RNA–Protein interactions for RNA: ENST00000512844.5

CHD1-209, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-209ENST00000512844 A0A1W2PRM7 423 aa3.43□□□□□ -1.86
CHD1-209ENST00000512844 LRP5LA4QPB2 252 aa3.43□□□□□ -1.86
CHD1-209ENST00000512844 PSMB11A5LHX3 300 aa3.43□□□□□ -1.86
CHD1-209ENST00000512844 GOLGA8MH3BSY2 632 aa3.43□□□□□ -1.86
CHD1-209ENST00000512844 SIRPB1O00241 398 aa3.43□□□□□ -1.86
CHD1-209ENST00000512844 SCAMP2O15127 329 aaKnown RBP3.43□□□□□ -1.86
CHD1-209ENST00000512844 PSTPIP1O43586 416 aa3.43□□□□□ -1.86
CHD1-209ENST00000512844 TRAPPC3O43617 180 aa3.43□□□□□ -1.86
CHD1-209ENST00000512844 PRKAB2O43741 272 aa3.43□□□□□ -1.86
CHD1-209ENST00000512844 NPIPB7O75200 414 aa3.43□□□□□ -1.86
CHD1-209ENST00000512844 RBBP9O75884 186 aa3.43□□□□□ -1.86
CHD1-209ENST00000512844 B3GAT3O94766 335 aa3.43□□□□□ -1.86
CHD1-209ENST00000512844 CST4P01036 141 aa3.43□□□□□ -1.86
CHD1-209ENST00000512844 KITLGP21583 273 aa3.43□□□□□ -1.86
CHD1-209ENST00000512844 BGNP21810 368 aa3.43□□□□□ -1.86
CHD1-209ENST00000512844 HSPA13P48723 471 aa3.43□□□□□ -1.86
CHD1-209ENST00000512844 CDC34P49427 236 aaPredicted RBP3.43□□□□□ -1.86
CHD1-209ENST00000512844 EMP2P54851 167 aa3.43□□□□□ -1.86
CHD1-209ENST00000512844 ADARB1P78563 741 aaKnown RBP3.43□□□□□ -1.86
CHD1-209ENST00000512844 LCN2P80188 198 aa3.43□□□□□ -1.86
CHD1-209ENST00000512844 PITPNAQ00169 270 aa3.43□□□□□ -1.86
CHD1-209ENST00000512844 EWSR1Q01844 656 aaKnown RBP eCLIP3.43□□□□□ -1.86
CHD1-209ENST00000512844 TRIM16LQ309B1 348 aa3.43□□□□□ -1.86
CHD1-209ENST00000512844 TFDP3Q5H9I0 405 aa3.43□□□□□ -1.86
CHD1-209ENST00000512844 CDKL4Q5MAI5 379 aa3.43□□□□□ -1.86
CHD1-209ENST00000512844 GPR107Q5VW38 600 aa3.43□□□□□ -1.86
CHD1-209ENST00000512844 KHDRBS2Q5VWX1 349 aaKnown RBP3.43□□□□□ -1.86
CHD1-209ENST00000512844 MFSD14CQ5VZR4 134 aa3.43□□□□□ -1.86
CHD1-209ENST00000512844 ACOT7LQ6ZUV0 252 aa3.43□□□□□ -1.86
CHD1-209ENST00000512844 GDPD3Q7L5L3 318 aa3.43□□□□□ -1.86
CHD1-209ENST00000512844 HDDC2Q7Z4H3 204 aa3.43□□□□□ -1.86
CHD1-209ENST00000512844 APRG1Q8IVJ8 170 aa3.43□□□□□ -1.86
CHD1-209ENST00000512844 ZNF786Q8N393 782 aa3.43□□□□□ -1.86
CHD1-209ENST00000512844 ATP6V0D2Q8N8Y2 350 aa3.43□□□□□ -1.86
CHD1-209ENST00000512844 TTC29Q8NA56 475 aaPredicted RBP3.43□□□□□ -1.86
CHD1-209ENST00000512844 B3GNT7Q8NFL0 401 aa3.43□□□□□ -1.86
CHD1-209ENST00000512844 CA5BP1Q8WTZ4 195 aa3.43□□□□□ -1.86
CHD1-209ENST00000512844 CACNG8Q8WXS5 425 aa3.43□□□□□ -1.86
CHD1-209ENST00000512844 CXorf40BQ96DE9 158 aa3.43□□□□□ -1.86
CHD1-209ENST00000512844 TIMD4Q96H15 378 aa3.43□□□□□ -1.86
CHD1-209ENST00000512844 HIST1H4GQ99525 98 aa3.43□□□□□ -1.86
CHD1-209ENST00000512844 DCUN1D5Q9BTE7 237 aa3.43□□□□□ -1.86
CHD1-209ENST00000512844 RAB34Q9BZG1 259 aa3.43□□□□□ -1.86
CHD1-209ENST00000512844 DERL2Q9GZP9 239 aa3.43□□□□□ -1.86
CHD1-209ENST00000512844 PIGUQ9H490 435 aa3.43□□□□□ -1.86
CHD1-209ENST00000512844 NMRAL1Q9HBL8 299 aa3.43□□□□□ -1.86
CHD1-209ENST00000512844 SAMSN1Q9NSI8 373 aaKnown RBP3.43□□□□□ -1.86
CHD1-209ENST00000512844 SLC17A7Q9P2U7 560 aa3.43□□□□□ -1.86
CHD1-209ENST00000512844 ZNF282Q9UDV7 671 aaPredicted RBP3.43□□□□□ -1.86
CHD1-209ENST00000512844 KIF25Q9UIL4 384 aa3.43□□□□□ -1.86
CHD1-209ENST00000512844 NAGKQ9UJ70 344 aa3.43□□□□□ -1.86
CHD1-209ENST00000512844 PRG3Q9Y2Y8 225 aaPredicted RBP3.43□□□□□ -1.86
CHD1-209ENST00000512844 HYOU1Q9Y4L1 999 aa3.43□□□□□ -1.86
CHD1-209ENST00000512844 FADS3Q9Y5Q0 445 aa3.43□□□□□ -1.86
CHD1-209ENST00000512844 WSB1Q9Y6I7 421 aa3.43□□□□□ -1.86
CHD1-209ENST00000512844 MAP3K4Q9Y6R4 1608 aa3.43□□□□□ -1.86
CHD1-209ENST00000512844 MEGF6O75095 1541 aa3.43□□□□□ -1.86
CHD1-209ENST00000512844 PLCH2O75038 1416 aa3.43□□□□□ -1.86
CHD1-209ENST00000512844 USP42Q9H9J4 1324 aaKnown RBP3.43□□□□□ -1.86
CHD1-209ENST00000512844 FANCAO15360 1455 aa3.42□□□□□ -1.86
CHD1-209ENST00000512844 ERVK-7P63135 1459 aa3.42□□□□□ -1.86
CHD1-209ENST00000512844 H7C0C1 242 aa3.42□□□□□ -1.86
CHD1-209ENST00000512844 TAPBPO15533 448 aa3.42□□□□□ -1.86
CHD1-209ENST00000512844 ICOSLGO75144 302 aa3.42□□□□□ -1.86
CHD1-209ENST00000512844 NDUFS6O75380 124 aaKnown RBP3.42□□□□□ -1.86
CHD1-209ENST00000512844 ZNF189O75820 626 aaPredicted RBP3.42□□□□□ -1.86
CHD1-209ENST00000512844 DIRAS1O95057 198 aa3.42□□□□□ -1.86
CHD1-209ENST00000512844 VAPBO95292 243 aa3.42□□□□□ -1.86
CHD1-209ENST00000512844 AP2A1O95782 977 aa3.42□□□□□ -1.86
CHD1-209ENST00000512844 TMEM50AO95807 157 aa3.42□□□□□ -1.86
CHD1-209ENST00000512844 HLA-HP01893 362 aa3.42□□□□□ -1.86
CHD1-209ENST00000512844 HLA-DRAP01903 254 aa3.42□□□□□ -1.86
CHD1-209ENST00000512844 ANXA5P08758 320 aa3.42□□□□□ -1.86
CHD1-209ENST00000512844 GIPP09681 153 aaPredicted RBP3.42□□□□□ -1.86
CHD1-209ENST00000512844 OCM2P0CE71 109 aa3.42□□□□□ -1.86
CHD1-209ENST00000512844 HMGB2P26583 209 aaKnown RBP3.42□□□□□ -1.86
CHD1-209ENST00000512844 FGF9P31371 208 aaPredicted RBP3.42□□□□□ -1.86
CHD1-209ENST00000512844 FOXN2P32314 431 aa3.42□□□□□ -1.86
CHD1-209ENST00000512844 UGT2B10P36537 528 aa3.42□□□□□ -1.86
CHD1-209ENST00000512844 ARR3P36575 388 aa3.42□□□□□ -1.86
CHD1-209ENST00000512844 CDKN2CP42773 168 aa3.42□□□□□ -1.86
CHD1-209ENST00000512844 SLC1A2P43004 574 aa3.42□□□□□ -1.86
CHD1-209ENST00000512844 SLC1A1P43005 524 aa3.42□□□□□ -1.86
CHD1-209ENST00000512844 P2RY1P47900 373 aa3.42□□□□□ -1.86
CHD1-209ENST00000512844 UBE2G2P60604 165 aa3.42□□□□□ -1.86
CHD1-209ENST00000512844 HERVK_113P61574 105 aa3.42□□□□□ -1.86
CHD1-209ENST00000512844 REEP5Q00765 189 aa3.42□□□□□ -1.86
CHD1-209ENST00000512844 GOLGA7BQ2TAP0 167 aa3.42□□□□□ -1.86
CHD1-209ENST00000512844 C5orf47Q569G3 176 aa3.42□□□□□ -1.86
CHD1-209ENST00000512844 ZNF691Q5VV52 312 aa3.42□□□□□ -1.86
CHD1-209ENST00000512844 PRMT9Q6P2P2 845 aa3.42□□□□□ -1.86
CHD1-209ENST00000512844 TTC33Q6PID6 262 aaPredicted RBP3.42□□□□□ -1.86
CHD1-209ENST00000512844 LRRC31Q6UY01 552 aa3.42□□□□□ -1.86
CHD1-209ENST00000512844 PAGE2Q7Z2X7 111 aa3.42□□□□□ -1.86
CHD1-209ENST00000512844 SVOPLQ8N434 492 aa3.42□□□□□ -1.86
CHD1-209ENST00000512844 KIR3DL3Q8N743 410 aa3.42□□□□□ -1.86
CHD1-209ENST00000512844 OR6N2Q8NGY6 317 aa3.42□□□□□ -1.86
CHD1-209ENST00000512844 MAGEE2Q8TD90 523 aaPredicted RBP3.42□□□□□ -1.86
CHD1-209ENST00000512844 ESR2Q92731 530 aa3.42□□□□□ -1.86
CHD1-209ENST00000512844 FAM104AQ969W3 186 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms