RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 F3P13726 295 aa9.75□□□□□ -0.85
PDLIM5-210ENST00000508216 LMO1P25800 156 aa9.75□□□□□ -0.85
PDLIM5-210ENST00000508216 P2RY2P41231 377 aa9.75□□□□□ -0.85
PDLIM5-210ENST00000508216 SNAI3Q3KNW1 292 aa9.75□□□□□ -0.85
PDLIM5-210ENST00000508216 SMARCD3Q6STE5 483 aa9.75□□□□□ -0.85
PDLIM5-210ENST00000508216 PAQR6Q6TCH4 344 aa9.75□□□□□ -0.85
PDLIM5-210ENST00000508216 GKN2Q86XP6 184 aa9.75□□□□□ -0.85
PDLIM5-210ENST00000508216 C17orf78Q8N4C9 275 aa9.75□□□□□ -0.85
PDLIM5-210ENST00000508216 FAM71E2Q8N5Q1 922 aa9.75□□□□□ -0.85
PDLIM5-210ENST00000508216 FRMD1Q8N878 549 aa9.75□□□□□ -0.85
PDLIM5-210ENST00000508216 DCAF4Q8WV16 495 aa9.75□□□□□ -0.85
PDLIM5-210ENST00000508216 PIGBQ92521 554 aa9.75□□□□□ -0.85
PDLIM5-210ENST00000508216 ZNF775Q96BV0 537 aaPredicted RBP9.75□□□□□ -0.85
PDLIM5-210ENST00000508216 RASD2Q96D21 266 aa9.75□□□□□ -0.85
PDLIM5-210ENST00000508216 EAF1Q96JC9 268 aaPredicted RBP9.75□□□□□ -0.85
PDLIM5-210ENST00000508216 INSM2Q96T92 566 aaPredicted RBP9.75□□□□□ -0.85
PDLIM5-210ENST00000508216 RNF208Q9H0X6 261 aa9.75□□□□□ -0.85
PDLIM5-210ENST00000508216 MEGF9Q9H1U4 602 aa9.75□□□□□ -0.85
PDLIM5-210ENST00000508216 SEMA4BQ9NPR2 832 aaPredicted RBP9.75□□□□□ -0.85
PDLIM5-210ENST00000508216 LANCL2Q9NS86 450 aa9.75□□□□□ -0.85
PDLIM5-210ENST00000508216 SHPKQ9UHJ6 478 aa9.75□□□□□ -0.85
PDLIM5-210ENST00000508216 SRPK3Q9UPE1 567 aa9.75□□□□□ -0.85
PDLIM5-210ENST00000508216 NTNG1Q9Y2I2 539 aa9.75□□□□□ -0.85
PDLIM5-210ENST00000508216 ANKUB1A6NFN9 424 aa9.74□□□□□ -0.85
PDLIM5-210ENST00000508216 J3QR06 171 aa9.74□□□□□ -0.85
PDLIM5-210ENST00000508216 TAAR5O14804 337 aa9.74□□□□□ -0.85
PDLIM5-210ENST00000508216 LILRA1O75019 489 aa9.74□□□□□ -0.85
PDLIM5-210ENST00000508216 GBAP04062 536 aa9.74□□□□□ -0.85
PDLIM5-210ENST00000508216 DCNP07585 359 aaKnown RBP9.74□□□□□ -0.85
PDLIM5-210ENST00000508216 CT45A8P0DMV1 189 aa9.74□□□□□ -0.85
PDLIM5-210ENST00000508216 CT45A9P0DMV2 189 aa9.74□□□□□ -0.85
PDLIM5-210ENST00000508216 OSMP13725 252 aa9.74□□□□□ -0.85
PDLIM5-210ENST00000508216 IL2RBP14784 551 aa9.74□□□□□ -0.85
PDLIM5-210ENST00000508216 GPX2P18283 190 aa9.74□□□□□ -0.85
PDLIM5-210ENST00000508216 PTGER4P35408 488 aa9.74□□□□□ -0.85
PDLIM5-210ENST00000508216 LPAR6P43657 344 aa9.74□□□□□ -0.85
PDLIM5-210ENST00000508216 TFPI2P48307 235 aa9.74□□□□□ -0.85
PDLIM5-210ENST00000508216 CXCR3P49682 368 aa9.74□□□□□ -0.85
PDLIM5-210ENST00000508216 HIST1H3AP68431 136 aa9.74□□□□□ -0.85
PDLIM5-210ENST00000508216 HYAL1Q12794 435 aa9.74□□□□□ -0.85
PDLIM5-210ENST00000508216 RAB31Q13636 194 aa9.74□□□□□ -0.85
PDLIM5-210ENST00000508216 QRICH1Q2TAL8 776 aa9.74□□□□□ -0.85
PDLIM5-210ENST00000508216 TMEM249Q2WGJ8 235 aa9.74□□□□□ -0.85
PDLIM5-210ENST00000508216 CT45A2Q5DJT8 189 aa9.74□□□□□ -0.85
PDLIM5-210ENST00000508216 UBE2NLQ5JXB2 153 aa9.74□□□□□ -0.85
PDLIM5-210ENST00000508216 FAM71F2Q6NXP2 309 aa9.74□□□□□ -0.85
PDLIM5-210ENST00000508216 CEACAM20Q6UY09 585 aa9.74□□□□□ -0.85
PDLIM5-210ENST00000508216 Q6ZNB5 142 aa9.74□□□□□ -0.85
PDLIM5-210ENST00000508216 VTCN1Q7Z7D3 282 aa9.74□□□□□ -0.85
PDLIM5-210ENST00000508216 GALNT16Q8N428 558 aa9.74□□□□□ -0.85
PDLIM5-210ENST00000508216 STEAP2Q8NFT2 490 aa9.74□□□□□ -0.85
PDLIM5-210ENST00000508216 ZNF519Q8TB69 540 aa9.74□□□□□ -0.85
PDLIM5-210ENST00000508216 TMEM239Q8WW34 195 aa9.74□□□□□ -0.85
PDLIM5-210ENST00000508216 TMED6Q8WW62 240 aa9.74□□□□□ -0.85
PDLIM5-210ENST00000508216 MS4A6EQ96DS6 147 aa9.74□□□□□ -0.85
PDLIM5-210ENST00000508216 ALG12Q9BV10 488 aa9.74□□□□□ -0.85
PDLIM5-210ENST00000508216 DUSP16Q9BY84 665 aa9.74□□□□□ -0.85
PDLIM5-210ENST00000508216 TAS2R8Q9NYW2 309 aa9.74□□□□□ -0.85
PDLIM5-210ENST00000508216 OR6C3Q9NZP0 311 aa9.74□□□□□ -0.85
PDLIM5-210ENST00000508216 C2CD4BA6NLJ0 364 aa9.73□□□□□ -0.85
PDLIM5-210ENST00000508216 HEPACAM2A8MVW5 462 aa9.73□□□□□ -0.85
PDLIM5-210ENST00000508216 ETV2O00321 342 aaPredicted RBP9.73□□□□□ -0.85
PDLIM5-210ENST00000508216 DCTN6O00399 190 aa9.73□□□□□ -0.85
PDLIM5-210ENST00000508216 RBFOX2O43251 390 aaKnown RBP eCLIP9.73□□□□□ -0.85
PDLIM5-210ENST00000508216 TLX3O43711 291 aaPredicted RBP9.73□□□□□ -0.85
PDLIM5-210ENST00000508216 ERAL1O75616 437 aaKnown RBP9.73□□□□□ -0.85
PDLIM5-210ENST00000508216 TOX4O94842 621 aa9.73□□□□□ -0.85
PDLIM5-210ENST00000508216 DIRAS1O95057 198 aa9.73□□□□□ -0.85
PDLIM5-210ENST00000508216 BRI3O95415 125 aa9.73□□□□□ -0.85
PDLIM5-210ENST00000508216 IGSF6O95976 241 aa9.73□□□□□ -0.85
PDLIM5-210ENST00000508216 HLA-DQB2P05538 268 aa9.73□□□□□ -0.85
PDLIM5-210ENST00000508216 LIMS3P0CW19 117 aa9.73□□□□□ -0.85
PDLIM5-210ENST00000508216 LIMS4P0CW20 117 aa9.73□□□□□ -0.85
PDLIM5-210ENST00000508216 SMIM10L2AP0DMW4 78 aa9.73□□□□□ -0.85
PDLIM5-210ENST00000508216 SMIM10L2BP0DMW5 78 aa9.73□□□□□ -0.85
PDLIM5-210ENST00000508216 LYL1P12980 280 aa9.73□□□□□ -0.85
PDLIM5-210ENST00000508216 CTSSP25774 331 aa9.73□□□□□ -0.85
PDLIM5-210ENST00000508216 PSMB4P28070 264 aa9.73□□□□□ -0.85
PDLIM5-210ENST00000508216 CHATP28329 748 aa9.73□□□□□ -0.85
PDLIM5-210ENST00000508216 GLIPR1P48060 266 aa9.73□□□□□ -0.85
PDLIM5-210ENST00000508216 PNLIPRP1P54315 467 aa9.73□□□□□ -0.85
PDLIM5-210ENST00000508216 ERVPABLB-1P60509 514 aa9.73□□□□□ -0.85
PDLIM5-210ENST00000508216 SNRPD1P62314 119 aaKnown RBP9.73□□□□□ -0.85
PDLIM5-210ENST00000508216 SURF1Q15526 300 aa9.73□□□□□ -0.85
PDLIM5-210ENST00000508216 SYPL2Q5VXT5 272 aa9.73□□□□□ -0.85
PDLIM5-210ENST00000508216 ZNF770Q6IQ21 691 aaPredicted RBP9.73□□□□□ -0.85
PDLIM5-210ENST00000508216 MBOAT2Q6ZWT7 520 aa9.73□□□□□ -0.85
PDLIM5-210ENST00000508216 RPS27LQ71UM5 84 aaKnown RBP9.73□□□□□ -0.85
PDLIM5-210ENST00000508216 TAS1R1Q7RTX1 841 aa9.73□□□□□ -0.85
PDLIM5-210ENST00000508216 TSEN54Q7Z6J9 526 aaKnown RBP9.73□□□□□ -0.85
PDLIM5-210ENST00000508216 TMED4Q7Z7H5 227 aa9.73□□□□□ -0.85
PDLIM5-210ENST00000508216 LINC00346Q8IVM7 164 aa9.73□□□□□ -0.85
PDLIM5-210ENST00000508216 STPG4Q8N801 248 aa9.73□□□□□ -0.85
PDLIM5-210ENST00000508216 CYB561A3Q8NBI2 242 aa9.73□□□□□ -0.85
PDLIM5-210ENST00000508216 LFNGQ8NES3 379 aa9.73□□□□□ -0.85
PDLIM5-210ENST00000508216 OR4P4Q8NGL7 312 aa9.73□□□□□ -0.85
PDLIM5-210ENST00000508216 NDRG1Q92597 394 aaKnown RBP9.73□□□□□ -0.85
PDLIM5-210ENST00000508216 ZBTB8AQ96BR9 441 aa9.73□□□□□ -0.85
PDLIM5-210ENST00000508216 SFRP2Q96HF1 295 aa9.73□□□□□ -0.85
PDLIM5-210ENST00000508216 SLC25A21Q9BQT8 299 aaPredicted RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms