RNA–Protein interactions for RNA: ENST00000508624.5

APC-208, Transcript of APC, WNT signaling pathway regulator, humanhuman

TSL 1 (best)

Gene APC, Length 7,406 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APC-208ENST00000508624 ADGRL4Q9HBW9 690 aa4.78□□□□□ -1.64
APC-208ENST00000508624 GAR1Q9NY12 217 aaKnown RBP4.78□□□□□ -1.64
APC-208ENST00000508624 DNMT3BQ9UBC3 853 aaKnown RBP4.78□□□□□ -1.64
APC-208ENST00000508624 ZMAT5Q9UDW3 170 aaKnown RBP4.78□□□□□ -1.64
APC-208ENST00000508624 PCDHGA5Q9Y5G8 931 aa4.78□□□□□ -1.64
APC-208ENST00000508624 FLVCR1Q9Y5Y0 555 aa4.78□□□□□ -1.64
APC-208ENST00000508624 OTOFQ9HC10 1997 aa4.78□□□□□ -1.64
APC-208ENST00000508624 A0A1B0GTQ1 180 aa4.78□□□□□ -1.64
APC-208ENST00000508624 RAB27BO00194 218 aa4.78□□□□□ -1.64
APC-208ENST00000508624 PLA2G10O15496 165 aa4.78□□□□□ -1.64
APC-208ENST00000508624 PMP2P02689 132 aa4.78□□□□□ -1.64
APC-208ENST00000508624 CD3DP04234 171 aa4.78□□□□□ -1.64
APC-208ENST00000508624 LIPCP11150 499 aa4.78□□□□□ -1.64
APC-208ENST00000508624 SLC25A4P12235 298 aa4.78□□□□□ -1.64
APC-208ENST00000508624 FCGR2AP12318 317 aa4.78□□□□□ -1.64
APC-208ENST00000508624 GJA4P35212 333 aa4.78□□□□□ -1.64
APC-208ENST00000508624 ZNF79Q15937 498 aa4.78□□□□□ -1.64
APC-208ENST00000508624 SLC25A35Q3KQZ1 300 aa4.78□□□□□ -1.64
APC-208ENST00000508624 Q6ZRG5 221 aa4.78□□□□□ -1.64
APC-208ENST00000508624 DCXRQ7Z4W1 244 aa4.78□□□□□ -1.64
APC-208ENST00000508624 NAA40Q86UY6 237 aa4.78□□□□□ -1.64
APC-208ENST00000508624 METTL27Q8N6F8 245 aaPredicted RBP4.78□□□□□ -1.64
APC-208ENST00000508624 BBS1Q8NFJ9 593 aa4.78□□□□□ -1.64
APC-208ENST00000508624 OR2G3Q8NGZ4 309 aa4.78□□□□□ -1.64
APC-208ENST00000508624 OTOSQ8NHW6 89 aa4.78□□□□□ -1.64
APC-208ENST00000508624 FRZBQ92765 325 aa4.78□□□□□ -1.64
APC-208ENST00000508624 PLA2G12AQ9BZM1 189 aa4.78□□□□□ -1.64
APC-208ENST00000508624 RHOFQ9HBH0 211 aa4.78□□□□□ -1.64
APC-208ENST00000508624 CDH20Q9HBT6 801 aa4.78□□□□□ -1.64
APC-208ENST00000508624 CREBZFQ9NS37 354 aa4.78□□□□□ -1.64
APC-208ENST00000508624 LHX6Q9UPM6 363 aa4.78□□□□□ -1.64
APC-208ENST00000508624 COL11A2P13942 1736 aaPredicted RBP4.78□□□□□ -1.64
APC-208ENST00000508624 XIRP1Q702N8 1843 aaKnown RBP4.78□□□□□ -1.64
APC-208ENST00000508624 FRG2CA6NGY1 282 aa4.78□□□□□ -1.64
APC-208ENST00000508624 RNASEK-C17orf49H0YIS7 233 aa4.78□□□□□ -1.64
APC-208ENST00000508624 P2RY10O00398 339 aa4.78□□□□□ -1.64
APC-208ENST00000508624 CXCL10P02778 98 aa4.78□□□□□ -1.64
APC-208ENST00000508624 IGFBP4P22692 258 aa4.78□□□□□ -1.64
APC-208ENST00000508624 CD80P33681 288 aa4.78□□□□□ -1.64
APC-208ENST00000508624 UBE2NP61088 152 aaKnown RBP4.78□□□□□ -1.64
APC-208ENST00000508624 RAB11AP62491 216 aa4.78□□□□□ -1.64
APC-208ENST00000508624 NTHL1P78549 312 aa4.78□□□□□ -1.64
APC-208ENST00000508624 PDLIM3Q53GG5 364 aaPredicted RBP4.78□□□□□ -1.64
APC-208ENST00000508624 CD200R1LQ6Q8B3 271 aa4.78□□□□□ -1.64
APC-208ENST00000508624 ESPNLQ6ZVH7 1005 aa4.78□□□□□ -1.64
APC-208ENST00000508624 Q7L0L9 218 aa4.78□□□□□ -1.64
APC-208ENST00000508624 ZFP82Q8N141 532 aa4.78□□□□□ -1.64
APC-208ENST00000508624 TMED6Q8WW62 240 aa4.78□□□□□ -1.64
APC-208ENST00000508624 CCDC74AQ96AQ1 378 aa4.78□□□□□ -1.64
APC-208ENST00000508624 TMEM18Q96B42 140 aa4.78□□□□□ -1.64
APC-208ENST00000508624 CNRIP1Q96F85 164 aaPredicted RBP4.78□□□□□ -1.64
APC-208ENST00000508624 LIN37Q96GY3 246 aaPredicted RBP4.78□□□□□ -1.64
APC-208ENST00000508624 PLK3Q9H4B4 646 aa4.78□□□□□ -1.64
APC-208ENST00000508624 KCMF1Q9P0J7 381 aa4.78□□□□□ -1.64
APC-208ENST00000508624 VDAC3Q9Y277 283 aa4.78□□□□□ -1.64
APC-208ENST00000508624 CBY1Q9Y3M2 126 aa4.78□□□□□ -1.64
APC-208ENST00000508624 SLC2A10O95528 541 aa4.77□□□□□ -1.65
APC-208ENST00000508624 METTL15P1P0C7V9 234 aa4.77□□□□□ -1.65
APC-208ENST00000508624 ITGB8P26012 769 aa4.77□□□□□ -1.65
APC-208ENST00000508624 THBS4P35443 961 aa4.77□□□□□ -1.65
APC-208ENST00000508624 SSTP61278 116 aa4.77□□□□□ -1.65
APC-208ENST00000508624 ENDOGQ14249 297 aaKnown RBP4.77□□□□□ -1.65
APC-208ENST00000508624 SLC36A2Q495M3 483 aa4.77□□□□□ -1.65
APC-208ENST00000508624 CARFQ8N187 725 aa4.77□□□□□ -1.65
APC-208ENST00000508624 TP53I13Q8NBR0 393 aaPredicted RBP4.77□□□□□ -1.65
APC-208ENST00000508624 CORO2AQ92828 525 aa4.77□□□□□ -1.65
APC-208ENST00000508624 FGF14Q92915 247 aa4.77□□□□□ -1.65
APC-208ENST00000508624 PINX1Q96BK5 328 aaKnown RBP4.77□□□□□ -1.65
APC-208ENST00000508624 TVP23CQ96ET8 276 aa4.77□□□□□ -1.65
APC-208ENST00000508624 TOLLIPQ9H0E2 274 aa4.77□□□□□ -1.65
APC-208ENST00000508624 SLC17A4Q9Y2C5 497 aa4.77□□□□□ -1.65
APC-208ENST00000508624 LSM2Q9Y333 95 aaKnown RBP4.77□□□□□ -1.65
APC-208ENST00000508624 CKAP5Q14008 2032 aa4.77□□□□□ -1.65
APC-208ENST00000508624 PSME4Q14997 1843 aa4.77□□□□□ -1.65
APC-208ENST00000508624 ELOA3CA0A087WX78 387 aaPredicted RBP4.77□□□□□ -1.65
APC-208ENST00000508624 ZNF705GA8MUZ8 300 aaPredicted RBP4.77□□□□□ -1.65
APC-208ENST00000508624 F6UZH7 168 aa4.77□□□□□ -1.65
APC-208ENST00000508624 LILRB5O75023 590 aa4.77□□□□□ -1.65
APC-208ENST00000508624 PGA3P0DJD8 388 aa4.77□□□□□ -1.65
APC-208ENST00000508624 MEOX2P50222 304 aa4.77□□□□□ -1.65
APC-208ENST00000508624 SNU13P55769 128 aaKnown RBP4.77□□□□□ -1.65
APC-208ENST00000508624 RPL18Q07020 188 aaKnown RBP4.77□□□□□ -1.65
APC-208ENST00000508624 PNRC1Q12796 327 aaPredicted RBP4.77□□□□□ -1.65
APC-208ENST00000508624 PRSS54Q6PEW0 395 aa4.77□□□□□ -1.65
APC-208ENST00000508624 OR2A1Q8NGT9 310 aa4.77□□□□□ -1.65
APC-208ENST00000508624 NUDT8Q8WV74 236 aa4.77□□□□□ -1.65
APC-208ENST00000508624 FGF13Q92913 245 aa4.77□□□□□ -1.65
APC-208ENST00000508624 DVL3Q92997 716 aaPredicted RBP4.77□□□□□ -1.65
APC-208ENST00000508624 HIPK2Q9H2X6 1198 aa4.77□□□□□ -1.65
APC-208ENST00000508624 HCFC1R1Q9NWW0 138 aa4.77□□□□□ -1.65
APC-208ENST00000508624 B3GAT1Q9P2W7 334 aa4.77□□□□□ -1.65
APC-208ENST00000508624 DSPPQ9NZW4 1301 aa4.77□□□□□ -1.65
APC-208ENST00000508624 CYB5BO43169 146 aa4.77□□□□□ -1.65
APC-208ENST00000508624 RAB4AP20338 218 aa4.77□□□□□ -1.65
APC-208ENST00000508624 CCNOP22674 350 aa4.77□□□□□ -1.65
APC-208ENST00000508624 BIDP55957 195 aa4.77□□□□□ -1.65
APC-208ENST00000508624 NDUFA6P56556 154 aa4.77□□□□□ -1.65
APC-208ENST00000508624 HSF1Q00613 529 aa4.77□□□□□ -1.65
APC-208ENST00000508624 KLF9Q13886 244 aaPredicted RBP4.77□□□□□ -1.65
APC-208ENST00000508624 ZNF239Q16600 458 aaKnown RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms