930 218 aaKnown RBP9.23□□□□□ -0.93
RNF4-218ENST00000513284 HOXA4Q00056 320 aaPredicted RBP9.23□□□□□ -0.93
RNF4-218ENST00000513284 MAPRE2Q15555 327 aa9.23□□□□□ -0.93
RNF4-218ENST00000513284 METTL21CQ5VZV1 264 aa9.23□□□□□ -0.93
RNF4-218ENST00000513284 CCDC80Q76M96 950 aa9.23□□□□□ -0.93
RNF4-218ENST00000513284 LYG1Q8N1E2 194 aa9.23□□□□□ -0.93
RNF4-218ENST00000513284 PPP1R35Q8TAP8 253 aa9.23□□□□□ -0.93
RNF4-218ENST00000513284 TMEM239Q8WW34 195 aa9.23□□□□□ -0.93
RNF4-218ENST00000513284 GATAD2BQ8WXI9 593 aa9.23□□□□□ -0.93
RNF4-218ENST00000513284 LHX4Q969G2 390 aa9.23□□□□□ -0.93
RNF4-218ENST00000513284 TAMM41Q96BW9 452 aa9.23□□□□□ -0.93
RNF4-218ENST00000513284 CMBLQ96DG6 245 aa9.23□□□□□ -0.93
RNF4-218ENST00000513284 WDFY2Q96P53 400 aa9.23□□□□□ -0.93
RNF4-218ENST00000513284 RBP7Q96R05 134 aa9.23□□□□□ -0.93
RNF4-218ENST00000513284 ALG12Q9BV10 488 aa9.23□□□□□ -0.93
RNF4-218ENST00000513284 TRIM15Q9C019 465 aa9.23□□□□□ -0.93
RNF4-218ENST00000513284 NDEL1Q9GZM8 345 aa9.23□□□□□ -0.93
RNF4-218ENST00000513284 SIRPDQ9H106 197 aa9.23□□□□□ -0.93
RNF4-218ENST00000513284 MAN2C1Q9NTJ4 1040 aa9.23□□□□□ -0.93
RNF4-218ENST00000513284 ARGLU1Q9NWB6 273 aaPredicted RBP9.23□□□□□ -0.93
RNF4-218ENST00000513284 CLN8Q9UBY8 286 aa9.23□□□□□ -0.93
RNF4-218ENST00000513284 STARD10Q9Y365 291 aa9.23□□□□□ -0.93
RNF4-218ENST00000513284 IGHV3-64DA0A0J9YX35 117 aa9.22□□□□□ -0.93
RNF4-218ENST00000513284 MEGF11A6BM72 1044 aa9.22□□□□□ -0.93
RNF4-218ENST00000513284 EDF1O60869 148 aaKnown RBP9.22□□□□□ -0.93
RNF4-218ENST00000513284 SLC2A10O95528 541 aa9.22□□□□□ -0.93
RNF4-218ENST00000513284 PPP1R3DO95685 299 aa9.22□□□□□ -0.93
RNF4-218ENST00000513284 NPPAP01160 153 aa9.22□□□□□ -0.93
RNF4-218ENST00000513284 THY1P04216 161 aa9.22□□□□□ -0.93
RNF4-218ENST00000513284 TNFSF4P23510 183 aa9.22□□□□□ -0.93
RNF4-218ENST00000513284 AQP2P41181 271 aa9.22□□□□□ -0.93
RNF4-218ENST00000513284 EFNB2P52799 333 aa9.22□□□□□ -0.93
RNF4-218ENST00000513284 UGT2B15P54855 530 aa9.22□□□□□ -0.93
RNF4-218ENST00000513284 ST3GAL3Q11203 375 aa9.22□□□□□ -0.93
RNF4-218ENST00000513284 SELPLGQ14242 412 aa9.22□□□□□ -0.93
RNF4-218ENST00000513284 SGCAQ16586 387 aa9.22□□□□□ -0.93
RNF4-218ENST00000513284 ALG10Q5BKT4 473 aa9.22□□□□□ -0.93
RNF4-218ENST00000513284 RBM45Q8IUH3 476 aaKnown RBP9.22□□□□□ -0.93
RNF4-218ENST00000513284 C19orf18Q8NEA5 215 aa9.22□□□□□ -0.93
RNF4-218ENST00000513284 OR8J3Q8NGG0 315 aa9.22□□□□□ -0.93
RNF4-218ENST00000513284 OR8B3Q8NGG8 313 aa9.22□□□□□ -0.93
RNF4-218ENST00000513284 OR4D11Q8NGI4 311 aa9.22□□□□□ -0.93
RNF4-218ENST00000513284 LIPHQ8WWY8 451 aa9.22□□□□□ -0.93
RNF4-218ENST00000513284 HAVCR1Q96D42 359 aa9.22□□□□□ -0.93
RNF4-218ENST00000513284 MEGF10Q96KG7 1140 aa9.22□□□□□ -0.93
RNF4-218ENST00000513284 OR8B2Q96RD0 313 aa9.22□□□□□ -0.93
RNF4-218ENST00000513284 PRSS27Q9BQR3 290 aa9.22□□□□□ -0.93
RNF4-218ENST00000513284 WACQ9BTA9 647 aa9.22□□□□□ -0.93
RNF4-218ENST00000513284 OR2H1Q9GZK4 316 aa9.22□□□□□ -0.93
RNF4-218ENST00000513284 SEMA6AQ9H2E6 1030 aa9.22□□□□□ -0.93
RNF4-218ENST00000513284 TXNIPQ9H3M7 391 aa9.22□□□□□ -0.93
RNF4-218ENST00000513284 MEPEQ9NQ76 525 aaPredicted RBP9.22□□□□□ -0.93
RNF4-218ENST00000513284 RIMS3Q9UJD0 308 aa9.22□□□□□ -0.93
RNF4-218ENST00000513284 NDRG4Q9ULP0 352 aaKnown RBP9.22□□□□□ -0.93
RNF4-218ENST00000513284 A0A0G2JND7 137 aa9.21□□□□□ -0.94
RNF4-218ENST00000513284 A6NIZ1 184 aa9.21□□□□□ -0.94
RNF4-218ENST00000513284 BBIP1A8MTZ0 92 aa9.21□□□□□ -0.94
RNF4-218ENST00000513284 PHYHO14832 338 aa9.21□□□□□ -0.94
RNF4-218ENST00000513284 ENSAO43768 121 aaKnown RBP9.21□□□□□ -0.94
RNF4-218ENST00000513284 SHOX2O60902 331 aaPredicted RBP9.21□□□□□ -0.94
RNF4-218ENST00000513284 GSTM3P21266 225 aa9.21□□□□□ -0.94
RNF4-218ENST00000513284 TUBG1P23258 451 aa9.21□□□□□ -0.94
RNF4-218ENST00000513284 TGFBR2P37173 567 aa9.21□□□□□ -0.94
RNF4-218ENST00000513284 RAP1BP61224 184 aa9.21□□□□□ -0.94
RNF4-218ENST00000513284 RAP1AP62834 184 aa9.21□□□□□ -0.94
RNF4-218ENST00000513284 COL10A1Q03692 680 aa9.21□□□□□ -0.94
RNF4-218ENST00000513284 ANKDD1AQ495B1 522 aa9.21□□□□□ -0.94
RNF4-218ENST00000513284 COQ5Q5HYK3 327 aa9.21□□□□□ -0.94
RNF4-218ENST00000513284 FAM27BQ5VT28 67 aa9.21□□□□□ -0.94
RNF4-218ENST00000513284 DHRS7BQ6IAN0 325 aaPredicted RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms