RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 POLR1DQ9Y2S0 133 aa10.96□□□□□ -0.65
HMGCS1-205ENST00000508319 LHFPL6Q9Y693 200 aa10.96□□□□□ -0.65
HMGCS1-205ENST00000508319 V9GYQ6 96 aa10.96□□□□□ -0.65
HMGCS1-205ENST00000508319 MGAM2Q2M2H8 2515 aa10.96□□□□□ -0.66
HMGCS1-205ENST00000508319 FOXH1O75593 365 aa10.95□□□□□ -0.66
HMGCS1-205ENST00000508319 PPP1R3DO95685 299 aa10.95□□□□□ -0.66
HMGCS1-205ENST00000508319 RAC2P15153 192 aa10.95□□□□□ -0.66
HMGCS1-205ENST00000508319 CFPP27918 469 aa10.95□□□□□ -0.66
HMGCS1-205ENST00000508319 COMPP49747 757 aaPredicted RBP10.95□□□□□ -0.66
HMGCS1-205ENST00000508319 RGS6P49758 472 aa10.95□□□□□ -0.66
HMGCS1-205ENST00000508319 MMP16P51512 607 aa10.95□□□□□ -0.66
HMGCS1-205ENST00000508319 SEC61A1P61619 476 aaKnown RBP10.95□□□□□ -0.66
HMGCS1-205ENST00000508319 BTG1P62324 171 aa10.95□□□□□ -0.66
HMGCS1-205ENST00000508319 ACTG1P63261 375 aa10.95□□□□□ -0.66
HMGCS1-205ENST00000508319 HIST1H3AP68431 136 aa10.95□□□□□ -0.66
HMGCS1-205ENST00000508319 COX10Q12887 443 aa10.95□□□□□ -0.66
HMGCS1-205ENST00000508319 ZMYND11Q15326 602 aa10.95□□□□□ -0.66
HMGCS1-205ENST00000508319 TMEM155Q4W5P6 130 aa10.95□□□□□ -0.66
HMGCS1-205ENST00000508319 HIST2H3PS2Q5TEC6 136 aa10.95□□□□□ -0.66
HMGCS1-205ENST00000508319 HIST2H3AQ71DI3 136 aa10.95□□□□□ -0.66
HMGCS1-205ENST00000508319 OR5AS1Q8N127 324 aa10.95□□□□□ -0.66
HMGCS1-205ENST00000508319 SPICQ8N5J4 248 aa10.95□□□□□ -0.66
HMGCS1-205ENST00000508319 DEFB108BQ8NET1 73 aa10.95□□□□□ -0.66
HMGCS1-205ENST00000508319 OR10AD1Q8NGE0 317 aa10.95□□□□□ -0.66
HMGCS1-205ENST00000508319 FAM216AQ8WUB2 273 aa10.95□□□□□ -0.66
HMGCS1-205ENST00000508319 PTP4A1Q93096 173 aa10.95□□□□□ -0.66
HMGCS1-205ENST00000508319 COQ7Q99807 217 aa10.95□□□□□ -0.66
HMGCS1-205ENST00000508319 SUCNR1Q9BXA5 334 aa10.95□□□□□ -0.66
HMGCS1-205ENST00000508319 HDHD2Q9H0R4 259 aa10.95□□□□□ -0.66
HMGCS1-205ENST00000508319 GORASP2Q9H8Y8 452 aa10.95□□□□□ -0.66
HMGCS1-205ENST00000508319 PATZ1Q9HBE1 687 aaKnown RBP10.95□□□□□ -0.66
HMGCS1-205ENST00000508319 ESM1Q9NQ30 184 aa10.95□□□□□ -0.66
HMGCS1-205ENST00000508319 MMP26Q9NRE1 261 aa10.95□□□□□ -0.66
HMGCS1-205ENST00000508319 ADA2Q9NZK5 511 aa10.95□□□□□ -0.66
HMGCS1-205ENST00000508319 PPP1R3CQ9UQK1 317 aa10.95□□□□□ -0.66
HMGCS1-205ENST00000508319 POLR3KQ9Y2Y1 108 aaPredicted RBP10.95□□□□□ -0.66
HMGCS1-205ENST00000508319 A8MXK9 166 aa10.94□□□□□ -0.66
HMGCS1-205ENST00000508319 F5H0A9 414 aaPredicted RBP10.94□□□□□ -0.66
HMGCS1-205ENST00000508319 ARPC3O15145 178 aa10.94□□□□□ -0.66
HMGCS1-205ENST00000508319 SURF4O15260 269 aa10.94□□□□□ -0.66
HMGCS1-205ENST00000508319 SBK2P0C263 348 aa10.94□□□□□ -0.66
HMGCS1-205ENST00000508319 FPR3P25089 353 aa10.94□□□□□ -0.66
HMGCS1-205ENST00000508319 CRABP1P29762 137 aa10.94□□□□□ -0.66
HMGCS1-205ENST00000508319 SPIBQ01892 262 aa10.94□□□□□ -0.66
HMGCS1-205ENST00000508319 KRT72Q14CN4 511 aa10.94□□□□□ -0.66
HMGCS1-205ENST00000508319 TUSC1Q2TAM9 212 aa10.94□□□□□ -0.66
HMGCS1-205ENST00000508319 KRTAP27-1Q3LI81 207 aa10.94□□□□□ -0.66
HMGCS1-205ENST00000508319 LEG1Q6P5S2 330 aa10.94□□□□□ -0.66
HMGCS1-205ENST00000508319 PGM2L1Q6PCE3 622 aa10.94□□□□□ -0.66
HMGCS1-205ENST00000508319 DNM1P34Q6PK57 102 aa10.94□□□□□ -0.66
HMGCS1-205ENST00000508319 CORO6Q6QEF8 472 aa10.94□□□□□ -0.66
HMGCS1-205ENST00000508319 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.94□□□□□ -0.66
HMGCS1-205ENST00000508319 LRRC28Q86X40 367 aaPredicted RBP10.94□□□□□ -0.66
HMGCS1-205ENST00000508319 OR6V1Q8N148 313 aa10.94□□□□□ -0.66
HMGCS1-205ENST00000508319 KLHL36Q8N4N3 616 aa10.94□□□□□ -0.66
HMGCS1-205ENST00000508319 GJC3Q8NFK1 279 aa10.94□□□□□ -0.66
HMGCS1-205ENST00000508319 SLC26A10Q8NG04 563 aa10.94□□□□□ -0.66
HMGCS1-205ENST00000508319 DVL3Q92997 716 aaPredicted RBP10.94□□□□□ -0.66
HMGCS1-205ENST00000508319 APOBEC3DQ96AK3 386 aaPredicted RBP10.94□□□□□ -0.66
HMGCS1-205ENST00000508319 ERMAPQ96PL5 475 aaPredicted RBP10.94□□□□□ -0.66
HMGCS1-205ENST00000508319 JMJD8Q96S16 334 aa10.94□□□□□ -0.66
HMGCS1-205ENST00000508319 NMNAT3Q96T66 252 aa10.94□□□□□ -0.66
HMGCS1-205ENST00000508319 RBM4Q9BWF3 364 aaKnown RBP10.94□□□□□ -0.66
HMGCS1-205ENST00000508319 FAM107BQ9H098 131 aa10.94□□□□□ -0.66
HMGCS1-205ENST00000508319 OR52D1Q9H346 318 aa10.94□□□□□ -0.66
HMGCS1-205ENST00000508319 GCM1Q9NP62 436 aa10.94□□□□□ -0.66
HMGCS1-205ENST00000508319 PTTG3PQ9NZH4 202 aa10.94□□□□□ -0.66
HMGCS1-205ENST00000508319 MAGEL2Q9UJ55 1249 aa10.94□□□□□ -0.66
HMGCS1-205ENST00000508319 B9D1Q9UPM9 204 aa10.94□□□□□ -0.66
HMGCS1-205ENST00000508319 TMEM89A2RUT3 159 aa10.93□□□□□ -0.66
HMGCS1-205ENST00000508319 TMEM178BH3BS89 294 aa10.93□□□□□ -0.66
HMGCS1-205ENST00000508319 TRIM77I1YAP6 450 aa10.93□□□□□ -0.66
HMGCS1-205ENST00000508319 ARPC2O15144 300 aa10.93□□□□□ -0.66
HMGCS1-205ENST00000508319 MLNRO43193 412 aa10.93□□□□□ -0.66
HMGCS1-205ENST00000508319 SNX3O60493 162 aa10.93□□□□□ -0.66
HMGCS1-205ENST00000508319 GMNNO75496 209 aa10.93□□□□□ -0.66
HMGCS1-205ENST00000508319 GADD45GO95257 159 aa10.93□□□□□ -0.66
HMGCS1-205ENST00000508319 HSD17B1P14061 328 aa10.93□□□□□ -0.66
HMGCS1-205ENST00000508319 HIST1H1CP16403 213 aaKnown RBP10.93□□□□□ -0.66
HMGCS1-205ENST00000508319 SLC6A6P31641 620 aa10.93□□□□□ -0.66
HMGCS1-205ENST00000508319 MDH2P40926 338 aaKnown RBP10.93□□□□□ -0.66
HMGCS1-205ENST00000508319 SLC6A9P48067 706 aa10.93□□□□□ -0.66
HMGCS1-205ENST00000508319 RSPO1Q2MKA7 263 aaPredicted RBP10.93□□□□□ -0.66
HMGCS1-205ENST00000508319 RFX4Q33E94 735 aa10.93□□□□□ -0.66
HMGCS1-205ENST00000508319 OR2T2Q6IF00 324 aa10.93□□□□□ -0.66
HMGCS1-205ENST00000508319 SLC18B1Q6NT16 456 aa10.93□□□□□ -0.66
HMGCS1-205ENST00000508319 CFAP77Q6ZQR2 320 aa10.93□□□□□ -0.66
HMGCS1-205ENST00000508319 COLCA1Q6ZS62 124 aa10.93□□□□□ -0.66
HMGCS1-205ENST00000508319 JAZF1Q86VZ6 243 aa10.93□□□□□ -0.66
HMGCS1-205ENST00000508319 BPIFB2Q8N4F0 458 aa10.93□□□□□ -0.66
HMGCS1-205ENST00000508319 ZDHHC22Q8N966 263 aa10.93□□□□□ -0.66
HMGCS1-205ENST00000508319 OR8G5Q8NG78 346 aa10.93□□□□□ -0.66
HMGCS1-205ENST00000508319 OR5L1Q8NGL2 311 aa10.93□□□□□ -0.66
HMGCS1-205ENST00000508319 C22orf15Q8WYQ4 148 aa10.93□□□□□ -0.66
HMGCS1-205ENST00000508319 PYURFQ96I23 114 aa10.93□□□□□ -0.66
HMGCS1-205ENST00000508319 MEGF10Q96KG7 1140 aa10.93□□□□□ -0.66
HMGCS1-205ENST00000508319 DOCK11Q5JSL3 2073 aa10.93□□□□□ -0.66
HMGCS1-205ENST00000508319 A0A1B0GWJ7 208 aa10.92□□□□□ -0.66
HMGCS1-205ENST00000508319 CEACAM18A8MTB9 384 aa10.92□□□□□ -0.66
HMGCS1-205ENST00000508319 IQCF6A8MYZ5 107 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms