RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 TVP23AA6NH52 213 aa7.88□□□□□ -1.15
NUP54-207ENST00000508583 ANKRD65E5RJM6 399 aa7.88□□□□□ -1.15
NUP54-207ENST00000508583 H7C417 338 aa7.88□□□□□ -1.15
NUP54-207ENST00000508583 M0R233 179 aa7.88□□□□□ -1.15
NUP54-207ENST00000508583 OVOL3O00110 214 aa7.88□□□□□ -1.15
NUP54-207ENST00000508583 PHYHO14832 338 aa7.88□□□□□ -1.15
NUP54-207ENST00000508583 GPANK1O95872 356 aa7.88□□□□□ -1.15
NUP54-207ENST00000508583 SCG5P05408 212 aa7.88□□□□□ -1.15
NUP54-207ENST00000508583 FAM157BP0CG42 384 aa7.88□□□□□ -1.15
NUP54-207ENST00000508583 CLUP10909 449 aa7.88□□□□□ -1.15
NUP54-207ENST00000508583 CCL2P13500 99 aa7.88□□□□□ -1.15
NUP54-207ENST00000508583 HSD11B1P28845 292 aa7.88□□□□□ -1.15
NUP54-207ENST00000508583 THBS4P35443 961 aa7.88□□□□□ -1.15
NUP54-207ENST00000508583 PPOXP50336 477 aa7.88□□□□□ -1.15
NUP54-207ENST00000508583 ATP5J2P56134 94 aa7.88□□□□□ -1.15
NUP54-207ENST00000508583 PPP1CBP62140 327 aa7.88□□□□□ -1.15
NUP54-207ENST00000508583 ELF3P78545 371 aaPredicted RBP7.88□□□□□ -1.15
NUP54-207ENST00000508583 APOFQ13790 326 aa7.88□□□□□ -1.15
NUP54-207ENST00000508583 GGTLC2Q14390 218 aa7.88□□□□□ -1.15
NUP54-207ENST00000508583 CCDC92Q53HC0 331 aaPredicted RBP7.88□□□□□ -1.15
NUP54-207ENST00000508583 LINC01590Q5TEZ4 76 aa7.88□□□□□ -1.15
NUP54-207ENST00000508583 KCTD18Q6PI47 426 aaPredicted RBP7.88□□□□□ -1.15
NUP54-207ENST00000508583 CORO6Q6QEF8 472 aa7.88□□□□□ -1.15
NUP54-207ENST00000508583 PRSS57Q6UWY2 283 aa7.88□□□□□ -1.15
NUP54-207ENST00000508583 MEPCEQ7L2J0 689 aaKnown RBP7.88□□□□□ -1.15
NUP54-207ENST00000508583 ZNF771Q7L3S4 317 aaPredicted RBP7.88□□□□□ -1.15
NUP54-207ENST00000508583 SLC16A9Q7RTY1 509 aa7.88□□□□□ -1.15
NUP54-207ENST00000508583 DCXRQ7Z4W1 244 aa7.88□□□□□ -1.15
NUP54-207ENST00000508583 LINC00346Q8IVM7 164 aa7.88□□□□□ -1.15
NUP54-207ENST00000508583 TCEANCQ8N8B7 351 aa7.88□□□□□ -1.15
NUP54-207ENST00000508583 ZNF511Q8NB15 262 aa7.88□□□□□ -1.15
NUP54-207ENST00000508583 OR1J1Q8NGS3 322 aa7.88□□□□□ -1.15
NUP54-207ENST00000508583 SYNPRQ8TBG9 265 aa7.88□□□□□ -1.15
NUP54-207ENST00000508583 ASB17Q8WXJ9 295 aa7.88□□□□□ -1.15
NUP54-207ENST00000508583 ZMYND19Q96E35 227 aaPredicted RBP7.88□□□□□ -1.15
NUP54-207ENST00000508583 Q96MT0 163 aa7.88□□□□□ -1.15
NUP54-207ENST00000508583 IL4I1Q96RQ9 567 aa7.88□□□□□ -1.15
NUP54-207ENST00000508583 CNN2Q99439 309 aaKnown RBP7.88□□□□□ -1.15
NUP54-207ENST00000508583 CACNG6Q9BXT2 260 aa7.88□□□□□ -1.15
NUP54-207ENST00000508583 YIPF3Q9GZM5 350 aa7.88□□□□□ -1.15
NUP54-207ENST00000508583 RAB1BQ9H0U4 201 aa7.88□□□□□ -1.15
NUP54-207ENST00000508583 MS4A5Q9H3V2 200 aa7.88□□□□□ -1.15
NUP54-207ENST00000508583 NIPAL2Q9H841 368 aa7.88□□□□□ -1.15
NUP54-207ENST00000508583 MED20Q9H944 212 aa7.88□□□□□ -1.15
NUP54-207ENST00000508583 WDR76Q9H967 626 aa7.88□□□□□ -1.15
NUP54-207ENST00000508583 MYOZ1Q9NP98 299 aaPredicted RBP7.88□□□□□ -1.15
NUP54-207ENST00000508583 CYSLTR2Q9NS75 346 aa7.88□□□□□ -1.15
NUP54-207ENST00000508583 HAO2Q9NYQ3 351 aa7.88□□□□□ -1.15
NUP54-207ENST00000508583 WARS2Q9UGM6 360 aaKnown RBP7.88□□□□□ -1.15
NUP54-207ENST00000508583 LAMP5Q9UJQ1 280 aa7.88□□□□□ -1.15
NUP54-207ENST00000508583 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.88□□□□□ -1.15
NUP54-207ENST00000508583 GRIP1Q9Y3R0 1128 aa7.88□□□□□ -1.15
NUP54-207ENST00000508583 GMPPBQ9Y5P6 360 aa7.88□□□□□ -1.15
NUP54-207ENST00000508583 OTOGQ6ZRI0 2925 aa7.87□□□□□ -1.15
NUP54-207ENST00000508583 LOC100130705A0A1B0GUX0 176 aa7.87□□□□□ -1.15
NUP54-207ENST00000508583 PLSCR5A0PG75 271 aa7.87□□□□□ -1.15
NUP54-207ENST00000508583 F5H5K5 113 aa7.87□□□□□ -1.15
NUP54-207ENST00000508583 M0R135 149 aa7.87□□□□□ -1.15
NUP54-207ENST00000508583 LCE2BO14633 110 aa7.87□□□□□ -1.15
NUP54-207ENST00000508583 GPRIN2O60269 458 aa7.87□□□□□ -1.15
NUP54-207ENST00000508583 LYNP07948 512 aa7.87□□□□□ -1.15
NUP54-207ENST00000508583 CSF3P09919 207 aa7.87□□□□□ -1.15
NUP54-207ENST00000508583 ZNF250P15622 560 aa7.87□□□□□ -1.15
NUP54-207ENST00000508583 SLC2A5P22732 501 aa7.87□□□□□ -1.15
NUP54-207ENST00000508583 EPHA2P29317 976 aa7.87□□□□□ -1.15
NUP54-207ENST00000508583 HTR1FP30939 366 aa7.87□□□□□ -1.15
NUP54-207ENST00000508583 ATP6V1E1P36543 226 aa7.87□□□□□ -1.15
NUP54-207ENST00000508583 SLC6A9P48067 706 aa7.87□□□□□ -1.15
NUP54-207ENST00000508583 PTH2RP49190 550 aa7.87□□□□□ -1.15
NUP54-207ENST00000508583 SNRPGP62308 76 aaKnown RBP7.87□□□□□ -1.15
NUP54-207ENST00000508583 SLC34A1Q06495 639 aa7.87□□□□□ -1.15
NUP54-207ENST00000508583 MALLQ13021 153 aa7.87□□□□□ -1.15
NUP54-207ENST00000508583 EIF2B1Q14232 305 aaKnown RBP7.87□□□□□ -1.15
NUP54-207ENST00000508583 NKPD1Q17RQ9 610 aa7.87□□□□□ -1.15
NUP54-207ENST00000508583 SWI5Q1ZZU3 235 aa7.87□□□□□ -1.15
NUP54-207ENST00000508583 ZIK1Q3SY52 487 aaPredicted RBP7.87□□□□□ -1.15
NUP54-207ENST00000508583 FAM209AQ5JX71 171 aa7.87□□□□□ -1.15
NUP54-207ENST00000508583 SLC25A30Q5SVS4 291 aa7.87□□□□□ -1.15
NUP54-207ENST00000508583 MBNL2Q5VZF2 373 aaKnown RBP7.87□□□□□ -1.15
NUP54-207ENST00000508583 TTC23Q5W5X9 447 aa7.87□□□□□ -1.15
NUP54-207ENST00000508583 C11orf71Q6IPW1 123 aa7.87□□□□□ -1.15
NUP54-207ENST00000508583 TMEM154Q6P9G4 183 aa7.87□□□□□ -1.15
NUP54-207ENST00000508583 DRAM2Q6UX65 266 aa7.87□□□□□ -1.15
NUP54-207ENST00000508583 CFAP77Q6ZQR2 320 aa7.87□□□□□ -1.15
NUP54-207ENST00000508583 DPY19L4Q7Z388 723 aa7.87□□□□□ -1.15
NUP54-207ENST00000508583 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.87□□□□□ -1.15
NUP54-207ENST00000508583 TIGD4Q8IY51 512 aa7.87□□□□□ -1.15
NUP54-207ENST00000508583 PAQR4Q8N4S7 273 aaPredicted RBP7.87□□□□□ -1.15
NUP54-207ENST00000508583 SETD9Q8NE22 299 aa7.87□□□□□ -1.15
NUP54-207ENST00000508583 OTOSQ8NHW6 89 aa7.87□□□□□ -1.15
NUP54-207ENST00000508583 IGFBPL1Q8WX77 278 aa7.87□□□□□ -1.15
NUP54-207ENST00000508583 SLAMF6Q96DU3 332 aa7.87□□□□□ -1.15
NUP54-207ENST00000508583 MRPL48Q96GC5 212 aaKnown RBP7.87□□□□□ -1.15
NUP54-207ENST00000508583 ZNF799Q96GE5 643 aa7.87□□□□□ -1.15
NUP54-207ENST00000508583 TEAD3Q99594 435 aa7.87□□□□□ -1.15
NUP54-207ENST00000508583 HCAR1Q9BXC0 346 aa7.87□□□□□ -1.15
NUP54-207ENST00000508583 CXXC4Q9H2H0 198 aa7.87□□□□□ -1.15
NUP54-207ENST00000508583 OPA3Q9H6K4 179 aa7.87□□□□□ -1.15
NUP54-207ENST00000508583 RNPEPL1Q9HAU8 725 aa7.87□□□□□ -1.15
NUP54-207ENST00000508583 CENPMQ9NSP4 180 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms