RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 CDK5Q00535 292 aa11.94□□□□□ -0.5
DDX41-212ENST00000511040 GGTLC2Q14390 218 aa11.94□□□□□ -0.5
DDX41-212ENST00000511040 TSTQ16762 297 aaKnown RBP11.94□□□□□ -0.5
DDX41-212ENST00000511040 MBNL2Q5VZF2 373 aaKnown RBP11.94□□□□□ -0.5
DDX41-212ENST00000511040 PLBD1Q6P4A8 553 aa11.94□□□□□ -0.5
DDX41-212ENST00000511040 SNX33Q8WV41 574 aa11.94□□□□□ -0.5
DDX41-212ENST00000511040 MAP6Q96JE9 813 aa11.94□□□□□ -0.5
DDX41-212ENST00000511040 COQ7Q99807 217 aa11.94□□□□□ -0.5
DDX41-212ENST00000511040 PIMREGQ9BSJ6 248 aa11.94□□□□□ -0.5
DDX41-212ENST00000511040 HDHD2Q9H0R4 259 aa11.94□□□□□ -0.5
DDX41-212ENST00000511040 OR51V1Q9H2C8 321 aa11.94□□□□□ -0.5
DDX41-212ENST00000511040 PNRC2Q9NPJ4 139 aaKnown RBP11.94□□□□□ -0.5
DDX41-212ENST00000511040 TBCCD1Q9NVR7 557 aa11.94□□□□□ -0.5
DDX41-212ENST00000511040 PTTG3PQ9NZH4 202 aa11.94□□□□□ -0.5
DDX41-212ENST00000511040 GPR160Q9UJ42 338 aa11.94□□□□□ -0.5
DDX41-212ENST00000511040 COMMD3-BMI1R4GMX3 469 aa11.94□□□□□ -0.5
DDX41-212ENST00000511040 CHD3Q12873 2000 aaKnown RBP11.94□□□□□ -0.5
DDX41-212ENST00000511040 LOC390937A0A1W2PQ73 354 aa11.93□□□□□ -0.5
DDX41-212ENST00000511040 C17orf100A8MU93 164 aa11.93□□□□□ -0.5
DDX41-212ENST00000511040 F5H5K5 113 aa11.93□□□□□ -0.5
DDX41-212ENST00000511040 ZNF593O00488 134 aaPredicted RBP11.93□□□□□ -0.5
DDX41-212ENST00000511040 SURF4O15260 269 aa11.93□□□□□ -0.5
DDX41-212ENST00000511040 SPRY3O43610 288 aa11.93□□□□□ -0.5
DDX41-212ENST00000511040 HMGN1P05114 100 aa11.93□□□□□ -0.5
DDX41-212ENST00000511040 HEXAP06865 529 aa11.93□□□□□ -0.5
DDX41-212ENST00000511040 FCGR1AP12314 374 aa11.93□□□□□ -0.5
DDX41-212ENST00000511040 SLC25A16P16260 332 aa11.93□□□□□ -0.5
DDX41-212ENST00000511040 COL8A2P25067 703 aa11.93□□□□□ -0.5
DDX41-212ENST00000511040 NR4A2P43354 598 aa11.93□□□□□ -0.5
DDX41-212ENST00000511040 ENTPD1P49961 510 aa11.93□□□□□ -0.5
DDX41-212ENST00000511040 CCL8P80075 99 aa11.93□□□□□ -0.5
DDX41-212ENST00000511040 KRTAP1-1Q07627 177 aa11.93□□□□□ -0.5
DDX41-212ENST00000511040 HLXQ14774 488 aaPredicted RBP11.93□□□□□ -0.5
DDX41-212ENST00000511040 RSPO1Q2MKA7 263 aaPredicted RBP11.93□□□□□ -0.5
DDX41-212ENST00000511040 LINC01590Q5TEZ4 76 aa11.93□□□□□ -0.5
DDX41-212ENST00000511040 SPATC1Q76KD6 591 aa11.93□□□□□ -0.5
DDX41-212ENST00000511040 NAA40Q86UY6 237 aa11.93□□□□□ -0.5
DDX41-212ENST00000511040 HIPK1Q86Z02 1210 aa11.93□□□□□ -0.5
DDX41-212ENST00000511040 OR10S1Q8NGN2 331 aa11.93□□□□□ -0.5
DDX41-212ENST00000511040 PTP4A1Q93096 173 aa11.93□□□□□ -0.5
DDX41-212ENST00000511040 CMBLQ96DG6 245 aa11.93□□□□□ -0.5
DDX41-212ENST00000511040 ATF6BQ99941 703 aa11.93□□□□□ -0.5
DDX41-212ENST00000511040 KCNG2Q9UJ96 466 aa11.93□□□□□ -0.5
DDX41-212ENST00000511040 MTORP42345 2549 aa11.92□□□□□ -0.5
DDX41-212ENST00000511040 ZSCAN5BA6NJL1 495 aa11.92□□□□□ -0.5
DDX41-212ENST00000511040 SAC3D1A6NKF1 404 aa11.92□□□□□ -0.5
DDX41-212ENST00000511040 VWC2LB2RUY7 222 aa11.92□□□□□ -0.5
DDX41-212ENST00000511040 PRR23D1E9PI22 279 aaPredicted RBP11.92□□□□□ -0.5
DDX41-212ENST00000511040 TPD52L2O43399 206 aaKnown RBP11.92□□□□□ -0.5
DDX41-212ENST00000511040 TIMM8AO60220 97 aaPredicted RBP11.92□□□□□ -0.5
DDX41-212ENST00000511040 CDC14BO60729 498 aa11.92□□□□□ -0.5
DDX41-212ENST00000511040 PRR23D2P0DMB1 279 aaPredicted RBP11.92□□□□□ -0.5
DDX41-212ENST00000511040 PAICSP22234 425 aaKnown RBP11.92□□□□□ -0.5
DDX41-212ENST00000511040 USF1P22415 310 aaPredicted RBP11.92□□□□□ -0.5
DDX41-212ENST00000511040 GSTT1P30711 240 aa11.92□□□□□ -0.5
DDX41-212ENST00000511040 ZNF81P51508 661 aa11.92□□□□□ -0.5
DDX41-212ENST00000511040 CRISP1P54107 249 aa11.92□□□□□ -0.5
DDX41-212ENST00000511040 ACTR3P61158 418 aa11.92□□□□□ -0.5
DDX41-212ENST00000511040 PSG7Q13046 419 aa11.92□□□□□ -0.5
DDX41-212ENST00000511040 MOGQ16653 247 aa11.92□□□□□ -0.5
DDX41-212ENST00000511040 KRTAP27-1Q3LI81 207 aa11.92□□□□□ -0.5
DDX41-212ENST00000511040 KLHL12Q53G59 568 aa11.92□□□□□ -0.5
DDX41-212ENST00000511040 DCXRQ7Z4W1 244 aa11.92□□□□□ -0.5
DDX41-212ENST00000511040 ZDHHC13Q8IUH4 622 aa11.92□□□□□ -0.5
DDX41-212ENST00000511040 ERI1Q8IV48 349 aaKnown RBP11.92□□□□□ -0.5
DDX41-212ENST00000511040 CPOQ8IVL8 374 aa11.92□□□□□ -0.5
DDX41-212ENST00000511040 ZNF786Q8N393 782 aa11.92□□□□□ -0.5
DDX41-212ENST00000511040 BBS1Q8NFJ9 593 aa11.92□□□□□ -0.5
DDX41-212ENST00000511040 YIPF5Q969M3 257 aa11.92□□□□□ -0.5
DDX41-212ENST00000511040 ZMYND19Q96E35 227 aaPredicted RBP11.92□□□□□ -0.5
DDX41-212ENST00000511040 PLEKHA8Q96JA3 519 aa11.92□□□□□ -0.5
DDX41-212ENST00000511040 BPESC1Q9GZL8 116 aa11.92□□□□□ -0.5
DDX41-212ENST00000511040 SLC25A19Q9HC21 320 aa11.92□□□□□ -0.5
DDX41-212ENST00000511040 MSL2Q9HCI7 577 aa11.92□□□□□ -0.5
DDX41-212ENST00000511040 MYOZ1Q9NP98 299 aaPredicted RBP11.92□□□□□ -0.5
DDX41-212ENST00000511040 KRT84Q9NSB2 600 aa11.92□□□□□ -0.5
DDX41-212ENST00000511040 CENPMQ9NSP4 180 aa11.92□□□□□ -0.5
DDX41-212ENST00000511040 TVP23BQ9NYZ1 205 aa11.92□□□□□ -0.5
DDX41-212ENST00000511040 ATPIF1Q9UII2 106 aa11.92□□□□□ -0.5
DDX41-212ENST00000511040 IGHV4-61A0A0C4DH41 118 aa11.91□□□□□ -0.5
DDX41-212ENST00000511040 PLSCR5A0PG75 271 aa11.91□□□□□ -0.5
DDX41-212ENST00000511040 M0R129 80 aa11.91□□□□□ -0.5
DDX41-212ENST00000511040 NDUFS8O00217 210 aa11.91□□□□□ -0.5
DDX41-212ENST00000511040 IGHV1-46P01743 117 aa11.91□□□□□ -0.5
DDX41-212ENST00000511040 MT-ND5P03915 603 aa11.91□□□□□ -0.5
DDX41-212ENST00000511040 ACSM4P0C7M7 580 aa11.91□□□□□ -0.5
DDX41-212ENST00000511040 EPHA2P29317 976 aa11.91□□□□□ -0.5
DDX41-212ENST00000511040 MMP15P51511 669 aa11.91□□□□□ -0.5
DDX41-212ENST00000511040 PRSS12P56730 875 aa11.91□□□□□ -0.5
DDX41-212ENST00000511040 ECH1Q13011 328 aa11.91□□□□□ -0.5
DDX41-212ENST00000511040 SNAPC1Q16533 368 aa11.91□□□□□ -0.5
DDX41-212ENST00000511040 C1orf174Q8IYL3 243 aa11.91□□□□□ -0.5
DDX41-212ENST00000511040 OR5AS1Q8N127 324 aa11.91□□□□□ -0.5
DDX41-212ENST00000511040 PARP8Q8N3A8 854 aa11.91□□□□□ -0.5
DDX41-212ENST00000511040 OR6N2Q8NGY6 317 aa11.91□□□□□ -0.5
DDX41-212ENST00000511040 DNAJC9Q8WXX5 260 aa11.91□□□□□ -0.5
DDX41-212ENST00000511040 APOBEC3DQ96AK3 386 aaPredicted RBP11.91□□□□□ -0.5
DDX41-212ENST00000511040 CENPNQ96H22 339 aaPredicted RBP11.91□□□□□ -0.5
DDX41-212ENST00000511040 DCLRE1CQ96SD1 692 aaKnown RBP11.91□□□□□ -0.5
DDX41-212ENST00000511040 INTS14Q96SY0 518 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms