RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 FSTP19883 344 aa13.36□□□□□ -0.27
SCLT1-209ENST00000511426 CFPP27918 469 aa13.36□□□□□ -0.27
SCLT1-209ENST00000511426 RANBP1P43487 201 aa13.36□□□□□ -0.27
SCLT1-209ENST00000511426 PPP3R1P63098 170 aa13.36□□□□□ -0.27
SCLT1-209ENST00000511426 PLEKHN1Q494U1 663 aaPredicted RBP13.36□□□□□ -0.27
SCLT1-209ENST00000511426 SLC36A2Q495M3 483 aa13.36□□□□□ -0.27
SCLT1-209ENST00000511426 ACSF3Q4G176 576 aaPredicted RBP13.36□□□□□ -0.27
SCLT1-209ENST00000511426 FBXW9Q5XUX1 488 aa13.36□□□□□ -0.27
SCLT1-209ENST00000511426 SFXN4Q6P4A7 337 aa13.36□□□□□ -0.27
SCLT1-209ENST00000511426 ZNF813Q6ZN06 617 aa13.36□□□□□ -0.27
SCLT1-209ENST00000511426 FAM214BQ7L5A3 538 aa13.36□□□□□ -0.27
SCLT1-209ENST00000511426 LINGO2Q7L985 606 aa13.36□□□□□ -0.27
SCLT1-209ENST00000511426 SLC16A14Q7RTX9 510 aa13.36□□□□□ -0.27
SCLT1-209ENST00000511426 TSEN15Q8WW01 171 aaKnown RBP13.36□□□□□ -0.27
SCLT1-209ENST00000511426 ITFG2Q969R8 447 aa13.36□□□□□ -0.27
SCLT1-209ENST00000511426 TMEM106AQ96A25 262 aa13.36□□□□□ -0.27
SCLT1-209ENST00000511426 ZNF837Q96EG3 531 aaPredicted RBP13.36□□□□□ -0.27
SCLT1-209ENST00000511426 PBOV1Q9GZY1 135 aa13.36□□□□□ -0.27
SCLT1-209ENST00000511426 PPIL3Q9H2H8 161 aaKnown RBP13.36□□□□□ -0.27
SCLT1-209ENST00000511426 ABRACLQ9P1F3 81 aa13.36□□□□□ -0.27
SCLT1-209ENST00000511426 CKLFQ9UBR5 152 aa13.36□□□□□ -0.27
SCLT1-209ENST00000511426 GTF2A1LQ9UNN4 478 aa13.36□□□□□ -0.27
SCLT1-209ENST00000511426 FOXJ3Q9UPW0 622 aa13.36□□□□□ -0.27
SCLT1-209ENST00000511426 DHDHQ9UQ10 334 aa13.36□□□□□ -0.27
SCLT1-209ENST00000511426 CMAHPQ9Y471 501 aa13.36□□□□□ -0.27
SCLT1-209ENST00000511426 FIGNL2A6NMB9 653 aa13.35□□□□□ -0.27
SCLT1-209ENST00000511426 CLEC2LP0C7M8 214 aa13.35□□□□□ -0.27
SCLT1-209ENST00000511426 COX5BP10606 129 aa13.35□□□□□ -0.27
SCLT1-209ENST00000511426 MPGP29372 298 aa13.35□□□□□ -0.27
SCLT1-209ENST00000511426 SCAND1P57086 179 aa13.35□□□□□ -0.27
SCLT1-209ENST00000511426 CCDC92Q53HC0 331 aaPredicted RBP13.35□□□□□ -0.27
SCLT1-209ENST00000511426 FAM27D1Q5T7N8 215 aa13.35□□□□□ -0.27
SCLT1-209ENST00000511426 ZNF324BQ6AW86 544 aaPredicted RBP13.35□□□□□ -0.27
SCLT1-209ENST00000511426 DRAM2Q6UX65 266 aa13.35□□□□□ -0.27
SCLT1-209ENST00000511426 CCDC190Q86UF4 302 aa13.35□□□□□ -0.27
SCLT1-209ENST00000511426 CCDC36Q8IYA8 594 aa13.35□□□□□ -0.27
SCLT1-209ENST00000511426 LRRC18Q8N456 261 aa13.35□□□□□ -0.27
SCLT1-209ENST00000511426 MFSD4AQ8N468 514 aa13.35□□□□□ -0.27
SCLT1-209ENST00000511426 OR6K3Q8NGY3 331 aa13.35□□□□□ -0.27
SCLT1-209ENST00000511426 FBXO17Q96EF6 278 aa13.35□□□□□ -0.27
SCLT1-209ENST00000511426 TRIB1Q96RU8 372 aa13.35□□□□□ -0.27
SCLT1-209ENST00000511426 ZNF391Q9UJN7 358 aa13.35□□□□□ -0.27
SCLT1-209ENST00000511426 SLC22A13Q9Y226 551 aa13.35□□□□□ -0.27
SCLT1-209ENST00000511426 RAXQ9Y2V3 346 aa13.35□□□□□ -0.27
SCLT1-209ENST00000511426 ALPK2Q86TB3 2170 aa13.35□□□□□ -0.27
SCLT1-209ENST00000511426 A0A0U1RQV5 110 aa13.34□□□□□ -0.27
SCLT1-209ENST00000511426 MBD3L4A6NDZ8 208 aaPredicted RBP13.34□□□□□ -0.27
SCLT1-209ENST00000511426 MBD3L3A6NE82 208 aaPredicted RBP13.34□□□□□ -0.27
SCLT1-209ENST00000511426 OR6C6A6NF89 314 aa13.34□□□□□ -0.27
SCLT1-209ENST00000511426 MBD3L5A6NJ08 208 aaPredicted RBP13.34□□□□□ -0.27
SCLT1-209ENST00000511426 PIN1P1O15428 100 aa13.34□□□□□ -0.27
SCLT1-209ENST00000511426 TTRP02766 147 aa13.34□□□□□ -0.27
SCLT1-209ENST00000511426 B4GALT1P15291 398 aa13.34□□□□□ -0.27
SCLT1-209ENST00000511426 CCL1P22362 96 aa13.34□□□□□ -0.27
SCLT1-209ENST00000511426 APEX1P27695 318 aaKnown RBP13.34□□□□□ -0.27
SCLT1-209ENST00000511426 CX3CR1P49238 355 aa13.34□□□□□ -0.27
SCLT1-209ENST00000511426 NUFIP2Q7Z417 695 aaKnown RBP13.34□□□□□ -0.27
SCLT1-209ENST00000511426 ZNF283Q8N7M2 679 aa13.34□□□□□ -0.27
SCLT1-209ENST00000511426 OR52H1Q8NGJ2 320 aa13.34□□□□□ -0.27
SCLT1-209ENST00000511426 MBD3L2Q8NHZ7 208 aaPredicted RBP13.34□□□□□ -0.27
SCLT1-209ENST00000511426 ASB5Q8WWX0 329 aa13.34□□□□□ -0.27
SCLT1-209ENST00000511426 EXTL1Q92935 676 aa13.34□□□□□ -0.27
SCLT1-209ENST00000511426 BOD1Q96IK1 185 aa13.34□□□□□ -0.27
SCLT1-209ENST00000511426 CMTM3Q96MX0 182 aa13.34□□□□□ -0.27
SCLT1-209ENST00000511426 SLC30A2Q9BRI3 323 aa13.34□□□□□ -0.27
SCLT1-209ENST00000511426 CLEC4AQ9UMR7 237 aa13.34□□□□□ -0.27
SCLT1-209ENST00000511426 SLC5A6Q9Y289 635 aa13.34□□□□□ -0.27
SCLT1-209ENST00000511426 A0A0G2JK05 382 aa13.34□□□□□ -0.27
SCLT1-209ENST00000511426 LOC107986453A0A1B0GWG9 222 aa13.34□□□□□ -0.27
SCLT1-209ENST00000511426 MEGF11A6BM72 1044 aa13.34□□□□□ -0.27
SCLT1-209ENST00000511426 K7EM74 188 aa13.34□□□□□ -0.27
SCLT1-209ENST00000511426 DVL2O14641 736 aa13.34□□□□□ -0.27
SCLT1-209ENST00000511426 RGS5O15539 181 aa13.34□□□□□ -0.27
SCLT1-209ENST00000511426 SYNGR3O43761 229 aa13.34□□□□□ -0.27
SCLT1-209ENST00000511426 SLC19A2O60779 497 aa13.34□□□□□ -0.27
SCLT1-209ENST00000511426 BMP4P12644 408 aa13.34□□□□□ -0.27
SCLT1-209ENST00000511426 CRYGSP22914 178 aa13.34□□□□□ -0.27
SCLT1-209ENST00000511426 PTBP1P26599 531 aaKnown RBP eCLIP13.34□□□□□ -0.27
SCLT1-209ENST00000511426 PPP5CP53041 499 aa13.34□□□□□ -0.27
SCLT1-209ENST00000511426 ZNF121P58317 390 aaPredicted RBP13.34□□□□□ -0.27
SCLT1-209ENST00000511426 TGFBR3Q03167 851 aa13.34□□□□□ -0.27
SCLT1-209ENST00000511426 KRTAP27-1Q3LI81 207 aa13.34□□□□□ -0.27
SCLT1-209ENST00000511426 METAP1DQ6UB28 335 aaPredicted RBP13.34□□□□□ -0.27
SCLT1-209ENST00000511426 NANOS1Q8WY41 292 aaKnown RBP13.34□□□□□ -0.27
SCLT1-209ENST00000511426 C10orf35Q96D05 121 aa13.34□□□□□ -0.27
SCLT1-209ENST00000511426 KCNS3Q9BQ31 491 aa13.34□□□□□ -0.27
SCLT1-209ENST00000511426 SLC17A5Q9NRA2 495 aa13.34□□□□□ -0.27
SCLT1-209ENST00000511426 A0A1B0GVI7 797 aa13.33□□□□□ -0.28
SCLT1-209ENST00000511426 TMEM8BA6NDV4 472 aa13.33□□□□□ -0.28
SCLT1-209ENST00000511426 M0R135 149 aa13.33□□□□□ -0.28
SCLT1-209ENST00000511426 AIPO00170 330 aa13.33□□□□□ -0.28
SCLT1-209ENST00000511426 DOK2O60496 412 aa13.33□□□□□ -0.28
SCLT1-209ENST00000511426 MMP7P09237 267 aaPredicted RBP13.33□□□□□ -0.28
SCLT1-209ENST00000511426 ACSM4P0C7M7 580 aa13.33□□□□□ -0.28
SCLT1-209ENST00000511426 EPXP11678 715 aa13.33□□□□□ -0.28
SCLT1-209ENST00000511426 HOXB1P14653 301 aaPredicted RBP13.33□□□□□ -0.28
SCLT1-209ENST00000511426 ZNF32P17041 273 aa13.33□□□□□ -0.28
SCLT1-209ENST00000511426 ARR3P36575 388 aa13.33□□□□□ -0.28
SCLT1-209ENST00000511426 TPTEP56180 551 aa13.33□□□□□ -0.28
SCLT1-209ENST00000511426 ARF1P84077 181 aaKnown RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms